Cow genome map
| Conread name: | Ss1.1-rcbl0_011794.5 |
| Conread position: | 1-421 |
| Cow position: | chr11:59369655-59370072 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 10 |
| Conread position: | 11-287 |
| Cow position: | chr11:30124576-30124301 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 40 |
| Conread position: | 11-405 |
| Cow position: | chr11:8283303-8283694 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 332 |
| Conread position: | 11-436 |
| Cow position: | chr11:28063685-28064097 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 59 |
| Conread position: | 14-293 |
| Cow position: | chr11:39802290-39802566 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 70 |
| Conread position: | 14-298 |
| Cow position: | chr11:9220108-9219839 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 14-436 |
| Cow position: | chr11:52886197-52885797 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 15-450 |
| Cow position: | chr11:10090521-10090959 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 19-204 |
| Cow position: | chr11:7114065-7114238 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 22-335 |
| Cow position: | chr11:67866818-67866505 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 188, 11 |
| Conread position: | 22-449 |
| Cow position: | chr11:50028002-50027582 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 23-314 |
| Cow position: | chr11:87128642-87128927 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 23-436 |
| Cow position: | chr11:21443178-21443573 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 22 |
| Conread position: | 23-444 |
| Cow position: | chr11:30205788-30206191 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 58, 88 |
| Conread position: | 23-450 |
| Cow position: | chr11:28049345-28048927 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 25-428 |
| Cow position: | chr11:21474116-21474520 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 26-428 |
| Cow position: | chr11:28701853-28702269 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 28-205 |
| Cow position: | chr11:42429873-42430051 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 28-444 |
| Cow position: | chr11:13066810-13066387 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 189, 59 |
| Conread position: | 28-447 |
| Cow position: | chr11:75873493-75873073 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 29-449 |
| Cow position: | chr11:11677214-11677626 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 32-439 |
| Cow position: | chr11:18073162-18072751 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 34-396 |
| Cow position: | chr11:30187736-30188085 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 40-416 |
| Cow position: | chr11:15899077-15898700 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 40-450 |
| Cow position: | chr11:29233392-29232972 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 5 |
| Conread position: | 47-406 |
| Cow position: | chr11:31726373-31726019 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 61-294 |
| Cow position: | chr11:8261655-8261423 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 6, 91 |
| Conread position: | 62-294 |
| Cow position: | chr11:44495554-44495325 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 63-450 |
| Cow position: | chr11:66727269-66727654 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 53 |
| Conread position: | 64-450 |
| Cow position: | chr11:61769445-61769060 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 135, 41 |
| Conread position: | 66-450 |
| Cow position: | chr11:12417955-12417576 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 68-446 |
| Cow position: | chr11:9606689-9606304 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 89-436 |
| Cow position: | chr11:62229129-62229456 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 35 |
| Conread position: | 100-287 |
| Cow position: | chr11:30125313-30125127 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 101-402 |
| Cow position: | chr11:33978283-33977974 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 137, 43 |
| Conread position: | 114-450 |
| Cow position: | chr11:23730727-23731072 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 184 |
| Conread position: | 134-450 |
| Cow position: | chr11:22934766-22935073 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 94 |
| Conread position: | 135-283 |
| Cow position: | chr11:9659419-9659274 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 135-283 |
| Cow position: | chr11:30305213-30305362 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 135-436 |
| Cow position: | chr11:26124963-26124659 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 135-445 |
| Cow position: | chr11:12358457-12358145 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 44 |
| Conread position: | 135-450 |
| Cow position: | chr11:58134355-58134670 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 24 |
| Conread position: | 136-429 |
| Cow position: | chr11:84389594-84389888 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 65 |
| Conread position: | 136-445 |
| Cow position: | chr11:43514665-43514358 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 6 |
| Conread position: | 136-450 |
| Cow position: | chr11:56649300-56649615 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 137-450 |
| Cow position: | chr11:53613636-53613332 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 290, 31 |
| Conread position: | 139-445 |
| Cow position: | chr11:15172422-15172729 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 145 |
| Conread position: | 145-441 |
| Cow position: | chr11:23577615-23577920 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 50 |
| Conread position: | 146-270 |
| Cow position: | chr11:256211-256085 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 146-283 |
| Cow position: | chr11:12351089-12350951 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 146-436 |
| Cow position: | chr11:76374228-76373948 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 146-445 |
| Cow position: | chr11:4027587-4027288 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 137 |
| Conread position: | 146-445 |
| Cow position: | chr11:44251775-44252071 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 146-450 |
| Cow position: | chr11:9157178-9156876 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 147-287 |
| Cow position: | chr11:75920377-75920519 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 147-412 |
| Cow position: | chr11:20510102-20510366 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 96 |
| Conread position: | 147-436 |
| Cow position: | chr11:47760725-47760427 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 147-441 |
| Cow position: | chr11:24393297-24393597 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 147-445 |
