Cow genome map
| Conread name: | Ss1.1-rcbl0_010689.5 |
| Conread position: | 1-155 |
| Cow position: | chr3:57900980-57901139 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-169 |
| Cow position: | chr3:56650504-56650331 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-175 |
| Cow position: | chr3:39326452-39326631 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 1-225 |
| Cow position: | chr3:63005384-63005144 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 1-274 |
| Cow position: | chr3:37968845-37969130 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-276 |
| Cow position: | chr3:63241970-63241702 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 1-310 |
| Cow position: | chr3:46678148-46677826 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-312 |
| Cow position: | chr3:54864933-54864610 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 1-312 |
| Cow position: | chr3:57856501-57856826 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-316 |
| Cow position: | chr3:49333164-49333483 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 1-323 |
| Cow position: | chr3:38866166-38866494 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 1-339 |
| Cow position: | chr3:17775863-17776201 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 1-340 |
| Cow position: | chr3:17828885-17828532 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-341 |
| Cow position: | chr3:32146326-32145973 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 327 |
| Conread position: | 1-346 |
| Cow position: | chr3:43039928-43039582 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 1-356 |
| Cow position: | chr3:5047419-5047051 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 1-370 |
| Cow position: | chr3:23291640-23291256 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 1-371 |
| Cow position: | chr3:15989271-15988879 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-374 |
| Cow position: | chr3:18357121-18356736 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-374 |
| Cow position: | chr3:66990568-66990937 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 1-379 |
| Cow position: | chr3:50915070-50915462 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 137 |
| Conread position: | 1-389 |
| Cow position: | chr3:19943829-19944216 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 1-390 |
| Cow position: | chr3:5883306-5883706 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 1-391 |
| Cow position: | chr3:70083881-70083486 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 1-396 |
| Cow position: | chr3:10239413-10239822 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-397 |
| Cow position: | chr3:17898267-17898659 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 157, 89 |
| Conread position: | 1-401 |
| Cow position: | chr3:56340659-56340249 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 1-401 |
| Cow position: | chr3:64650396-64650804 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 1-403 |
| Cow position: | chr3:3806120-3806507 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 1-403 |
| Cow position: | chr3:50128114-50127699 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 1-403 |
| Cow position: | chr3:58947220-58947637 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 410 |
| Conread position: | 1-405 |
| Cow position: | chr3:6782152-6782566 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-405 |
| Cow position: | chr3:7158966-7158551 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 137 |
| Conread position: | 1-405 |
| Cow position: | chr3:7168560-7168974 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 116 |
| Conread position: | 1-405 |
| Cow position: | chr3:18859184-18859596 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 225 |
| Conread position: | 1-405 |
| Cow position: | chr3:19878427-19878840 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr3:19938678-19939066 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 151 |
| Conread position: | 1-405 |
| Cow position: | chr3:22335657-22336070 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 235 |
| Conread position: | 1-405 |
| Cow position: | chr3:36117440-36117845 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 245 |
| Conread position: | 1-405 |
| Cow position: | chr3:40823153-40823569 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 187 |
| Conread position: | 1-405 |
| Cow position: | chr3:41211973-41211555 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 327 |
| Conread position: | 1-405 |
| Cow position: | chr3:42432000-42432413 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 1-405 |
| Cow position: | chr3:45032506-45032923 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr3:46861533-46861121 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 1-405 |
| Cow position: | chr3:49614212-49613795 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 1-405 |
| Cow position: | chr3:56321082-56321497 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 1-405 |
| Cow position: | chr3:64028321-64027904 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 257 |
| Conread position: | 1-405 |
| Cow position: | chr3:72629833-72630252 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-405 |
| Cow position: | chr3:75041402-75040988 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 185 |
| Conread position: | 1-408 |
| Cow position: | chr3:47081893-47081473 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 1-408 |
| Cow position: | chr3:66891197-66890778 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 268 |
| Conread position: | 1-412 |
| Cow position: | chr3:3522779-3523210 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-415 |
| Cow position: | chr3:24314243-24314661 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 197 |
| Conread position: | 1-415 |
| Cow position: | chr3:42630778-42631204 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 53, 233 |
| Conread position: | 1-415 |
