Cow genome map


           Conread name:
           Ss1.1-rcbl0_011794.5
        

               Conread position:
               14-446
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 127
               

               Conread position:
               15-237
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               20-446
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               137, 29
               

               Conread position:
               21-292
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               22-419
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               22-448
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               22-449
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 31
               

               Conread position:
               23-273
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 47
               

               Conread position:
               25-436
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 106
               

               Conread position:
               27-449
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               28-443
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 46
               

               Conread position:
               34-444
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               39-428
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               40-373
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               92-443
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               41, 320
               

               Conread position:
               99-407
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 26
               

               Conread position:
               115-432
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 261
               

               Conread position:
               121-445
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 58
               

               Conread position:
               136-445
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 37
               

               Conread position:
               139-445
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               140-444
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 66
               

               Conread position:
               142-445
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 37
               

               Conread position:
               145-445
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               146-273
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               146-371
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               146-374
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               146-405
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-425
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               146-436
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               146-446
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-446
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               147-441
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 61
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               147-446
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 197
               

               Conread position:
               148-266
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               148-446
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 74
               

               Conread position:
               149-449
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 14
               

               Conread position:
               149-450
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               149-450
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 132
               

               Conread position:
               150-294
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               150-382
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               150-436
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 28
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 108
               

               Conread position:
               152-450
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               154-444
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 240
               

               Conread position:
               156-283
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               163-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               164-385
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 163
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               169-444
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 122
               

               Conread position:
               170-439
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 89
               

               Conread position:
               203-445
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               206-449
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               149, 113
               

               Conread position:
               208-446
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 51
               

               Conread position:
               209-445
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 37
               

               Conread position:
               250-429
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 83
               

               Conread position:
               250-446
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               250-446
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               105, 143
               

               Conread position:
               250-450
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               254-446
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               281-445
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               281-447
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               300-449
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 47
               

               Conread position:
               311-450
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               339-445
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               340-450
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 0
               
Show alignments to all cow chromosomes.