Cow genome map
Conread name: | Ss1.1-rcbl0_011794.5 |
Conread position: | 1-428 |
Cow position: | chr16:29033477-29033898 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 87 |
Conread position: | 11-188 |
Cow position: | chr16:18499266-18499094 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 11-241 |
Cow position: | chr16:49256681-49256456 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 173 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 25, 143 |
Conread position: | 11-441 |
Cow position: | chr16:16272158-16271733 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 59 |
Conread position: | 11-446 |
Cow position: | chr16:49235374-49234955 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 33 |
Conread position: | 14-202 |
Cow position: | chr16:336162-336359 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 150 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 49, 24 |
Conread position: | 14-399 |
Cow position: | chr16:5889970-5890339 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 111 |
Conread position: | 15-445 |
Cow position: | chr16:23807876-23808295 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 59 |
Conread position: | 15-446 |
Cow position: | chr16:42739648-42739231 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 51 |
Conread position: | 15-457 |
Cow position: | chr16:25156433-25155992 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 51 |
Conread position: | 17-443 |
Cow position: | chr16:48915699-48915283 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 289 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 91, 23 |
Conread position: | 19-444 |
Cow position: | chr16:28437949-28437512 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 290 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 108, 9 |
Conread position: | 19-450 |
Cow position: | chr16:25257386-25257815 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 106 |
Conread position: | 21-407 |
Cow position: | chr16:54177922-54177556 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 263 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 120, 44 |
Conread position: | 22-445 |
Cow position: | chr16:47563843-47564276 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 302 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 75, 201 |
Conread position: | 22-449 |
Cow position: | chr16:47473044-47473450 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 347, 48 |
Conread position: | 23-412 |
Cow position: | chr16:18764153-18763785 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 21 |
Conread position: | 26-276 |
Cow position: | chr16:37457129-37456876 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 28-293 |
Cow position: | chr16:41756854-41756599 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 182 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 35, 61 |
Conread position: | 28-439 |
Cow position: | chr16:25170792-25171220 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 292 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 34, 98 |
Conread position: | 28-451 |
Cow position: | chr16:26516962-26516536 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 55 |
Conread position: | 78-443 |
Cow position: | chr16:44410387-44410759 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 244 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 7, 42 |
Conread position: | 98-444 |
Cow position: | chr16:42186134-42185787 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 224 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 11, 143 |
Conread position: | 114-450 |
Cow position: | chr16:28867611-28867273 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 227 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 13, 75 |
Conread position: | 119-357 |
Cow position: | chr16:18687586-18687345 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 119-429 |
Cow position: | chr16:25085187-25085485 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 32 |
Conread position: | 135-445 |
Cow position: | chr16:3070117-3069804 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 205 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 71, 13 |
Conread position: | 135-445 |
Cow position: | chr16:31592343-31592039 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 9 |
Conread position: | 135-449 |
Cow position: | chr16:2239179-2238868 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 161 |
Conread position: | 136-445 |
Cow position: | chr16:5483884-5484194 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 6 |
Conread position: | 136-445 |
Cow position: | chr16:8816543-8816231 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 6 |
Conread position: | 136-445 |
Cow position: | chr16:10203869-10203565 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 6 |
Conread position: | 136-445 |
Cow position: | chr16:15566303-15566616 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 6 |
Conread position: | 139-445 |
Cow position: | chr16:1567889-1567579 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 141-436 |
Cow position: | chr16:15184372-15184661 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 38 |
Conread position: | 146-283 |
Cow position: | chr16:14430165-14430304 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 146-283 |
Cow position: | chr16:20254739-20254600 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 146-443 |
Cow position: | chr16:2727716-2727415 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 146-445 |
Cow position: | chr16:407459-407157 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 34 |
Conread position: | 146-445 |
Cow position: | chr16:2483570-2483266 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 95 |
Conread position: | 146-450 |
Cow position: | chr16:28471530-28471223 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 106 |
Conread position: | 147-445 |
Cow position: | chr16:2411393-2411093 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 32 |
Conread position: | 148-271 |
