Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 2-304
Cow position: chr15:24716657-24716942 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 142

Conread position: 11-204
Cow position: chr15:35648121-35647928 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-352
Cow position: chr15:36642729-36643059 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 55

Conread position: 11-444
Cow position: chr15:24794154-24794568 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 110

Conread position: 14-207
Cow position: chr15:23264864-23265051 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 135, 60

Conread position: 14-380
Cow position: chr15:12615275-12615619 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 343, 54

Conread position: 14-445
Cow position: chr15:9429743-9430157 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 19

Conread position: 14-446
Cow position: chr15:21449498-21449906 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 40

Conread position: 14-449
Cow position: chr15:2802384-2801945 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 327

Conread position: 15-333
Cow position: chr15:7929262-7929558 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 162, 51

Conread position: 15-435
Cow position: chr15:14372595-14372167 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 280
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 59

Conread position: 15-449
Cow position: chr15:2413764-2413342 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 30

Conread position: 16-210
Cow position: chr15:369562-369369 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 115

Conread position: 19-375
Cow position: chr15:20357097-20356748 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 7

Conread position: 22-419
Cow position: chr15:9739843-9739456 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 268
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 185, 106

Conread position: 22-446
Cow position: chr15:19817775-19818183 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 22-449
Cow position: chr15:16507789-16508212 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 151

Conread position: 22-449
Cow position: chr15:31784993-31784569 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 280
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 16

Conread position: 23-284
Cow position: chr15:11298599-11298340 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 99

Conread position: 23-366
Cow position: chr15:1664294-1664616 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 24-449
Cow position: chr15:17472708-17473124 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 264
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 79

Conread position: 24-449
Cow position: chr15:40105674-40106084 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 14

Conread position: 26-240
Cow position: chr15:8408769-8408985 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 96

Conread position: 26-414
Cow position: chr15:5103675-5103288 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 258
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 44

Conread position: 28-219
Cow position: chr15:14633881-14634065 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 28-444
Cow position: chr15:7984216-7983807 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 145

Conread position: 28-447
Cow position: chr15:498566-498978 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 42

Conread position: 31-442
Cow position: chr15:30810817-30811209 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 325, 37

Conread position: 31-443
Cow position: chr15:7787889-7787488 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 49

Conread position: 32-442
Cow position: chr15:6622889-6623308 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 110

Conread position: 34-435
Cow position: chr15:3842619-3842213 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 57

Conread position: 39-450
Cow position: chr15:7234111-7234526 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 40-446
Cow position: chr15:686740-687151 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 46-446
Cow position: chr15:1237513-1237899 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 52-446
Cow position: chr15:51714786-51715181 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 93

Conread position: 56-419
Cow position: chr15:17218566-17218210 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 80

Conread position: 57-450
Cow position: chr15:35735407-35735797 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 167

Conread position: 59-438
Cow position: chr15:48322640-48323023 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 18

Conread position: 67-447
Cow position: chr15:7549252-7549622 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 61

Conread position: 68-444
Cow position: chr15:1834629-1834252 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 70-442
Cow position: chr15:7966124-7965742 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 117

Conread position: 75-450
Cow position: chr15:47261309-47261681 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 14

Conread position: 97-442
Cow position: chr15:32481018-32480665 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 91

Conread position: 106-450
Cow position: chr15:33644927-33644577 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 7

Conread position: 111-454
Cow position: chr15:32673659-32673322 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 31

Conread position: 115-450
Cow position: chr15:32693450-32693792 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 59

Conread position: 116-450
Cow position: chr15:28465738-28466086 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 54

Conread position: 121-450
Cow position: chr15:4961540-4961866 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 144

Conread position: 138-445
Cow position: chr15:44828705-44829016 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 139-376
Cow position: chr15:53338936-53339168 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 88

Conread position: 140-449
Cow position: chr15:1772403-1772718 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 145-446
Cow position: chr15:37392410-37392712 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 146-270
Cow position: chr15:38979847-38979975 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 146-271
Cow position: chr15:10787209-10787082 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 146-284
Cow position: chr15:6650080-6649941 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 57

Conread position: 146-299
Cow position: chr15:2924806-2924952 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 146-439
Cow position: chr15:524942-524645 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 146-443
Cow position: chr15:8750345-8750640 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 121

Conread position: 146-443
Cow position: chr15:10888524-10888831 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 134

Conread position: 146-443
Cow position: chr15:51216508-51216805 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 146-445
Cow position: chr15:315940-315639 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 146-445
Cow position: chr15:4765124-4765427 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 146-445
Cow position: chr15:6156034-6155727 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 146-445
Cow position: chr15:7544801-7545099 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 146-445
Cow position: chr15:8099407-8099697 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 140

Conread position: 146-445
Cow position: chr15:32494467-32494165 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 146-449
Cow position: chr15:7934249-7934550 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 146-450
Cow position: chr15:690709-690995 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 81

Conread position: 146-450
Cow position: chr15:4922070-4922377 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 147-254
Cow position: chr15:6553936-6553828 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 147-271
Cow position: chr15:17271476-17271352 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 114

