Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-155
Cow position: chr3:57900980-57901139 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 1-169
Cow position: chr3:56650504-56650331 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-175
Cow position: chr3:39326452-39326631 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 147

Conread position: 1-225
Cow position: chr3:63005384-63005144 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 49, 160

Conread position: 1-274
Cow position: chr3:37968845-37969130 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-276
Cow position: chr3:63241970-63241702 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 49

Conread position: 1-310
Cow position: chr3:46678148-46677826 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-312
Cow position: chr3:54864933-54864610 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 1-312
Cow position: chr3:57856501-57856826 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-316
Cow position: chr3:49333164-49333483 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 212
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 103

Conread position: 1-323
Cow position: chr3:38866166-38866494 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 68

Conread position: 1-339
Cow position: chr3:17775863-17776201 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 53, 138

Conread position: 1-340
Cow position: chr3:17828885-17828532 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-341
Cow position: chr3:32146326-32145973 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 327

Conread position: 1-346
Cow position: chr3:43039928-43039582 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 101

Conread position: 1-356
Cow position: chr3:5047419-5047051 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 1-370
Cow position: chr3:23291640-23291256 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 1-371
Cow position: chr3:15989271-15988879 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-374
Cow position: chr3:18357121-18356736 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-374
Cow position: chr3:66990568-66990937 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 1-379
Cow position: chr3:50915070-50915462 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 1-389
Cow position: chr3:19943829-19944216 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-390
Cow position: chr3:5883306-5883706 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 1-391
Cow position: chr3:70083881-70083486 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 1-396
Cow position: chr3:10239413-10239822 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-397
Cow position: chr3:17898267-17898659 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 266
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 89

Conread position: 1-401
Cow position: chr3:56340659-56340249 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-401
Cow position: chr3:64650396-64650804 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-403
Cow position: chr3:3806120-3806507 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-403
Cow position: chr3:50128114-50127699 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 1-403
Cow position: chr3:58947220-58947637 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 410

Conread position: 1-405
Cow position: chr3:6782152-6782566 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-405
Cow position: chr3:7158966-7158551 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 1-405
Cow position: chr3:7168560-7168974 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-405
Cow position: chr3:18859184-18859596 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 225

Conread position: 1-405
Cow position: chr3:19878427-19878840 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position: chr3:19938678-19939066 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 151

Conread position: 1-405
Cow position: chr3:22335657-22336070 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 235

Conread position: 1-405
Cow position: chr3:36117440-36117845 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 245

Conread position: 1-405
Cow position: chr3:40823153-40823569 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 1-405
Cow position: chr3:41211973-41211555 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 327

Conread position: 1-405
Cow position: chr3:42432000-42432413 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 1-405
Cow position: chr3:45032506-45032923 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position: chr3:46861533-46861121 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 1-405
Cow position: chr3:49614212-49613795 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 63

Conread position: 1-405
Cow position: chr3:56321082-56321497 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 1-405
Cow position: chr3:64028321-64027904 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 257

Conread position: 1-405
Cow position: chr3:72629833-72630252 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position: chr3:75041402-75040988 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 185

Conread position: 1-408
Cow position: chr3:47081893-47081473 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 63

Conread position: 1-408
Cow position: chr3:66891197-66890778 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 268

Conread position: 1-412
Cow position: chr3:3522779-3523210 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-415
Cow position: chr3:24314243-24314661 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 197

Conread position: 1-415
Cow position: chr3:42630778-42631204 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 280
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 53, 233

Conread position: 1-415
Cow position: chr3:47179439-47179011 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 258

Conread position: 1-415
Cow position: chr3:59861130-59861558 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position: chr3:207395-206968 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 1-416
Cow position: chr3:594343-594769 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-416
Cow position: chr3:2633693-2634113 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 272

Conread position: 1-416
Cow position: chr3:2653872-2654295 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 360

Conread position: 1-416
Cow position: chr3:5829864-5829436 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 306

Conread position: 1-416
Cow position: chr3:9716578-9717003 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 276

Conread position: 1-416
Cow position: chr3:18463821-18463396 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 290

Conread position: 1-416
Cow position: chr3:18542643-18542215 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position: chr3:18811267-18811693 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 398

Conread position: 1-416
Cow position: chr3:19757195-19756766 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position: chr3:21182920-21182494 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 1-416
Cow position: chr3:31354492-31354072 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 141

Conread position: 1-416
Cow position: chr3:31898207-31897784 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 83

Conread position: 1-416
Cow position: chr3:34031132-34030706 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-416
Cow position: chr3:34396288-34395889 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 53

Conread position: 1-416
Cow position: chr3:36882150-36881729 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 1-416
Cow position: chr3:53515383-53515806 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 112

Conread position: 1-416
Cow position: chr3:55229929-55229508 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 81

Conread position: 1-416
Cow position: chr3:57484959-57484537 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 1-416
Cow position: chr3:57499753-57499353 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 1-416
Cow position: chr3:64017599-64017172 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 393

Conread position: 1-416
Cow position: chr3:66119421-66119848 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position: chr3:66638504-66638933 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 343

Conread position: 1-416
Cow position: chr3:69933162-69933587 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-416
Cow position: chr3:77474525-77474955 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 1-416
Cow position: chr3:78027646-78027217 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 327

Conread position: 1-417
Cow position: chr3:472298-472726 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-417
Cow position: chr3:54783305-54783737 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 223

Conread position: 1-433
Cow position: chr3:56097300-56097730 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 295
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 92

Conread position: 1-435
Cow position: chr3:14754531-14754086 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 71