| Cow position: | chr11:23877282-23877582 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 32 |
| Conread position: | 149-292 |
| Cow position: | chr11:10051296-10051440 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 149-451 |
| Cow position: | chr11:31926153-31926450 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 29 |
| Conread position: | 150-443 |
| Cow position: | chr11:41170710-41170416 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 29 |
| Conread position: | 150-444 |
| Cow position: | chr11:9734689-9734390 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 150-445 |
| Cow position: | chr11:10847424-10847722 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 29 |
| Conread position: | 150-445 |
| Cow position: | chr11:11988089-11988386 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr11:28054617-28054337 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 29 |
| Conread position: | 150-445 |
| Cow position: | chr11:29668649-29668337 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 29 |
| Conread position: | 150-445 |
| Cow position: | chr11:38835449-38835152 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr11:44157271-44156974 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr11:53432084-53431787 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 29 |
| Conread position: | 150-446 |
| Cow position: | chr11:12093540-12093834 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 63 |
| Conread position: | 151-441 |
| Cow position: | chr11:19102503-19102211 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 28 |
| Conread position: | 151-445 |
| Cow position: | chr11:4270878-4270583 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 28 |
| Conread position: | 152-311 |
| Cow position: | chr11:54209595-54209753 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 107 |
| Conread position: | 152-445 |
| Cow position: | chr11:85393828-85393533 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 140 |
| Conread position: | 160-444 |
| Cow position: | chr11:17107702-17107416 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 180 |
| Conread position: | 161-445 |
| Cow position: | chr11:8245300-8245587 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 163-283 |
| Cow position: | chr11:8267545-8267425 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 163-444 |
| Cow position: | chr11:1496087-1495815 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 21 |
| Conread position: | 163-449 |
| Cow position: | chr11:64045985-64046274 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 163-450 |
| Cow position: | chr11:46246568-46246273 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 37 |
| Conread position: | 164-267 |
| Cow position: | chr11:8519987-8520090 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-290 |
| Cow position: | chr11:20920758-20920631 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-444 |
| Cow position: | chr11:5343230-5342946 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-444 |
| Cow position: | chr11:28229770-28229487 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 166 |
| Conread position: | 164-444 |
| Cow position: | chr11:33194566-33194284 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 148 |
| Conread position: | 164-449 |
| Cow position: | chr11:15983611-15983901 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr11:36744193-36743905 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 164-449 |
| Cow position: | chr11:61401064-61400784 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 231 |
| Conread position: | 164-449 |
| Cow position: | chr11:67450485-67450774 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr11:73477295-73477584 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-451 |
| Cow position: | chr11:31874781-31874492 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 153 |
| Conread position: | 170-381 |
| Cow position: | chr11:38505611-38505399 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 187, 92 |
| Conread position: | 170-444 |
| Cow position: | chr11:67846577-67846300 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 170-449 |
| Cow position: | chr11:3493005-3493273 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 167 |
| Conread position: | 170-449 |
| Cow position: | chr11:19064255-19063974 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 221 |
| Conread position: | 170-449 |
| Cow position: | chr11:28108144-28108426 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 170-449 |
| Cow position: | chr11:52419382-52419672 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 275 |
| Conread position: | 170-449 |
| Cow position: | chr11:57628052-57627762 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 73 |
| Conread position: | 175-450 |
| Cow position: | chr11:4041089-4040816 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 82 |
| Conread position: | 186-446 |
| Cow position: | chr11:7116230-7116493 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 191-449 |
| Cow position: | chr11:64082066-64081807 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 194-444 |
| Cow position: | chr11:20734224-20733971 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 199-450 |
| Cow position: | chr11:40775971-40775719 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 121 |
| Conread position: | 202-447 |
| Cow position: | chr11:10868524-10868765 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 203-451 |
| Cow position: | chr11:45111650-45111902 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 207-427 |
| Cow position: | chr11:69716394-69716172 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 216-435 |
| Cow position: | chr11:43011409-43011627 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 216-449 |
| Cow position: | chr11:63655297-63655061 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 230-446 |
| Cow position: | chr11:42432206-42432423 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 231-451 |
| Cow position: | chr11:67153704-67153925 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 126, 55 |
| Conread position: | 237-445 |
| Cow position: | chr11:71329656-71329867 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 245-412 |
| Cow position: | chr11:26625877-26625713 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 248-444 |
| Cow position: | chr11:10217249-10217056 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 254-450 |
| Cow position: | chr11:10051803-10051999 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 259-449 |
| Cow position: | chr11:53287082-53286889 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 280-450 |
| Cow position: | chr11:4057121-4057294 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 294-450 |
| Cow position: | chr11:44492152-44491995 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 333-444 |
| Cow position: | chr11:17546324-17546438 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.