Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 14-453
Cow position: chr27:26555521-26555091 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 52

Conread position: 15-442
Cow position: chr27:27498736-27499148 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 82

Conread position: 22-296
Cow position: chr27:27196486-27196220 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 128, 52

Conread position: 22-449
Cow position: chr27:28891736-28892168 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 282
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 43

Conread position: 25-450
Cow position: chr27:22148214-22148640 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 43

Conread position: 55-449
Cow position: chr27:15541493-15541894 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 91

Conread position: 57-323
Cow position: chr27:8567901-8568162 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 135-283
Cow position: chr27:16439585-16439734 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 139-445
Cow position: chr27:14460198-14459889 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 139-445
Cow position: chr27:23335423-23335731 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 40

Conread position: 140-441
Cow position: chr27:25804644-25804344 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 117

Conread position: 146-443
Cow position: chr27:5911128-5911427 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 34

Conread position: 146-443
Cow position: chr27:9992936-9992637 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 34

Conread position: 148-450
Cow position: chr27:15277802-15277497 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 193

Conread position: 150-442
Cow position: chr27:15638099-15637808 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 30

Conread position: 150-445
Cow position: chr27:1209622-1209917 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position: chr27:9329992-9330289 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 19

Conread position: 150-450
Cow position: chr27:893478-893780 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 30

Conread position: 152-444
Cow position: chr27:28078719-28079011 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 32

Conread position: 152-450
Cow position: chr27:27752931-27752641 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 196

Conread position: 164-444
Cow position: chr27:16034118-16033834 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 184-439
Cow position: chr27:24019479-24019221 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 17

Conread position: 200-445
Cow position: chr27:16612599-16612353 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 6, 44

Conread position: 208-428
Cow position: chr27:27663269-27663491 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 208-445
Cow position: chr27:15037264-15037025 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 233

Conread position: 208-445
Cow position: chr27:15046497-15046734 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 50

Conread position: 209-407
Cow position: chr27:14660107-14660306 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 141, 21

Conread position: 211-398
Cow position: chr27:28080628-28080810 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 75

Conread position: 215-445
Cow position: chr27:26325401-26325634 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 218-399
Cow position: chr27:22318083-22318266 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 113

Conread position: 277-446
Cow position: chr27:25433938-25434105 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 40

Conread position: 290-443
Cow position: chr27:27196198-27196048 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 47

Show alignments to all cow chromosomes.