Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 150, 10

Conread position: 14-270
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 105

Conread position: 14-435
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 38

Conread position: 14-436
Cow position:
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 52

Conread position: 14-450
Cow position:
Alignm length: 439
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 120

Conread position: 15-326
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 124

Conread position: 15-443
Cow position:
Alignm length: 445
Alignm identity: 286
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 16

Conread position: 15-446
Cow position:
Alignm length: 436
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 59

Conread position: 15-450
Cow position:
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 112

Conread position: 19-436
Cow position:
Alignm length: 422
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 63

Conread position: 20-239
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 121, 0

Conread position: 23-235
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 101

Conread position: 23-444
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 61

Conread position: 24-442
Cow position:
Alignm length: 425
Alignm identity: 292
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 105

Conread position: 27-396
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 90

Conread position: 28-428
Cow position:
Alignm length: 407
Alignm identity: 278
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 42

Conread position: 33-250
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 64

Conread position: 36-421
Cow position:
Alignm length: 395
Alignm identity: 242
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 95

Conread position: 41-282
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 57-449
Cow position:
Alignm length: 396
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 71

Conread position: 64-436
Cow position:
Alignm length: 379
Alignm identity: 247
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 98

Conread position: 71-445
Cow position:
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 75-405
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 94

Conread position: 102-433
Cow position:
Alignm length: 341
Alignm identity: 219
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 186

Conread position: 121-445
Cow position:
Alignm length: 328
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 52

Conread position: 124-450
Cow position:
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 25

Conread position: 129-446
Cow position:
Alignm length: 322
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 274

Conread position: 135-454
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 77

Conread position: 136-283
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 146-270
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 146-436
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 146-445
Cow position:
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 147-443
Cow position:
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 32

Conread position: 147-450
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 32

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 30

Conread position: 150-446
Cow position:
Alignm length: 299
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 151-443
Cow position:
Alignm length: 296
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 28

Conread position: 151-445
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 151-445
Cow position:
Alignm length: 298
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 28

Conread position: 151-445
Cow position:
Alignm length: 298
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 186

Conread position: 152-283
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 152-450
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 161-445
Cow position:
Alignm length: 289
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 18

Conread position: 163-308
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 163-355
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 163-392
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 194, 224

Conread position: 163-444
Cow position:
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 50

Conread position: 164-283
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 203

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 91

Conread position: 166-400
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 166

Conread position: 173-449
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 174-355
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 184-395
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 154

Conread position: 189-447
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 241, 56

Conread position: 206-449
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 221-445
Cow position:
Alignm length: 228
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 137, 116

Conread position: 228-446
Cow position:
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 58

Conread position: 327-445
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 40

Conread position: 338-450
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 53

Show alignments to all cow chromosomes.