Cow genome map
Conread name: | Ss1.1-rcbl0_011794.5 |
Conread position: | 15-275 |
Cow position: | chr12:1138252-1138499 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 187 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 22-315 |
Cow position: | chr12:369769-370055 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 203 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 55, 48 |
Conread position: | 22-446 |
Cow position: | chr12:1869428-1869854 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 124 |
Conread position: | 23-396 |
Cow position: | chr12:21500608-21500968 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 246 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 54, 32 |
Conread position: | 24-371 |
Cow position: | chr12:348551-348908 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 242 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 201, 108 |
Conread position: | 40-154 |
Cow position: | chr12:15950477-15950363 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 107, 5 |
Conread position: | 55-285 |
Cow position: | chr12:21941926-21942165 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 168 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 59-446 |
Cow position: | chr12:3631685-3631303 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 101 |
Conread position: | 111-449 |
Cow position: | chr12:10485286-10485621 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 236 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 154, 22 |
Conread position: | 122-449 |
Cow position: | chr12:8197449-8197779 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 0 |
Conread position: | 128-443 |
Cow position: | chr12:2282799-2283122 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 270 |
Conread position: | 135-283 |
Cow position: | chr12:44005142-44004997 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 30, 113 |
Conread position: | 136-279 |
Cow position: | chr12:251806-251665 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 136-445 |
Cow position: | chr12:28765767-28765457 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 6 |
Conread position: | 146-436 |
Cow position: | chr12:14662370-14662075 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 146-445 |
Cow position: | chr12:42859564-42859263 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 24 |
Conread position: | 146-449 |
Cow position: | chr12:21198223-21198526 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 89 |
Conread position: | 147-445 |
Cow position: | chr12:25100797-25100496 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 34 |
Conread position: | 150-438 |
Cow position: | chr12:27932676-27932382 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 213 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 112, 29 |
Conread position: | 150-445 |
Cow position: | chr12:1402759-1403053 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-445 |
Cow position: | chr12:22205479-22205182 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 151-444 |
Cow position: | chr12:27855690-27855402 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 29 |
Conread position: | 151-445 |
Cow position: | chr12:11098512-11098807 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 28 |
Conread position: | 152-283 |
Cow position: | chr12:21902209-21902341 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 160-454 |
Cow position: | chr12:37357803-37358088 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 44, 92 |
Conread position: | 163-299 |
Cow position: | chr12:21208680-21208815 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 163-439 |
Cow position: | chr12:16821749-16822028 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 163-445 |
Cow position: | chr12:21426968-21427251 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 53 |
Conread position: | 163-446 |
Cow position: | chr12:32653818-32654103 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 123 |
Conread position: | 164-427 |
Cow position: | chr12:33986436-33986702 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-442 |
Cow position: | chr12:21254382-21254108 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 134 |
Conread position: | 164-444 |
Cow position: | chr12:6406369-6406086 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 164-444 |
Cow position: | chr12:37558830-37559108 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 53 |
Conread position: | 164-449 |
Cow position: | chr12:4157651-4157940 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr12:43031111-43030824 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 83 |
Conread position: | 208-428 |
Cow position: | chr12:8677763-8677551 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 172 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 209-436 |
Cow position: | chr12:21371002-21371224 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 156 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 148, 108 |
Conread position: | 228-407 |
Cow position: | chr12:6493073-6492895 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 137 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 52, 110 |
Conread position: | 238-443 |
Cow position: | chr12:601004-600796 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 166 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 250-355 |
Cow position: | chr12:36482802-36482907 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 93 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 250-446 |
Cow position: | chr12:36427600-36427799 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 250-446 |
Cow position: | chr12:36448942-36449142 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 250-446 |
Cow position: | chr12:36479538-36479737 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 250-450 |
Cow position: | chr12:36367197-36367400 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 311-449 |
Cow position: | chr12:21942161-21942302 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 116 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 319-446 |
Cow position: | chr12:35314221-35314091 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 329-443 |
Cow position: | chr12:25263027-25262910 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.