Cow genome map
Conread name: | Ss1.1-rcbl0_011794.5 |
Conread position: | 11-165 |
Cow position: | chr17:20402103-20402255 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 14-179 |
Cow position: | chr17:22558020-22558183 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 36, 123 |
Conread position: | 14-204 |
Cow position: | chr17:18193619-18193800 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 137 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 168, 54 |
Conread position: | 14-449 |
Cow position: | chr17:4082076-4082504 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 83 |
Conread position: | 15-444 |
Cow position: | chr17:3708761-3708333 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 61 |
Conread position: | 15-445 |
Cow position: | chr17:19019596-19020020 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 55 |
Conread position: | 15-446 |
Cow position: | chr17:12670053-12669630 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 62 |
Conread position: | 15-449 |
Cow position: | chr17:18300377-18299944 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 59 |
Conread position: | 21-195 |
Cow position: | chr17:152073-151905 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 21-446 |
Cow position: | chr17:14308038-14307619 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 53 |
Conread position: | 21-450 |
Cow position: | chr17:20811870-20811438 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 286 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 36, 50 |
Conread position: | 22-366 |
Cow position: | chr17:40834236-40833891 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 219 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 101, 27 |
Conread position: | 22-448 |
Cow position: | chr17:11026782-11026348 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 280 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 105, 48 |
Conread position: | 22-449 |
Cow position: | chr17:42264948-42265376 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 29 |
Conread position: | 23-398 |
Cow position: | chr17:20488028-20488398 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 265 |
Conread position: | 23-446 |
Cow position: | chr17:1657807-1657396 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 28-433 |
Cow position: | chr17:15384301-15384721 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 34-395 |
Cow position: | chr17:31104142-31103761 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 250 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 119, 136 |
Conread position: | 61-449 |
Cow position: | chr17:15156903-15156516 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 31 |
Conread position: | 122-446 |
Cow position: | chr17:14040904-14040583 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 104 |
Conread position: | 124-444 |
Cow position: | chr17:2174015-2174324 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 306, 7 |
Conread position: | 132-436 |
Cow position: | chr17:2092635-2092319 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 204 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 15, 70 |
Conread position: | 135-283 |
Cow position: | chr17:35592356-35592505 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 11, 25 |
Conread position: | 140-436 |
Cow position: | chr17:6068704-6068998 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 145-450 |
Cow position: | chr17:15850549-15850855 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 14 |
Conread position: | 146-283 |
Cow position: | chr17:20073096-20072957 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 16, 109 |
Conread position: | 146-284 |
Cow position: | chr17:18185385-18185245 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 146-299 |
Cow position: | chr17:13856621-13856468 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 126 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 14, 141 |
Conread position: | 146-341 |
Cow position: | chr17:25737815-25738008 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 154 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 146-436 |
Cow position: | chr17:18103535-18103246 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 25 |
Conread position: | 146-445 |
Cow position: | chr17:3642686-3642383 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 34 |
Conread position: | 146-445 |
Cow position: | chr17:6259994-6260295 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 42 |
Conread position: | 146-445 |
Cow position: | chr17:11087574-11087274 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 34 |
Conread position: | 146-445 |
Cow position: | chr17:24029850-24029557 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 189 |
Conread position: | 146-445 |
Cow position: | chr17:40804969-40805265 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 33 |
Conread position: | 146-450 |
Cow position: | chr17:22132378-22132687 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 147-445 |
Cow position: | chr17:4060248-4060551 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 36 |
Conread position: | 149-444 |
Cow position: | chr17:250310-250612 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 149-444 |
Cow position: | chr17:20087593-20087296 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 26 |
Conread position: | 150-343 |
Cow position: | chr17:2248436-2248243 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 134 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 150-426 |
Cow position: | chr17:19269210-19268935 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 19 |
Conread position: | 150-445 |
Cow position: | chr17:2579771-2580068 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-445 |
Cow position: | chr17:14894309-14894606 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 23 |
Conread position: | 150-451 |
Cow position: | chr17:21354242-21354545 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 199 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 41, 57 |
Conread position: | 151-283 |
Cow position: | chr17:602284-602151 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 152-445 |
Cow position: | chr17:1880248-1880536 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 30 |
Conread position: | 153-283 |
Cow position: | chr17:27345956-27346086 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 12, 116 |
Conread position: | 154-445 |
Cow position: | chr17:16857373-16857073 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 163-342 |
Cow position: | chr17:24634115-24634294 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 163-445 |
Cow position: | chr17:5226784-5227068 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 228 |
Conread position: | 163-446 |
Cow position: | chr17:6119869-6120158 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 163-449 |
Cow position: | chr17:228147-227858 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 163-449 |
Cow position: | chr17:34156289-34156578 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 30 |
Conread position: | 164-325 |
Cow position: | chr17:181524-181684 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 5, 91 |
Conread position: | 164-420 |
Cow position: | chr17:43952402-43952143 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-444 |
Cow position: | chr17:2262263-2262548 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-444 |
Cow position: | chr17:15435952-15436236 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr17:1382653-1382369 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 258 |
Conread position: | 164-449 |
Cow position: | chr17:8209267-8209557 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr17:15143206-15142917 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr17:23324293-23324004 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 89 |
Conread position: | 164-449 |
Cow position: | chr17:31767878-31767589 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 170-444 |
Cow position: | chr17:24782335-24782610 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 149 |
Conread position: | 170-449 |
Cow position: | chr17:14216858-14216583 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 161 |
Conread position: | 170-449 |
Cow position: | chr17:20665558-20665275 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 177-439 |
Cow position: | chr17:38945837-38946095 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 179 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 121 |
Conread position: | 188-439 |
Cow position: | chr17:2030332-2030591 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 175 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 69, 156 |
Conread position: | 195-445 |
Cow position: | chr17:15324021-15324274 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 202-446 |
Cow position: | chr17:151671-151425 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 33 |
Conread position: | 203-444 |
Cow position: | chr17:13695785-13695546 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 172 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 154, 114 |
Conread position: | 206-446 |
Cow position: | chr17:20183643-20183877 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 41 |
Conread position: | 206-449 |
Cow position: | chr17:11376580-11376334 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 209-390 |
Cow position: | chr17:14051903-14051720 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 146 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 91, 50 |
Conread position: | 228-436 |
Cow position: | chr17:18194057-18194269 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 296-449 |
Cow position: | chr17:9081146-9080990 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 331-449 |
Cow position: | chr17:43988829-43988950 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.