Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-145
Cow position:
Alignm length: 148
Alignm identity: 125
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-152
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 58

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 1-228
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-230
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 123

Conread position: 1-278
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 33

Conread position: 1-306
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 127

Conread position: 1-312
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 37

Conread position: 1-313
Cow position:
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-343
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-356
Cow position:
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 221

Conread position: 1-374
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 27

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 128

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 276

Conread position: 1-386
Cow position:
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 1-386
Cow position:
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 277

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 78

Conread position: 1-401
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 284

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 122

Conread position: 1-402
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 50

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 327

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 223

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 197

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 271

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 257

Conread position: 1-405
Cow position:
Alignm length: 421
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 328

Conread position: 1-405
Cow position:
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 357

Conread position: 1-406
Cow position:
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 209

Conread position: 1-408
Cow position:
Alignm length: 421
Alignm identity: 273
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 11

Conread position: 1-413
Cow position:
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 1-414
Cow position:
Alignm length: 429
Alignm identity: 278
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 160

Conread position: 1-415
Cow position:
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 152

Conread position: 1-415
Cow position:
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 35

Conread position: 1-415
Cow position:
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 296
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 292

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 292

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 90

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 406

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 54

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 102

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 325

Conread position: 1-416
Cow position:
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 435
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-416
Cow position:
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 1-416
Cow position:
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 36

Conread position: 1-444
Cow position:
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 1-445
Cow position:
Alignm length: 455
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 101

Conread position: 1-464
Cow position:
Alignm length: 481
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 128

Conread position: 1-468
Cow position:
Alignm length: 481
Alignm identity: 334
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 163, 53

Conread position: 1-468
Cow position:
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 1-468
Cow position:
Alignm length: 486
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 1-468
Cow position:
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 192

Conread position: 1-468
Cow position:
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 221

Conread position: 1-468
Cow position:
Alignm length: 489
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 90

Conread position: 2-242
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 6, 142

Conread position: 2-348
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 116

Conread position: 2-391
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 13

Conread position: 2-396
Cow position:
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 2-405
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 2-405
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 116

Conread position: 2-416
Cow position:
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 259

Conread position: 2-416
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 115

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 2-439
Cow position:
Alignm length: 455
Alignm identity: 300
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 36

Conread position: 2-468
Cow position:
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 3-402
Cow position:
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 3-405
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-405
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 233

Conread position: 3-416
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 3-468
Cow position:
Alignm length: 472
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 59

Conread position: 4-416
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 384

Conread position: 6-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 6-444
Cow position:
Alignm length: 453
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 418

Conread position: 7-352
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 120

Conread position: 9-416
Cow position:
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 121

Conread position: 11-468
Cow position:
Alignm length: 476
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 35-411
Cow position:
Alignm length: 397
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 80

Conread position: 43-421
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 62

Conread position: 54-401
Cow position:
Alignm length: 356
Alignm identity: 227
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 83

Conread position: 54-405
Cow position:
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 57-411
Cow position:
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 164

Conread position: 81-405
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 82-416
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 275

Conread position: 90-405
Cow position:
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 204

Conread position: 96-468
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 270

Conread position: 98-410
Cow position:
Alignm length: 328
Alignm identity: 216
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 14

Conread position: 118-414
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 204

Conread position: 125-400
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 14

Conread position: 133-401
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 140-468
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 232

Conread position: 148-401
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 193-415
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 50

Conread position: 193-468
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 16

Conread position: 201-401
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 226-468
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 196, 103

Conread position: 246-405
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 17

Conread position: 250-450
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 172, 64

Conread position: 253-466
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 169, 5

Conread position: 258-405
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 265-405
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.