Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 2-254
Cow position:
Alignm length: 254
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 187

Conread position: 11-195
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 11-283
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 55, 114

Conread position: 11-418
Cow position:
Alignm length: 410
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 51

Conread position: 11-436
Cow position:
Alignm length: 432
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 63

Conread position: 11-438
Cow position:
Alignm length: 431
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 113

Conread position: 11-450
Cow position:
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 49

Conread position: 11-450
Cow position:
Alignm length: 451
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 44

Conread position: 14-224
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 133, 29

Conread position: 14-450
Cow position:
Alignm length: 439
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 108

Conread position: 15-446
Cow position:
Alignm length: 443
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 19-450
Cow position:
Alignm length: 440
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 104

Conread position: 22-447
Cow position:
Alignm length: 430
Alignm identity: 283
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 224, 29

Conread position: 23-264
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 23-283
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 76

Conread position: 23-442
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 47

Conread position: 23-446
Cow position:
Alignm length: 430
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 100

Conread position: 26-291
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 123, 48

Conread position: 28-387
Cow position:
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 41

Conread position: 29-268
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 29-446
Cow position:
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 93

Conread position: 31-444
Cow position:
Alignm length: 419
Alignm identity: 278
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 29, 53

Conread position: 31-449
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 53

Conread position: 47-447
Cow position:
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 19

Conread position: 68-326
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 35, 67

Conread position: 68-444
Cow position:
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 68-449
Cow position:
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 110-436
Cow position:
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 186

Conread position: 129-445
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 136-445
Cow position:
Alignm length: 313
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 6

Conread position: 139-326
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 35

Conread position: 145-445
Cow position:
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 146-311
Cow position:
Alignm length: 166
Alignm identity: 138
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 146-444
Cow position:
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 121

Conread position: 146-445
Cow position:
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 146-445
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 112

Conread position: 146-446
Cow position:
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 146-450
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 113

Conread position: 147-371
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 214

Conread position: 147-445
Cow position:
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 33

Conread position: 147-445
Cow position:
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 148-283
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 148-424
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 39

Conread position: 149-446
Cow position:
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 104

Conread position: 149-450
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 128

Conread position: 150-443
Cow position:
Alignm length: 297
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-444
Cow position:
Alignm length: 299
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 30

Conread position: 150-445
Cow position:
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 19

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 19

Conread position: 150-446
Cow position:
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 18

Conread position: 151-446
Cow position:
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 145

Conread position: 152-436
Cow position:
Alignm length: 288
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 27

Conread position: 152-445
Cow position:
Alignm length: 297
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 27

Conread position: 154-443
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 131, 21

Conread position: 161-445
Cow position:
Alignm length: 287
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 151

Conread position: 162-443
Cow position:
Alignm length: 286
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 162-450
Cow position:
Alignm length: 296
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 163-449
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 163-449
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 19

Conread position: 164-443
Cow position:
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position:
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 94

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 63

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 96

Conread position: 164-449
Cow position:
Alignm length: 291
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 291
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 124

Conread position: 170-449
Cow position:
Alignm length: 284
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 81

Conread position: 173-449
Cow position:
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 246

Conread position: 176-412
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 25

Conread position: 203-367
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 98, 147

Conread position: 209-443
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 149, 28

Conread position: 209-445
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 138

Conread position: 228-444
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 32

Conread position: 266-449
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 283-449
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 311-449
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 320-445
Cow position:
Alignm length: 129
Alignm identity: 110
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 325-449
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.