Cow position: | chr16:19713311-19713189 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 148-446 |
Cow position: | chr16:34529896-34530197 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 0 |
Conread position: | 150-436 |
Cow position: | chr16:27734214-27733921 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 228 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 138, 29 |
Conread position: | 150-443 |
Cow position: | chr16:43897693-43897399 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-445 |
Cow position: | chr16:10437819-10438110 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-445 |
Cow position: | chr16:12538347-12538051 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 19 |
Conread position: | 150-445 |
Cow position: | chr16:23252929-23252632 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 17 |
Conread position: | 150-445 |
Cow position: | chr16:23982888-23983183 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 30 |
Conread position: | 150-445 |
Cow position: | chr16:25341544-25341832 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 29 |
Conread position: | 150-445 |
Cow position: | chr16:25441202-25441501 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 29 |
Conread position: | 150-445 |
Cow position: | chr16:25457887-25457590 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-445 |
Cow position: | chr16:29046600-29046896 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-445 |
Cow position: | chr16:40296600-40296303 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 151-432 |
Cow position: | chr16:836607-836908 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 151-443 |
Cow position: | chr16:26663328-26663624 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 29 |
Conread position: | 152-292 |
Cow position: | chr16:50506767-50506908 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 117 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 152-299 |
Cow position: | chr16:1431736-1431883 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 153-445 |
Cow position: | chr16:9930515-9930808 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 20 |
Conread position: | 154-423 |
Cow position: | chr16:36159313-36159585 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 191 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 15, 58 |
Conread position: | 161-444 |
Cow position: | chr16:25188222-25188501 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 23 |
Conread position: | 164-304 |
Cow position: | chr16:29675785-29675648 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 164-449 |
Cow position: | chr16:32321-32611 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr16:5661433-5661721 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 123 |
Conread position: | 164-449 |
Cow position: | chr16:28170781-28170494 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 84 |
Conread position: | 164-449 |
Cow position: | chr16:31832215-31832504 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 165 |
Conread position: | 164-449 |
Cow position: | chr16:53045937-53046226 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 170-444 |
Cow position: | chr16:10375988-10375726 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 175 |
Conread position: | 170-444 |
Cow position: | chr16:41163469-41163192 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 0 |
Conread position: | 170-449 |
Cow position: | chr16:4302741-4302462 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 92 |
Conread position: | 190-446 |
Cow position: | chr16:18498701-18498445 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 194-449 |
Cow position: | chr16:24105325-24105581 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 66 |
Conread position: | 202-446 |
Cow position: | chr16:25892347-25892591 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 63 |
Conread position: | 208-443 |
Cow position: | chr16:14666178-14665940 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 220-445 |
Cow position: | chr16:15492875-15493104 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 223-418 |
Cow position: | chr16:36232090-36231897 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 147 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 236-449 |
Cow position: | chr16:26650898-26651115 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 148 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 239-449 |
Cow position: | chr16:6943267-6943481 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 248-444 |
Cow position: | chr16:28198004-28197805 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 157 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 109, 14 |
Conread position: | 249-450 |
Cow position: | chr16:4479308-4479104 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 262-445 |
Cow position: | chr16:15476531-15476717 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 156 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 276-450 |
Cow position: | chr16:15237447-15237621 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 95, 54 |
Conread position: | 288-443 |
Cow position: | chr16:30049211-30049364 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 70, 23 |
Conread position: | 294-443 |
Cow position: | chr16:1431906-1432062 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 308-436 |
Cow position: | chr16:41755978-41755847 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 310-450 |
Cow position: | chr16:49256458-49256319 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 49, 29 |
Conread position: | 311-450 |
Cow position: | chr16:37456288-37456147 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 328-446 |
Cow position: | chr16:43852364-43852244 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 31, 39 |
Conread position: | 356-449 |
Cow position: | chr16:1859661-1859755 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 80 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.