Cow genome map
Conread name: | Ss1.1-rcbl0_010689.5 |
Conread position: | 1-124 |
Cow position: | chr4:12607936-12607808 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 116 |
Conread position: | 1-126 |
Cow position: | chr4:10408350-10408480 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-126 |
Cow position: | chr4:23114607-23114477 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-239 |
Cow position: | chr4:31668883-31669129 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 54, 135 |
Conread position: | 1-243 |
Cow position: | chr4:1371445-1371179 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 194 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-259 |
Cow position: | chr4:21564715-21564961 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 186 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 52, 122 |
Conread position: | 1-282 |
Cow position: | chr4:33493381-33493672 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 127 |
Conread position: | 1-312 |
Cow position: | chr4:496373-496064 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 223 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 53, 36 |
Conread position: | 1-362 |
Cow position: | chr4:4905723-4906090 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 1-366 |
Cow position: | chr4:4176006-4176377 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 240 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 53, 142 |
Conread position: | 1-370 |
Cow position: | chr4:39272371-39271985 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 359 |
Conread position: | 1-382 |
Cow position: | chr4:1464359-1463961 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 279 |
Conread position: | 1-385 |
Cow position: | chr4:528562-528960 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-389 |
Cow position: | chr4:29532145-29531744 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 257 |
Conread position: | 1-396 |
Cow position: | chr4:3961161-3961569 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-402 |
Cow position: | chr4:158084-158499 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-402 |
Cow position: | chr4:25600043-25599635 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 27 |
Conread position: | 1-405 |
Cow position: | chr4:101360-100946 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 135 |
Conread position: | 1-405 |
Cow position: | chr4:355480-355896 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 289 |
Conread position: | 1-405 |
Cow position: | chr4:602563-602980 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr4:1931051-1930637 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 29 |
Conread position: | 1-405 |
Cow position: | chr4:3125350-3125782 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 111 |
Conread position: | 1-405 |
Cow position: | chr4:5879740-5880152 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 225 |
Conread position: | 1-405 |
Cow position: | chr4:13547597-13548016 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr4:18424951-18424538 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 185 |
Conread position: | 1-405 |
Cow position: | chr4:30307883-30307472 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 101 |
Conread position: | 1-405 |
Cow position: | chr4:33073528-33073123 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 1-405 |
Cow position: | chr4:43880678-43881095 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 271 |
Conread position: | 1-405 |
Cow position: | chr4:44724652-44725070 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-405 |
Cow position: | chr4:47764601-47764184 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 301 |
Conread position: | 1-405 |
Cow position: | chr4:65223965-65223547 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-406 |
Cow position: | chr4:32211736-32212155 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-408 |
Cow position: | chr4:24445630-24445217 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 92 |
Conread position: | 1-408 |
Cow position: | chr4:27333012-27333425 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 260 |
Conread position: | 1-414 |
Cow position: | chr4:26887274-26886869 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 114 |
Conread position: | 1-416 |
Cow position: | chr4:6490777-6490367 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 114 |
Conread position: | 1-416 |
Cow position: | chr4:16359456-16359881 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 42 |
Conread position: | 1-416 |
Cow position: | chr4:17926685-17926257 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-416 |
Cow position: | chr4:36895943-36896365 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 251 |
Conread position: | 1-416 |
Cow position: | chr4:45049730-45049301 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 356 |
Conread position: | 1-416 |
Cow position: | chr4:47718038-47717609 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 283 |
Conread position: | 1-416 |
Cow position: | chr4:57979200-57979625 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 352 |
Conread position: | 1-416 |
Cow position: | chr4:66179419-66178990 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-416 |
Cow position: | chr4:66925574-66925995 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 99 |
Conread position: | 1-417 |
Cow position: | chr4:6269059-6268629 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 359 |
Conread position: | 1-417 |
Cow position: | chr4:12241650-12241219 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-435 |
Cow position: | chr4:11393767-11393328 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 219 |
Conread position: | 1-444 |
Cow position: | chr4:13492145-13492597 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 296 |
Conread position: | 1-468 |
Cow position: | chr4:28830609-28831073 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 1-468 |
Cow position: | chr4:34185294-34184838 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 27 |
Conread position: | 1-468 |
Cow position: | chr4:46663771-46664243 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 24 |
Conread position: | 2-402 |
Cow position: | chr4:16056174-16056585 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 125 |
Conread position: | 2-416 |
Cow position: | chr4:11618431-11618848 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 26 |
Conread position: | 2-416 |
Cow position: | chr4:18516466-18516894 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 2-416 |
Cow position: | chr4:41331010-41331436 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 135 |
Conread position: | 2-416 |
Cow position: | chr4:43320066-43319649 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 235 |
Conread position: | 2-416 |
Cow position: | chr4:48025971-48026394 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 11 |
Conread position: | 2-451 |
Cow position: | chr4:1497183-1496728 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 306 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 7, 86 |
Conread position: | 2-466 |
Cow position: | chr4:17530850-17530383 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 306 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 52, 110 |
Conread position: | 3-468 |
Cow position: | chr4:21338417-21337956 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 25 |
Conread position: | 6-429 |
Cow position: | chr4:40824671-40824242 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 274 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 48, 123 |
Conread position: | 7-363 |
Cow position: | chr4:62565563-62565923 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 244 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 8-396 |
Cow position: | chr4:41119590-41119991 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 9 |
Conread position: | 9-468 |
Cow position: | chr4:60264983-60264517 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 19 |
Conread position: | 10-420 |
Cow position: | chr4:51044313-51043931 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 288 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 44, 124 |
Conread position: | 21-330 |
Cow position: | chr4:6214963-6214647 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 212 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 33, 117 |
Conread position: | 21-413 |
Cow position: | chr4:969449-969048 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 273 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 33, 119 |
Conread position: | 21-413 |
Cow position: | chr4:22471778-22472163 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 255 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 33, 10 |
Conread position: | 37-444 |
Cow position: | chr4:8598543-8598133 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 91 |
Conread position: | 42-340 |
Cow position: | chr4:15263376-15263068 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 205 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 59, 12 |
Conread position: | 53-316 |
Cow position: | chr4:23493370-23493635 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 196 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 30, 76 |
Conread position: | 92-405 |
Cow position: | chr4:12586963-12587285 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 99-402 |
Cow position: | chr4:61256568-61256875 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 189 |
Conread position: | 125-405 |
Cow position: | chr4:9355073-9354784 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 142-413 |
Cow position: | chr4:54157725-54157988 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 186 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 157-303 |
Cow position: | chr4:24198482-24198329 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 191-331 |
Cow position: | chr4:27443227-27443370 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 191-450 |
Cow position: | chr4:11384732-11384989 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 123 |
Conread position: | 193-450 |
Cow position: | chr4:15193826-15194083 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 173 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 127 |
Conread position: | 194-405 |
Cow position: | chr4:9587039-9587250 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 219-416 |
Cow position: | chr4:10408479-10408671 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 151 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 107, 7 |
Conread position: | 223-405 |
Cow position: | chr4:4415887-4416069 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 248-444 |
Cow position: | chr4:31565475-31565274 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 254-405 |
Cow position: | chr4:41954308-41954461 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 254-405 |
Cow position: | chr4:41957963-41958116 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 267-405 |
Cow position: | chr4:18190255-18190392 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 271-415 |
Cow position: | chr4:31669122-31669268 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.