Cow genome map


           Conread name:
           Ss1.1-rcbl0_011794.5
        

               Conread position:
               11-132
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               11-436
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 41
               

               Conread position:
               14-395
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 100
               

               Conread position:
               15-428
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 128
               

               Conread position:
               15-450
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 19
               

               Conread position:
               19-308
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 113
               

               Conread position:
               20-450
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 31
               

               Conread position:
               21-199
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               21-446
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 39
               

               Conread position:
               22-235
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               22-257
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               22-436
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 45
               

               Conread position:
               23-198
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 45
               

               Conread position:
               23-256
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-447
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 151
               

               Conread position:
               28-441
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               399, 47
               

               Conread position:
               28-444
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               30-241
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               30-450
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               112, 15
               

               Conread position:
               33-444
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               158, 77
               

               Conread position:
               39-224
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               39-453
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 16
               

               Conread position:
               41-449
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               56-446
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               73-428
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 51
               

               Conread position:
               119-373
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               233, 43
               

               Conread position:
               134-445
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               135-436
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 44
               

               Conread position:
               139-445
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 41
               

               Conread position:
               145-436
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 14
               

               Conread position:
               145-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 27
               

               Conread position:
               146-278
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               146-284
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               146-423
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               146-436
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 27
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               147-428
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 32
               

               Conread position:
               147-445
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 15
               

               Conread position:
               147-446
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 35
               

               Conread position:
               149-453
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 30
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 22
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 30
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 29
               

               Conread position:
               150-446
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 29
               

               Conread position:
               151-326
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               152-281
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               152-445
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 27
               

               Conread position:
               163-301
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               163-443
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 20
               

               Conread position:
               163-449
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               164-428
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               172-455
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 87
               

               Conread position:
               175-449
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               184-485
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 257
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 72
               

               Conread position:
               199-383
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               199-444
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               208-445
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 108
               

               Conread position:
               209-439
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 170
               

               Conread position:
               211-399
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               146, 71
               

               Conread position:
               224-450
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 32
               

               Conread position:
               228-396
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               128, 77
               

               Conread position:
               242-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               271-445
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               84, 130
               

               Conread position:
               301-446
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               329-445
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               340-428
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               
Show alignments to all cow chromosomes.