Conread position: 147-443
Cow position: chr15:4385188-4385483 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 147-445
Cow position: chr15:12421245-12420944 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 111

Conread position: 147-446
Cow position: chr15:1764010-1764314 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 111

Conread position: 147-450
Cow position: chr15:4671349-4671659 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 147-450
Cow position: chr15:7260547-7260847 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 247

Conread position: 148-277
Cow position: chr15:36648833-36648961 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 148-443
Cow position: chr15:18332906-18332610 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 132

Conread position: 148-445
Cow position: chr15:44069847-44070144 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 25

Conread position: 149-436
Cow position: chr15:9912559-9912844 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 133

Conread position: 149-445
Cow position: chr15:24295020-24295316 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 23

Conread position: 150-436
Cow position: chr15:21665821-21665533 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-436
Cow position: chr15:31358811-31359099 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position: chr15:7837169-7837465 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 22

Conread position: 150-445
Cow position: chr15:15347194-15346898 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position: chr15:42936639-42936930 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 151-398
Cow position: chr15:41366095-41366341 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 90

Conread position: 151-443
Cow position: chr15:17292363-17292662 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 151-445
Cow position: chr15:2076574-2076869 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 151-445
Cow position: chr15:18576640-18576935 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 28

Conread position: 152-276
Cow position: chr15:23156916-23156790 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 152-308
Cow position: chr15:4682157-4682312 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 131
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 64, 0

Conread position: 152-436
Cow position: chr15:13073722-13074002 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 118

Conread position: 152-445
Cow position: chr15:19738126-19737831 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 27

Conread position: 152-446
Cow position: chr15:328353-328652 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 292

Conread position: 153-429
Cow position: chr15:6593017-6592752 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 147

Conread position: 153-444
Cow position: chr15:6471997-6471704 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 106

Conread position: 154-267
Cow position: chr15:4733787-4733901 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 157-283
Cow position: chr15:5544721-5544848 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 161-448
Cow position: chr15:35753662-35753372 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 206

Conread position: 163-377
Cow position: chr15:2012013-2012227 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 192, 21

Conread position: 163-446
Cow position: chr15:3888810-3889099 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 28

Conread position: 164-293
Cow position: chr15:1782185-1782314 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 105

Conread position: 164-399
Cow position: chr15:29009770-29010008 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-405
Cow position: chr15:36077178-36077422 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position: chr15:17080271-17079988 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position: chr15:18268056-18267772 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position: chr15:1519219-1518930 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position: chr15:1882575-1882286 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position: chr15:2647725-2647435 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position: chr15:4142887-4142598 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position: chr15:4196394-4196682 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 17

Conread position: 164-449
Cow position: chr15:28490210-28489928 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 96

Conread position: 164-449
Cow position: chr15:50124011-50123722 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position: chr15:50147009-50147287 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 164

Conread position: 168-427
Cow position: chr15:42320485-42320225 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 163

Conread position: 170-439
Cow position: chr15:36970862-36971131 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 131

Conread position: 170-446
Cow position: chr15:56424-56706 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 254

Conread position: 170-449
Cow position: chr15:3009913-3009632 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 116

Conread position: 173-449
Cow position: chr15:444548-444825 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 194

Conread position: 176-445
Cow position: chr15:36626345-36626063 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 179-446
Cow position: chr15:7894280-7894014 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 111

Conread position: 184-416
Cow position: chr15:369202-368973 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 173, 17

Conread position: 194-450
Cow position: chr15:35647699-35647440 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 194-451
Cow position: chr15:6078725-6078975 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 59

Conread position: 198-450
Cow position: chr15:5980328-5980585 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 206-436
Cow position: chr15:14582371-14582143 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 147, 37

Conread position: 208-445
Cow position: chr15:3261352-3261113 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 209-436
Cow position: chr15:4812585-4812812 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 150

Conread position: 210-447
Cow position: chr15:14634402-14634649 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 24

Conread position: 216-450
Cow position: chr15:32720753-32720514 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 231-445
Cow position: chr15:4651368-4651584 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 232-446
Cow position: chr15:2591762-2591546 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 125, 144

Conread position: 232-446
Cow position: chr15:32711101-32711317 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 21

Conread position: 248-445
Cow position: chr15:6553798-6553598 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 253-449
Cow position: chr15:789551-789352 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 104, 0

Conread position: 259-445
Cow position: chr15:38980697-38980886 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 96, 0

Conread position: 270-445
Cow position: chr15:53137178-53137004 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 89, 46

Conread position: 270-449
Cow position: chr15:8057338-8057518 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 17

Conread position: 286-444
Cow position: chr15:32672972-32673133 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 18

Conread position: 301-447
Cow position: chr15:6326243-6326099 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 115

Conread position: 302-442
Cow position: chr15:32203734-32203872 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 128, 9

Conread position: 302-450
Cow position: chr15:4685673-4685822 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 15

Conread position: 309-449
Cow position: chr15:24717173-24717315 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 44

Conread position: 313-442
Cow position: chr15:4678387-4678519 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 333-449
Cow position: chr15:1782324-1782443 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 357-450
Cow position: chr15:31862426-31862332 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.