Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-217
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-240
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-246
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-291
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 225

Conread position: 1-302
Cow position:
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 277

Conread position: 1-305
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 297

Conread position: 1-308
Cow position:
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-367
Cow position:
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 291

Conread position: 1-373
Cow position:
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 255

Conread position: 1-374
Cow position:
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-383
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 80

Conread position: 1-387
Cow position:
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 1-391
Cow position:
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 89

Conread position: 1-396
Cow position:
Alignm length: 408
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-398
Cow position:
Alignm length: 413
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 20

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 1-402
Cow position:
Alignm length: 422
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 48

Conread position: 1-403
Cow position:
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 276

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 377

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 191

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 30

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 239

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 252

Conread position: 1-412
Cow position:
Alignm length: 429
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 128

Conread position: 1-413
Cow position:
Alignm length: 422
Alignm identity: 268
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 83

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 266

Conread position: 1-415
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 354

Conread position: 1-416
Cow position:
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 417
Alignm identity: 281
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 253, 54

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 32

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 1-416
Cow position:
Alignm length: 450
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 116

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-416
Cow position:
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 134

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 110

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-433
Cow position:
Alignm length: 449
Alignm identity: 282
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 92

Conread position: 1-437
Cow position:
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 1-437
Cow position:
Alignm length: 451
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 1-444
Cow position:
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 127

Conread position: 1-450
Cow position:
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 401

Conread position: 1-468
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 53

Conread position: 1-468
Cow position:
Alignm length: 478
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 137

Conread position: 1-468
Cow position:
Alignm length: 480
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 1-468
Cow position:
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 76

Conread position: 2-272
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 2-401
Cow position:
Alignm length: 417
Alignm identity: 275
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 23

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-405
Cow position:
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-405
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 314

Conread position: 2-416
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 167

Conread position: 2-444
Cow position:
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 423

Conread position: 3-370
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 194

Conread position: 3-391
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 3-416
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 7-161
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 10-375
Cow position:
Alignm length: 380
Alignm identity: 241
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 73

Conread position: 10-416
Cow position:
Alignm length: 421
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 44

Conread position: 15-332
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 31-312
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 31-416
Cow position:
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 35-450
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 16, 92

Conread position: 39-420
Cow position:
Alignm length: 389
Alignm identity: 247
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 52

Conread position: 52-406
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 52-466
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 62

Conread position: 54-401
Cow position:
Alignm length: 357
Alignm identity: 225
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 96

Conread position: 62-417
Cow position:
Alignm length: 365
Alignm identity: 234
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 51

Conread position: 65-312
Cow position:
Alignm length: 261
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 66-451
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 382

Conread position: 78-340
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 81

Conread position: 78-397
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 7

Conread position: 83-378
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 63

Conread position: 85-416
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 179

Conread position: 90-303
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 45

Conread position: 92-281
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 96

Conread position: 103-361
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 54

Conread position: 111-432
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 46

Conread position: 112-281
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 22

Conread position: 114-412
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 194

Conread position: 119-398
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 165

Conread position: 124-278
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 108

Conread position: 124-434
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 130

Conread position: 144-468
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 187-401
Cow position:
Alignm length: 215
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 188-435
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 191-370
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 64, 72

Conread position: 193-438
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 142

Conread position: 194-403
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 199-416
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 20

Conread position: 207-396
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 75, 0

Conread position: 223-405
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 235-405
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 239-444
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 75

Conread position: 240-468
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 73

Conread position: 258-416
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 270-468
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 270-468
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 282-417
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 285-416
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 28

Show alignments to all cow chromosomes.