Conread position: 1-435
Cow position: chr3:15178075-15178522 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 73

Conread position: 1-436
Cow position: chr3:32842662-32842235 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 1-437
Cow position: chr3:26949279-26949729 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 1-437
Cow position: chr3:36098940-36098504 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 292
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 203

Conread position: 1-444
Cow position: chr3:45869445-45868995 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 1-444
Cow position: chr3:51940650-51940203 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 1-446
Cow position: chr3:29594968-29595418 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 29

Conread position: 1-451
Cow position: chr3:21305401-21304953 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 309
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 53, 17

Conread position: 1-465
Cow position: chr3:4285650-4286128 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-468
Cow position: chr3:4027038-4027520 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-468
Cow position: chr3:19802424-19802895 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 191

Conread position: 1-468
Cow position: chr3:24591862-24591387 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 1-468
Cow position: chr3:45775310-45774852 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 303
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 51

Conread position: 1-468
Cow position: chr3:60210413-60209941 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 115

Conread position: 1-468
Cow position: chr3:64358401-64357922 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 225

Conread position: 2-251
Cow position: chr3:14634346-14634084 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 151

Conread position: 2-344
Cow position: chr3:29327214-29326860 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 14

Conread position: 2-413
Cow position: chr3:42580200-42579779 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 137

Conread position: 2-416
Cow position: chr3:5954422-5953993 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 2-416
Cow position: chr3:48061064-48060639 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 2-417
Cow position: chr3:5995932-5995503 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 189

Conread position: 2-429
Cow position: chr3:36127156-36127599 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 91

Conread position: 2-437
Cow position: chr3:53410682-53411115 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 285

Conread position: 2-447
Cow position: chr3:2711195-2710738 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 2-468
Cow position: chr3:3980151-3980631 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 2-468
Cow position: chr3:6685226-6685696 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 3-402
Cow position: chr3:66619945-66620351 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 139

Conread position: 3-405
Cow position: chr3:2917229-2917643 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-418
Cow position: chr3:54785531-54785949 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 134

Conread position: 3-447
Cow position: chr3:28929868-28929422 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 289
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 81

Conread position: 6-401
Cow position: chr3:18729362-18728962 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 89

Conread position: 10-347
Cow position: chr3:65583843-65583484 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 78

Conread position: 12-405
Cow position: chr3:32623247-32622855 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 187

Conread position: 16-401
Cow position: chr3:20871597-20871208 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 253
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 68

Conread position: 20-402
Cow position: chr3:30314350-30314745 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 23-468
Cow position: chr3:48231208-48230759 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 61

Conread position: 31-438
Cow position: chr3:3054397-3054812 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 23

Conread position: 33-450
Cow position: chr3:16072948-16073355 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 281
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 51

Conread position: 39-391
Cow position: chr3:16866976-16866605 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 7

Conread position: 43-396
Cow position: chr3:30929466-30929815 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 91

Conread position: 46-401
Cow position: chr3:19722804-19722445 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 86

Conread position: 50-398
Cow position: chr3:56395931-56396288 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 9, 56

Conread position: 53-416
Cow position: chr3:26822674-26822316 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 64-418
Cow position: chr3:34093613-34093254 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 24

Conread position: 64-468
Cow position: chr3:52864641-52864223 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 66-416
Cow position: chr3:23214229-23213869 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 146

Conread position: 82-410
Cow position: chr3:14439911-14439574 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 89-405
Cow position: chr3:49137683-49137358 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 90-396
Cow position: chr3:83234268-83233956 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 228

Conread position: 90-468
Cow position: chr3:39326576-39326963 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 28

Conread position: 92-383
Cow position: chr3:13518421-13518134 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 186

Conread position: 92-414
Cow position: chr3:39279182-39279511 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 15

Conread position: 96-416
Cow position: chr3:49677651-49677979 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 136

Conread position: 98-289
Cow position: chr3:42602470-42602653 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 20

Conread position: 112-389
Cow position: chr3:2908467-2908191 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 11

Conread position: 112-452
Cow position: chr3:32618037-32617695 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 55

Conread position: 116-395
Cow position: chr3:40157621-40157334 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 137

Conread position: 116-410
Cow position: chr3:6660115-6660409 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 42

Conread position: 117-405
Cow position: chr3:49545322-49545025 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 117-416
Cow position: chr3:45895673-45895365 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 117-416
Cow position: chr3:45974382-45974690 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 128-418
Cow position: chr3:19891084-19890793 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 89

Conread position: 131-405
Cow position: chr3:68700070-68699791 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 157

Conread position: 131-405
Cow position: chr3:68873848-68873573 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 154-412
Cow position: chr3:77423607-77423863 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 109

Conread position: 175-417
Cow position: chr3:49162647-49162887 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 84

Conread position: 191-431
Cow position: chr3:77442852-77443084 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 231, 24

Conread position: 193-398
Cow position: chr3:42688567-42688770 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 123

Conread position: 194-405
Cow position: chr3:36864388-36864177 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 195-438
Cow position: chr3:24642764-24642999 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 123

Conread position: 225-468
Cow position: chr3:26837760-26837520 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 197, 37

Conread position: 230-437
Cow position: chr3:63004726-63004520 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 169

Conread position: 235-435
Cow position: chr3:29331265-29331065 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 244-444
Cow position: chr3:14632677-14632477 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 179, 111

Conread position: 253-405
Cow position: chr3:53713079-53713230 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 253-416
Cow position: chr3:7481201-7481039 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 265-405
Cow position: chr3:40340070-40339930 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.