Cow genome map
| Conread name: | Ss1.1-rcbl0_010689.5 |
| Conread position: | 1-217 |
| Cow position: | chr5:10844211-10843981 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-240 |
| Cow position: | chr5:46005720-46005460 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-246 |
| Cow position: | chr5:53714917-53715176 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-291 |
| Cow position: | chr5:57366358-57366057 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 225 |
| Conread position: | 1-302 |
| Cow position: | chr5:25207078-25206762 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 277 |
| Conread position: | 1-305 |
| Cow position: | chr5:18665625-18665940 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 297 |
| Conread position: | 1-308 |
| Cow position: | chr5:4088468-4088789 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-367 |
| Cow position: | chr5:1342130-1341755 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 291 |
| Conread position: | 1-373 |
| Cow position: | chr5:61273516-61273138 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 255 |
| Conread position: | 1-374 |
| Cow position: | chr5:3504583-3504200 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 1-383 |
| Cow position: | chr5:61020185-61019790 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 1-387 |
| Cow position: | chr5:31101932-31101548 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 1-391 |
| Cow position: | chr5:24329962-24330341 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 1-396 |
| Cow position: | chr5:64782353-64781946 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-398 |
| Cow position: | chr5:14346710-14346305 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 1-401 |
| Cow position: | chr5:2430469-2430055 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-401 |
| Cow position: | chr5:54932554-54932141 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 138 |
| Conread position: | 1-402 |
| Cow position: | chr5:45182446-45182025 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-402 |
| Cow position: | chr5:46775752-46776158 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 1-403 |
| Cow position: | chr5:26769474-26769883 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 276 |
| Conread position: | 1-405 |
| Cow position: | chr5:2530934-2531352 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:6589358-6588939 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:14379826-14380243 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 377 |
| Conread position: | 1-405 |
| Cow position: | chr5:24576577-24576996 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:27909607-27909191 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:28031148-28031558 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 1-405 |
| Cow position: | chr5:30578986-30579403 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:31706238-31706655 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 191 |
| Conread position: | 1-405 |
| Cow position: | chr5:32733581-32733171 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 1-405 |
| Cow position: | chr5:32772145-32772563 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:37732009-37732427 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:44459146-44459564 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:47831441-47831032 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 239 |
| Conread position: | 1-405 |
| Cow position: | chr5:48468613-48468198 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr5:49518327-49518739 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 1-405 |
| Cow position: | chr5:59060284-59060699 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 252 |
| Conread position: | 1-412 |
| Cow position: | chr5:32674079-32673652 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 1-413 |
| Cow position: | chr5:41359065-41358657 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 1-415 |
| Cow position: | chr5:26079555-26079127 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-415 |
| Cow position: | chr5:29042175-29042602 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 266 |
| Conread position: | 1-415 |
| Cow position: | chr5:46644364-46644780 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 1-416 |
| Cow position: | chr5:416059-415630 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr5:2914114-2914540 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 354 |
| Conread position: | 1-416 |
| Cow position: | chr5:3785472-3785877 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 1-416 |
| Cow position: | chr5:24098312-24098741 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr5:27569814-27570203 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 253, 54 |
| Conread position: | 1-416 |
| Cow position: | chr5:27652314-27651890 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 1-416 |
| Cow position: | chr5:28006869-28007282 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 1-416 |
| Cow position: | chr5:29009023-29009445 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 116 |
| Conread position: | 1-416 |
| Cow position: | chr5:32945544-32945966 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 1-416 |
| Cow position: | chr5:34202610-34203027 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 1-416 |
| Cow position: | chr5:34696248-34696695 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 1-416 |
| Cow position: | chr5:39165134-39164708 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 1-416 |
| Cow position: | chr5:41551261-41550834 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 1-416 |
| Cow position: | chr5:48809052-48808623 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr5:49119618-49119189 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-416 |
| Cow position: | chr5:49181937-49182361 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 1-416 |
| Cow position: | chr5:54792954-54792543 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 1-416 |
| Cow position: | chr5:57482883-57482454 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-433 |
| Cow position: | chr5:53627095-53626656 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 1-437 |
| Cow position: | chr5:3964134-3964572 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 1-437 |
| Cow position: | chr5:41962571-41962124 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 1-444 |
| Cow position: | chr5:26069050-26068609 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 1-450 |
