Cow genome map


           Conread name:
           Ss1.1-rcbl0_011794.5
        

               Conread position:
               9-439
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               11-204
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               136, 29
               

               Conread position:
               11-450
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               415, 63
               

               Conread position:
               14-201
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-419
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               343, 41
               

               Conread position:
               14-440
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 63
               

               Conread position:
               15-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 132
               

               Conread position:
               16-315
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               267, 58
               

               Conread position:
               20-433
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               410, 101
               

               Conread position:
               22-238
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 176
               

               Conread position:
               22-431
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               22-434
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               23-196
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               28-256
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               28-436
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               34-443
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               34-444
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               39-398
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 108
               

               Conread position:
               46-451
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 20
               

               Conread position:
               63-444
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               64-444
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               68-416
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               68-446
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 53
               

               Conread position:
               68-449
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               84-450
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               115-421
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               123-446
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               135-283
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               135-445
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 37
               

               Conread position:
               135-445
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               136-351
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 82
               

               Conread position:
               136-436
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 6
               

               Conread position:
               139-445
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               144-283
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 116
               

               Conread position:
               146-275
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-283
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-441
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               147-443
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 32
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 32
               

               Conread position:
               148-398
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               148-446
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 149
               

               Conread position:
               150-439
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 19
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-446
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 36
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 28
               

               Conread position:
               151-453
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 115
               

               Conread position:
               154-446
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 89
               

               Conread position:
               163-287
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-374
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               163-444
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               163-446
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               163-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               163-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               164-381
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               193, 163
               

               Conread position:
               164-431
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 116
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               194-449
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 92
               

               Conread position:
               200-450
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 116
               

               Conread position:
               200-450
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 110
               

               Conread position:
               202-443
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               205-445
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               206-428
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 187
               

               Conread position:
               214-395
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               216-450
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 86
               

               Conread position:
               217-449
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               141, 41
               

               Conread position:
               220-445
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               259-445
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               265-446
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               285-449
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 82
               

               Conread position:
               295-436
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               301-450
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               305-445
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.