Cow genome map


           Conread name:
           Ss1.1-rcbl0_011794.5
        

               Conread position:
               14-141
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               14-192
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               15-218
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               19-450
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 34
               

               Conread position:
               22-147
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               22-391
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               125, 55
               

               Conread position:
               23-397
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               256, 51
               

               Conread position:
               23-416
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               226, 99
               

               Conread position:
               24-443
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 159
               

               Conread position:
               39-436
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               39-446
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               62-436
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               74-449
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               98-450
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               116-382
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               135-353
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               135-450
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               136-445
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 39
               

               Conread position:
               136-445
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 6
               

               Conread position:
               139-445
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               146-284
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 110
               

               Conread position:
               146-284
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-436
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               146-443
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               146-446
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               146-450
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               147-277
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               147-419
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 33
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 15
               

               Conread position:
               148-450
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 19
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-450
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               151-436
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 28
               

               Conread position:
               152-270
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               152-283
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-450
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 106
               

               Conread position:
               163-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 168
               

               Conread position:
               164-271
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-272
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 46
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               170-444
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               170-444
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 128
               

               Conread position:
               170-444
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 81
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               174-443
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               175-436
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               180-443
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               181-436
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               183-428
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               188-444
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 178
               

               Conread position:
               192-449
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               238, 145
               

               Conread position:
               206-309
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               209-434
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               148, 128
               

               Conread position:
               223-444
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               248-431
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               264-449
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 70
               
Show alignments to all cow chromosomes.