Cow genome map


           Conread name:
           Ss1.1-rcbl0_011794.5
        

               Conread position:
               11-445
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 113
               

               Conread position:
               11-450
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 115
               

               Conread position:
               15-250
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 49
               

               Conread position:
               15-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               44, 109
               

               Conread position:
               15-446
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 87
               

               Conread position:
               16-444
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 50
               

               Conread position:
               20-176
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               22-434
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 55
               

               Conread position:
               22-448
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               23-427
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               28-256
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               28-450
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               282
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               29, 55
               

               Conread position:
               62-445
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               64-441
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 20
               

               Conread position:
               101-444
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               102-445
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               187, 67
               

               Conread position:
               111-437
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               47, 58
               

               Conread position:
               135-409
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 44
               

               Conread position:
               135-445
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 115
               

               Conread position:
               136-429
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               139-441
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 205
               

               Conread position:
               139-445
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               139-445
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               140-445
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 39
               

               Conread position:
               145-271
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               146-271
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               146-271
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-283
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               146-283
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-283
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-387
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 223
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               146-445
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               146-450
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               147-436
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               150-427
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 29
               

               Conread position:
               150-436
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 23
               

               Conread position:
               150-439
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 29
               

               Conread position:
               150-441
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 23
               

               Conread position:
               150-444
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 23
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 29
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 19
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 23
               

               Conread position:
               150-449
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               152-428
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 196
               

               Conread position:
               152-445
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 27
               

               Conread position:
               164-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 96
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 137
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-449
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               164-450
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 119
               

               Conread position:
               169-449
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               170-444
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               170-444
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 177
               

               Conread position:
               170-445
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 81
               

               Conread position:
               170-449
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 81
               

               Conread position:
               175-449
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 168
               

               Conread position:
               194-450
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               206-437
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               231-446
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 28
               

               Conread position:
               237-432
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 61
               

               Conread position:
               252-433
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               253-445
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               267-431
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               308-443
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               350-446
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               10, 0
               
Show alignments to all cow chromosomes.