Cow genome map


           Conread name:
           Ss1.1-rcbl0_011794.5
        

               Conread position:
               6-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               11-315
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 73
               

               Conread position:
               11-326
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               11-446
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 179
               

               Conread position:
               11-450
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               11-450
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               14-260
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               14-446
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               14-450
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               15-393
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               268, 57
               

               Conread position:
               20-198
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 45
               

               Conread position:
               22-387
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               258, 44
               

               Conread position:
               22-445
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 42
               

               Conread position:
               23-180
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               23-242
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               23-405
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               23-444
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               23-444
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 51
               

               Conread position:
               28-310
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               28-444
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               28-444
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               132, 103
               

               Conread position:
               32-447
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               383, 31
               

               Conread position:
               41-314
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               58-450
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 16
               

               Conread position:
               89-298
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               190, 84
               

               Conread position:
               119-446
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 183
               

               Conread position:
               121-443
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               128-351
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               135-271
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               135-445
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 34
               

               Conread position:
               140-444
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               140-449
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               145-436
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               146-271
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-292
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               146-428
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               146-444
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-450
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 28
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 28
               

               Conread position:
               151-445
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 201
               

               Conread position:
               154-375
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               163-283
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-445
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-443
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 93
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 132
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               165-444
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               169-449
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 81
               

               Conread position:
               170-387
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               177-355
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-412
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               15, 128
               

               Conread position:
               194-432
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 138
               

               Conread position:
               201-444
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               201-450
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               208-445
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               210-443
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               218-315
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               229-449
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 165
               

               Conread position:
               256-446
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               174, 31
               

               Conread position:
               259-409
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 62
               

               Conread position:
               280-443
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               280-449
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               288-449
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               308-449
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               
Show alignments to all cow chromosomes.