Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-229
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-237
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 184

Conread position: 1-245
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 1-256
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-273
Cow position:
Alignm length: 287
Alignm identity: 187
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-296
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 267

Conread position: 1-301
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 1-305
Cow position:
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 269

Conread position: 1-340
Cow position:
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-340
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-401
Cow position:
Alignm length: 408
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 115

Conread position: 1-401
Cow position:
Alignm length: 408
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 115

Conread position: 1-402
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 377

Conread position: 1-403
Cow position:
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-404
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 115

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 63

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 327

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 286

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 306

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 253

Conread position: 1-405
Cow position:
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 328

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 1-405
Cow position:
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 1-408
Cow position:
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 292

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 294

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 223

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 410

Conread position: 1-416
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 156

Conread position: 1-416
Cow position:
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 152

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 80

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 169

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 36

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 128

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 239

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 1-416
Cow position:
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 1-427
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 27

Conread position: 1-429
Cow position:
Alignm length: 451
Alignm identity: 290
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 111

Conread position: 1-436
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 1-444
Cow position:
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 1-451
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 1-466
Cow position:
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-468
Cow position:
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 34

Conread position: 2-400
Cow position:
Alignm length: 413
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 18

Conread position: 2-405
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 80

Conread position: 2-416
Cow position:
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 116

Conread position: 4-158
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 4-405
Cow position:
Alignm length: 413
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 4-416
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 221

Conread position: 22-405
Cow position:
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 231

Conread position: 31-416
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 147

Conread position: 44-435
Cow position:
Alignm length: 409
Alignm identity: 273
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 57, 13

Conread position: 66-389
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 172

Conread position: 66-389
Cow position:
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 172

Conread position: 70-416
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 78-405
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 188

Conread position: 89-468
Cow position:
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 143

Conread position: 90-466
Cow position:
Alignm length: 388
Alignm identity: 251
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 217

Conread position: 98-404
Cow position:
Alignm length: 315
Alignm identity: 212
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 39

Conread position: 98-418
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 24

Conread position: 112-338
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 25

Conread position: 128-416
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 214-405
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 217-405
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 226-468
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 36

Conread position: 233-416
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 30

Conread position: 276-468
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 152, 38

Conread position: 284-415
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.