Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-124
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 116

Conread position: 1-126
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 1-126
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-239
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 135

Conread position: 1-243
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-259
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 122

Conread position: 1-282
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 127

Conread position: 1-312
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 36

Conread position: 1-362
Cow position:
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-366
Cow position:
Alignm length: 377
Alignm identity: 240
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 142

Conread position: 1-370
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 359

Conread position: 1-382
Cow position:
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 279

Conread position: 1-385
Cow position:
Alignm length: 399
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-389
Cow position:
Alignm length: 403
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 257

Conread position: 1-396
Cow position:
Alignm length: 409
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-402
Cow position:
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 289

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 29

Conread position: 1-405
Cow position:
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 111

Conread position: 1-405
Cow position:
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 225

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 185

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 271

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 301

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-406
Cow position:
Alignm length: 420
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-408
Cow position:
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 1-408
Cow position:
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 260

Conread position: 1-414
Cow position:
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 1-416
Cow position:
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 251

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 356

Conread position: 1-416
Cow position:
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 283

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 352

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 1-417
Cow position:
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 359

Conread position: 1-417
Cow position:
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-435
Cow position:
Alignm length: 449
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 219

Conread position: 1-444
Cow position:
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 296

Conread position: 1-468
Cow position:
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 99

Conread position: 1-468
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 1-468
Cow position:
Alignm length: 483
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 2-402
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 125

Conread position: 2-416
Cow position:
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 26

Conread position: 2-416
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 2-416
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 135

Conread position: 2-416
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 235

Conread position: 2-416
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 2-451
Cow position:
Alignm length: 464
Alignm identity: 306
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 86

Conread position: 2-466
Cow position:
Alignm length: 477
Alignm identity: 306
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 110

Conread position: 3-468
Cow position:
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 6-429
Cow position:
Alignm length: 434
Alignm identity: 274
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 123

Conread position: 7-363
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 27

Conread position: 8-396
Cow position:
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 9

Conread position: 9-468
Cow position:
Alignm length: 475
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 10-420
Cow position:
Alignm length: 417
Alignm identity: 288
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 44, 124

Conread position: 21-330
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 117

Conread position: 21-413
Cow position:
Alignm length: 408
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 119

Conread position: 21-413
Cow position:
Alignm length: 399
Alignm identity: 255
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 10

Conread position: 37-444
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 42-340
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 12

Conread position: 53-316
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 76

Conread position: 92-405
Cow position:
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 99-402
Cow position:
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 189

Conread position: 125-405
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 142-413
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 157-303
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 191-331
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 191-450
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 123

Conread position: 193-450
Cow position:
Alignm length: 264
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 127

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 219-416
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 107, 7

Conread position: 223-405
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 248-444
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 254-405
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 254-405
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 267-405
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 271-415
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.