| Cow position: | chr3:47179439-47179011 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 258 |
| Conread position: | 1-415 |
| Cow position: | chr3:59861130-59861558 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr3:207395-206968 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 1-416 |
| Cow position: | chr3:594343-594769 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 1-416 |
| Cow position: | chr3:2633693-2634113 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 272 |
| Conread position: | 1-416 |
| Cow position: | chr3:2653872-2654295 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 360 |
| Conread position: | 1-416 |
| Cow position: | chr3:5829864-5829436 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 306 |
| Conread position: | 1-416 |
| Cow position: | chr3:9716578-9717003 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 276 |
| Conread position: | 1-416 |
| Cow position: | chr3:18463821-18463396 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 290 |
| Conread position: | 1-416 |
| Cow position: | chr3:18542643-18542215 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr3:18811267-18811693 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 398 |
| Conread position: | 1-416 |
| Cow position: | chr3:19757195-19756766 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr3:21182920-21182494 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 111 |
| Conread position: | 1-416 |
| Cow position: | chr3:31354492-31354072 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 141 |
| Conread position: | 1-416 |
| Cow position: | chr3:31898207-31897784 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 1-416 |
| Cow position: | chr3:34031132-34030706 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 1-416 |
| Cow position: | chr3:34396288-34395889 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 1-416 |
| Cow position: | chr3:36882150-36881729 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 1-416 |
| Cow position: | chr3:53515383-53515806 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 112 |
| Conread position: | 1-416 |
| Cow position: | chr3:55229929-55229508 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 1-416 |
| Cow position: | chr3:57484959-57484537 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 1-416 |
| Cow position: | chr3:57499753-57499353 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 1-416 |
| Cow position: | chr3:64017599-64017172 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 393 |
| Conread position: | 1-416 |
| Cow position: | chr3:66119421-66119848 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-416 |
| Cow position: | chr3:66638504-66638933 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 343 |
| Conread position: | 1-416 |
| Cow position: | chr3:69933162-69933587 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 1-416 |
| Cow position: | chr3:77474525-77474955 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 1-416 |
| Cow position: | chr3:78027646-78027217 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 327 |
| Conread position: | 1-417 |
| Cow position: | chr3:472298-472726 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-417 |
| Cow position: | chr3:54783305-54783737 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 223 |
| Conread position: | 1-433 |
| Cow position: | chr3:56097300-56097730 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 1-435 |
| Cow position: | chr3:14754531-14754086 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 1-435 |
| Cow position: | chr3:15178075-15178522 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 1-436 |
| Cow position: | chr3:32842662-32842235 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 1-437 |
| Cow position: | chr3:26949279-26949729 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 1-437 |
| Cow position: | chr3:36098940-36098504 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 203 |
| Conread position: | 1-444 |
| Cow position: | chr3:45869445-45868995 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 1-444 |
| Cow position: | chr3:51940650-51940203 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 1-446 |
| Cow position: | chr3:29594968-29595418 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 29 |
| Conread position: | 1-451 |
| Cow position: | chr3:21305401-21304953 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 1-465 |
| Cow position: | chr3:4285650-4286128 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-468 |
| Cow position: | chr3:4027038-4027520 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-468 |
| Cow position: | chr3:19802424-19802895 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 191 |
| Conread position: | 1-468 |
| Cow position: | chr3:24591862-24591387 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 1-468 |
| Cow position: | chr3:45775310-45774852 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 1-468 |
| Cow position: | chr3:60210413-60209941 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 65, 115 |
| Conread position: | 1-468 |
| Cow position: | chr3:64358401-64357922 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 225 |
| Conread position: | 2-251 |
| Cow position: | chr3:14634346-14634084 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 151 |
| Conread position: | 2-344 |
| Cow position: | chr3:29327214-29326860 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 2-413 |
| Cow position: | chr3:42580200-42579779 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 2-416 |
| Cow position: | chr3:5954422-5953993 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 2-416 |
| Cow position: | chr3:48061064-48060639 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 2-417 |
| Cow position: | chr3:5995932-5995503 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 189 |
| Conread position: | 2-429 |
| Cow position: | chr3:36127156-36127599 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 91 |
| Conread position: | 2-437 |
| Cow position: | chr3:53410682-53411115 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 285 |
