Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 1-131
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 69

Conread position: 11-375
Cow position:
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 22-354
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 22-446
Cow position:
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 59

Conread position: 29-282
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 29-434
Cow position:
Alignm length: 415
Alignm identity: 264
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 78

Conread position: 29-450
Cow position:
Alignm length: 430
Alignm identity: 270
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 120

Conread position: 70-443
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 19

Conread position: 74-326
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 21

Conread position: 120-443
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 14

Conread position: 123-450
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 124-443
Cow position:
Alignm length: 327
Alignm identity: 212
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 155, 217

Conread position: 125-313
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 10

Conread position: 135-445
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 24

Conread position: 136-436
Cow position:
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 6

Conread position: 146-256
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 146-443
Cow position:
Alignm length: 302
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 146-443
Cow position:
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 115

Conread position: 146-446
Cow position:
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 141

Conread position: 147-440
Cow position:
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 184

Conread position: 149-433
Cow position:
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 151-445
Cow position:
Alignm length: 298
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 152-283
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 152-450
Cow position:
Alignm length: 302
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 298

Conread position: 163-446
Cow position:
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 164-315
Cow position:
Alignm length: 153
Alignm identity: 125
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 164-444
Cow position:
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 197

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 170

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 87

Conread position: 173-444
Cow position:
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 182-454
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 232, 46

Conread position: 184-445
Cow position:
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 24

Conread position: 207-445
Cow position:
Alignm length: 242
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 91

Conread position: 208-312
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 209-436
Cow position:
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 211-434
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 70

Conread position: 218-444
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 126

Conread position: 223-436
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 193

Conread position: 231-435
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 126, 31

Conread position: 231-450
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 55

Conread position: 240-444
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 25

Conread position: 248-445
Cow position:
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 328-445
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 330-450
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.