| Cow position: | chr5:10918461-10918924 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 401 |
| Conread position: | 1-468 |
| Cow position: | chr5:25000985-25000505 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 1-468 |
| Cow position: | chr5:41529908-41529445 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 1-468 |
| Cow position: | chr5:46659395-46659861 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 1-468 |
| Cow position: | chr5:49593792-49593310 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 2-272 |
| Cow position: | chr5:7273525-7273801 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 2-401 |
| Cow position: | chr5:51319579-51319175 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 2-405 |
| Cow position: | chr5:4019534-4019117 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-405 |
| Cow position: | chr5:46663663-46664084 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-405 |
| Cow position: | chr5:58195666-58196083 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-405 |
| Cow position: | chr5:59481919-59482334 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 314 |
| Conread position: | 2-416 |
| Cow position: | chr5:45699948-45700358 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 167 |
| Conread position: | 2-444 |
| Cow position: | chr5:46738920-46738466 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 423 |
| Conread position: | 3-370 |
| Cow position: | chr5:6158531-6158152 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 3-391 |
| Cow position: | chr5:26090160-26089765 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 3-416 |
| Cow position: | chr5:4068656-4069080 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 7-161 |
| Cow position: | chr5:4384896-4385055 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 10-375 |
| Cow position: | chr5:47073580-47073952 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 10-416 |
| Cow position: | chr5:9686741-9686335 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 15-332 |
| Cow position: | chr5:58819957-58819626 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 31-312 |
| Cow position: | chr5:5318063-5317769 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 31-416 |
| Cow position: | chr5:55627685-55628078 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 35-450 |
| Cow position: | chr5:51162612-51163026 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 39-420 |
| Cow position: | chr5:27038934-27039312 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 52-406 |
| Cow position: | chr5:10776547-10776182 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 52-466 |
| Cow position: | chr5:14659376-14658958 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 54-401 |
| Cow position: | chr5:28022880-28023230 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 62-417 |
| Cow position: | chr5:51861354-51861007 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 65-312 |
| Cow position: | chr5:18653773-18654033 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 66-451 |
| Cow position: | chr5:46630707-46630314 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 382 |
| Conread position: | 78-340 |
| Cow position: | chr5:32249796-32250061 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 78-397 |
| Cow position: | chr5:29436223-29435894 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 83-378 |
| Cow position: | chr5:23755873-23755565 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 85-416 |
| Cow position: | chr5:20972282-20971954 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 179 |
| Conread position: | 90-303 |
| Cow position: | chr5:55096953-55096733 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 92-281 |
| Cow position: | chr5:52805126-52805323 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 72, 96 |
| Conread position: | 103-361 |
| Cow position: | chr5:5786829-5786570 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 90, 54 |
| Conread position: | 111-432 |
| Cow position: | chr5:31202839-31202520 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 112-281 |
| Cow position: | chr5:27060465-27060291 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 114-412 |
| Cow position: | chr5:57977037-57977344 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 194 |
| Conread position: | 119-398 |
| Cow position: | chr5:24108803-24108521 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 124-278 |
| Cow position: | chr5:39247591-39247429 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 124-434 |
| Cow position: | chr5:27001403-27001718 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 144-468 |
| Cow position: | chr5:27489059-27489393 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 187-401 |
| Cow position: | chr5:23960452-23960238 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-435 |
| Cow position: | chr5:49129085-49129330 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 191-370 |
| Cow position: | chr5:17774173-17773994 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 193-438 |
| Cow position: | chr5:51771429-51771178 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 194-403 |
| Cow position: | chr5:12644068-12643864 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 194-405 |
| Cow position: | chr5:73489691-73489480 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-416 |
| Cow position: | chr5:4385130-4385338 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 207-396 |
| Cow position: | chr5:76123696-76123509 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 223-405 |
| Cow position: | chr5:10843520-10843338 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-405 |
| Cow position: | chr5:9042949-9043119 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 239-444 |
| Cow position: | chr5:18271523-18271727 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 240-468 |
| Cow position: | chr5:27682828-27682593 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 258-416 |
| Cow position: | chr5:25206758-25206592 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 270-468 |
| Cow position: | chr5:27059178-27058976 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 270-468 |
| Cow position: | chr5:27060081-27059879 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 282-417 |
| Cow position: | chr5:18665952-18666089 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 285-416 |
| Cow position: | chr5:6611972-6612103 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 28 |
Show alignments to all cow chromosomes.