| Conread position: | 2-447 |
| Cow position: | chr3:2711195-2710738 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 2-468 |
| Cow position: | chr3:3980151-3980631 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 2-468 |
| Cow position: | chr3:6685226-6685696 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 3-402 |
| Cow position: | chr3:66619945-66620351 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 3-405 |
| Cow position: | chr3:2917229-2917643 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 3-418 |
| Cow position: | chr3:54785531-54785949 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 3-447 |
| Cow position: | chr3:28929868-28929422 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 6-401 |
| Cow position: | chr3:18729362-18728962 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 89 |
| Conread position: | 10-347 |
| Cow position: | chr3:65583843-65583484 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 12-405 |
| Cow position: | chr3:32623247-32622855 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 187 |
| Conread position: | 16-401 |
| Cow position: | chr3:20871597-20871208 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 20-402 |
| Cow position: | chr3:30314350-30314745 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 23-468 |
| Cow position: | chr3:48231208-48230759 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 31-438 |
| Cow position: | chr3:3054397-3054812 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 33-450 |
| Cow position: | chr3:16072948-16073355 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 39-391 |
| Cow position: | chr3:16866976-16866605 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 43-396 |
| Cow position: | chr3:30929466-30929815 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 46-401 |
| Cow position: | chr3:19722804-19722445 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 86 |
| Conread position: | 50-398 |
| Cow position: | chr3:56395931-56396288 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 53-416 |
| Cow position: | chr3:26822674-26822316 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 64-418 |
| Cow position: | chr3:34093613-34093254 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 64-468 |
| Cow position: | chr3:52864641-52864223 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 66-416 |
| Cow position: | chr3:23214229-23213869 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 146 |
| Conread position: | 82-410 |
| Cow position: | chr3:14439911-14439574 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 89-405 |
| Cow position: | chr3:49137683-49137358 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 90-396 |
| Cow position: | chr3:83234268-83233956 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 228 |
| Conread position: | 90-468 |
| Cow position: | chr3:39326576-39326963 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 28 |
| Conread position: | 92-383 |
| Cow position: | chr3:13518421-13518134 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 73, 186 |
| Conread position: | 92-414 |
| Cow position: | chr3:39279182-39279511 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 96-416 |
| Cow position: | chr3:49677651-49677979 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 136 |
| Conread position: | 98-289 |
| Cow position: | chr3:42602470-42602653 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 112-389 |
| Cow position: | chr3:2908467-2908191 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 112-452 |
| Cow position: | chr3:32618037-32617695 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 116-395 |
| Cow position: | chr3:40157621-40157334 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 137 |
| Conread position: | 116-410 |
| Cow position: | chr3:6660115-6660409 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 117-405 |
| Cow position: | chr3:49545322-49545025 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 117-416 |
| Cow position: | chr3:45895673-45895365 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 117-416 |
| Cow position: | chr3:45974382-45974690 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 128-418 |
| Cow position: | chr3:19891084-19890793 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 131-405 |
| Cow position: | chr3:68700070-68699791 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 157 |
| Conread position: | 131-405 |
| Cow position: | chr3:68873848-68873573 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 154-412 |
| Cow position: | chr3:77423607-77423863 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 175-417 |
| Cow position: | chr3:49162647-49162887 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 191-431 |
| Cow position: | chr3:77442852-77443084 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 231, 24 |
| Conread position: | 193-398 |
| Cow position: | chr3:42688567-42688770 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 194-405 |
| Cow position: | chr3:36864388-36864177 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-438 |
| Cow position: | chr3:24642764-24642999 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 225-468 |
| Cow position: | chr3:26837760-26837520 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 197, 37 |
| Conread position: | 230-437 |
| Cow position: | chr3:63004726-63004520 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 169 |
| Conread position: | 235-435 |
| Cow position: | chr3:29331265-29331065 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 244-444 |
| Cow position: | chr3:14632677-14632477 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 179, 111 |
| Conread position: | 253-405 |
| Cow position: | chr3:53713079-53713230 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 253-416 |
| Cow position: | chr3:7481201-7481039 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 265-405 |
| Cow position: | chr3:40340070-40339930 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.