Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 1-436
Cow position:
Alignm length: 442
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 9-299
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 11-195
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 11-196
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 53

Conread position: 11-200
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 11-326
Cow position:
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 95

Conread position: 11-386
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 11-442
Cow position:
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 44

Conread position: 11-444
Cow position:
Alignm length: 438
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 86

Conread position: 11-445
Cow position:
Alignm length: 438
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 86

Conread position: 11-449
Cow position:
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 74

Conread position: 14-180
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 14-335
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 82

Conread position: 14-376
Cow position:
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 37

Conread position: 14-394
Cow position:
Alignm length: 384
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 270, 67

Conread position: 14-433
Cow position:
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 63

Conread position: 14-436
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 122

Conread position: 14-445
Cow position:
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 62

Conread position: 15-412
Cow position:
Alignm length: 401
Alignm identity: 257
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 142, 6

Conread position: 17-450
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 66

Conread position: 20-213
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 20-442
Cow position:
Alignm length: 434
Alignm identity: 270
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 10

Conread position: 22-231
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 0

Conread position: 22-347
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 138

Conread position: 22-440
Cow position:
Alignm length: 429
Alignm identity: 282
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 58

Conread position: 22-450
Cow position:
Alignm length: 437
Alignm identity: 276
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 38

Conread position: 23-325
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 208, 51

Conread position: 23-426
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 245, 86

Conread position: 25-436
Cow position:
Alignm length: 415
Alignm identity: 280
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 106

Conread position: 28-444
Cow position:
Alignm length: 419
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 330, 30

Conread position: 31-423
Cow position:
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 53

Conread position: 33-297
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 131, 74

Conread position: 33-427
Cow position:
Alignm length: 401
Alignm identity: 274
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 79

Conread position: 34-395
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 6

Conread position: 38-251
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 40-207
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 136, 0

Conread position: 45-445
Cow position:
Alignm length: 410
Alignm identity: 259
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 8

Conread position: 47-439
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 151, 14

Conread position: 62-399
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 7

Conread position: 66-448
Cow position:
Alignm length: 394
Alignm identity: 249
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 36

Conread position: 68-439
Cow position:
Alignm length: 377
Alignm identity: 239
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 63

Conread position: 68-444
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 77

Conread position: 94-450
Cow position:
Alignm length: 360
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 18

Conread position: 99-435
Cow position:
Alignm length: 344
Alignm identity: 231
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 105, 35

Conread position: 119-439
Cow position:
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 30

Conread position: 123-426
Cow position:
Alignm length: 310
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 21

Conread position: 124-451
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 24

Conread position: 129-388
Cow position:
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 20

Conread position: 129-445
Cow position:
Alignm length: 323
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 52

Conread position: 132-449
Cow position:
Alignm length: 321
Alignm identity: 207
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 70

Conread position: 135-436
Cow position:
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 24

Conread position: 135-445
Cow position:
Alignm length: 314
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 44

Conread position: 139-283
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 136

Conread position: 139-443
Cow position:
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 140-449
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 142-446
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 7

Conread position: 144-436
Cow position:
Alignm length: 296
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 28

Conread position: 145-444
Cow position:
Alignm length: 301
Alignm identity: 194
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 285, 68

Conread position: 146-283
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 146-314
Cow position:
Alignm length: 170
Alignm identity: 139
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 146-417
Cow position:
Alignm length: 276
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 146-427
Cow position:
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 256

Conread position: 146-441
Cow position:
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 146-443
Cow position:
Alignm length: 302
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 137

Conread position: 146-445
Cow position:
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 146-445
Cow position:
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 146-446
Cow position:
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 147-283
Cow position:
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 147-436
Cow position:
Alignm length: 293
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 32

Conread position: 147-444
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 147-444
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 16

Conread position: 147-445
Cow position:
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 147-445
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 103

Conread position: 147-445
Cow position:
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-448
Cow position:
Alignm length: 301
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-450
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 32

Conread position: 150-450
Cow position:
Alignm length: 304
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 22

Conread position: 151-436
Cow position:
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 18

Conread position: 152-283
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 152-424
Cow position:
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 69

Conread position: 152-445
Cow position:
Alignm length: 297
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 27

Conread position: 152-450
Cow position:
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 154-444
Cow position:
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 205, 15

Conread position: 160-296
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 160-443
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 160-445
Cow position:
Alignm length: 289
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 13

Conread position: 161-441
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 8

Conread position: 163-444
Cow position:
Alignm length: 285
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 163-449
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 163-449
Cow position:
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 163-449
Cow position:
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 75

Conread position: 164-272
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 164-309
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 164-325
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 164-414
Cow position:
Alignm length: 252
Alignm identity: 120
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 5, 123

Conread position: 164-443
Cow position:
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-443
Cow position:
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 174

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 135

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 123

Conread position: 169-445
Cow position:
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 13

Conread position: 169-449
Cow position:
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 117

Conread position: 170-444
Cow position:
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 125

Conread position: 170-446
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 23

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 110

Conread position: 173-446
Cow position:
Alignm length: 277
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 10

Conread position: 176-436
Cow position:
Alignm length: 267
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 180-308
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 79

Conread position: 186-445
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 151

Conread position: 197-450
Cow position:
Alignm length: 257
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 6

Conread position: 198-294
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 200-450
Cow position:
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 28

Conread position: 203-449
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 206-433
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 151, 53

Conread position: 206-436
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 51

Conread position: 206-437
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 150, 75

Conread position: 206-445
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 152, 197

Conread position: 208-445
Cow position:
Alignm length: 241
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 209-449
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 121

Conread position: 212-445
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 218, 153

Conread position: 213-446
Cow position:
Alignm length: 242
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 213-446
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 157, 73

Conread position: 216-382
Cow position:
Alignm length: 169
Alignm identity: 140
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 139, 0

Conread position: 223-428
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 34

Conread position: 228-444
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 129, 95

Conread position: 232-444
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 197, 49

Conread position: 239-440
Cow position:
Alignm length: 205
Alignm identity: 162
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 94

Conread position: 269-435
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 50

Conread position: 277-436
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 290-450
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 294-450
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 23

Conread position: 299-449
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 124

Conread position: 312-445
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 333-449
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 338-439
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.