Cow genome map
| Conread name: | Ss1.1-rcbl0_011794.5 |
| Conread position: | 8-435 |
| Cow position: | chr3:43415233-43415640 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 273, 13 |
| Conread position: | 11-380 |
| Cow position: | chr3:24591254-24590898 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 113 |
| Conread position: | 11-390 |
| Cow position: | chr3:64357775-64357411 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 99 |
| Conread position: | 11-436 |
| Cow position: | chr3:4027837-4028223 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 39 |
| Conread position: | 11-441 |
| Cow position: | chr3:66991154-66991573 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 137 |
| Conread position: | 11-446 |
| Cow position: | chr3:6685865-6686302 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 251 |
| Conread position: | 11-449 |
| Cow position: | chr3:15178772-15179195 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 97 |
| Conread position: | 11-450 |
| Cow position: | chr3:52864073-52863635 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 39 |
| Conread position: | 14-123 |
| Cow position: | chr3:5391457-5391565 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 14-224 |
| Cow position: | chr3:54342285-54342082 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 14-446 |
| Cow position: | chr3:46015717-46016130 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 317, 52 |
| Conread position: | 15-442 |
| Cow position: | chr3:75047724-75047315 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 15-446 |
| Cow position: | chr3:42631488-42631914 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 51 |
| Conread position: | 16-299 |
| Cow position: | chr3:19890485-19890216 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 19-450 |
| Cow position: | chr3:2907684-2907275 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 69 |
| Conread position: | 20-284 |
| Cow position: | chr3:50127644-50127375 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 188, 18 |
| Conread position: | 21-175 |
| Cow position: | chr3:29597138-29597293 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 21-196 |
| Cow position: | chr3:36127879-36128049 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 22-224 |
| Cow position: | chr3:19691056-19690871 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 22-435 |
| Cow position: | chr3:21259856-21259437 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 44, 187 |
| Conread position: | 23-367 |
| Cow position: | chr3:18728688-18728363 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 319, 45 |
| Conread position: | 23-442 |
| Cow position: | chr3:57589648-57590066 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 23-444 |
| Cow position: | chr3:19722105-19721671 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 242 |
| Conread position: | 23-444 |
| Cow position: | chr3:49272422-49271998 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 23-449 |
| Cow position: | chr3:12679956-12679524 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 353 |
| Conread position: | 25-436 |
| Cow position: | chr3:18356410-18356016 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 43 |
| Conread position: | 26-290 |
| Cow position: | chr3:21017165-21016905 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 54, 120 |
| Conread position: | 26-428 |
| Cow position: | chr3:32841957-32841552 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 160 |
| Conread position: | 26-446 |
| Cow position: | chr3:24643268-24643681 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 26-449 |
| Cow position: | chr3:42995605-42995183 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 27-449 |
| Cow position: | chr3:83233163-83232746 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 163 |
| Conread position: | 28-443 |
| Cow position: | chr3:32616927-32616507 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 28-444 |
| Cow position: | chr3:37625050-37625463 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 49 |
| Conread position: | 28-444 |
| Cow position: | chr3:70887212-70887633 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 28-446 |
| Cow position: | chr3:31415615-31416025 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 29-450 |
| Cow position: | chr3:48230370-48229971 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 15 |
| Conread position: | 34-450 |
| Cow position: | chr3:71239429-71239019 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 24 |
| Conread position: | 37-278 |
| Cow position: | chr3:6660769-6661006 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 40-439 |
| Cow position: | chr3:58947723-58948113 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 15 |
| Conread position: | 41-445 |
| Cow position: | chr3:5883630-5884033 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 42-446 |
| Cow position: | chr3:3981845-3982238 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 46-445 |
| Cow position: | chr3:5995607-5995206 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 48-444 |
| Cow position: | chr3:4285887-4286286 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 51-428 |
| Cow position: | chr3:79432612-79432243 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 59 |
| Conread position: | 55-432 |
| Cow position: | chr3:20870634-20870230 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 55-436 |
| Cow position: | chr3:70097338-70097708 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 300, 27 |
| Conread position: | 66-441 |
| Cow position: | chr3:49333898-49334274 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 68-443 |
| Cow position: | chr3:32622931-32622550 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 68-449 |
| Cow position: | chr3:37969152-37969538 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 70-428 |
| Cow position: | chr3:26836635-26836319 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 76-436 |
| Cow position: | chr3:42053029-42052666 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 78-444 |
| Cow position: | chr3:21304670-21304304 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 94-436 |
| Cow position: | chr3:46347883-46347542 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 104, 114 |
| Conread position: | 115-450 |
| Cow position: | chr3:18463404-18463073 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 130-441 |
| Cow position: | chr3:63003368-63003057 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 135-270 |
| Cow position: | chr3:5829444-5829308 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 135-428 |
| Cow position: | chr3:77423988-77424284 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 27 |
| Conread position: | 135-445 |
| Cow position: | chr3:59861551-59861861 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 24 |
| Conread position: | 139-445 |
| Cow position: | chr3:57484544-57484236 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 140-444 |
| Cow position: | chr3:36117841-36118149 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 248 |
| Conread position: | 140-446 |
| Cow position: | chr3:14439583-14439271 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 140-449 |
| Cow position: | chr3:24314647-24314959 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 247 |
| Conread position: | 144-446 |
| Cow position: | chr3:45081163-45081471 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 185 |
| Conread position: | 146-271 |
| Cow position: | chr3:41000302-41000428 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 146-283 |
| Cow position: | chr3:5047008-5046869 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 146-283 |
| Cow position: | chr3:31354072-31353933 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 146-403 |
| Cow position: | chr3:42432424-42432684 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 146-445 |
| Cow position: | chr3:594771-595072 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 33 |
| Conread position: | 146-445 |
| Cow position: | chr3:5953993-5953692 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 146-445 |
| Cow position: | chr3:7481039-7480742 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 146-445 |
| Cow position: | chr3:46502726-46503029 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 146-445 |
| Cow position: | chr3:53515806-53516101 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 146-445 |
| Cow position: | chr3:64017172-64016874 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 146-450 |
| Cow position: | chr3:45895365-45895047 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 146-450 |
| Cow position: | chr3:45974690-45975006 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 147-284 |
| Cow position: | chr3:19944237-19944375 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 147-315 |
| Cow position: | chr3:56321493-56321660 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 147-445 |
| Cow position: | chr3:23213879-23213582 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 147-445 |
| Cow position: | chr3:23290150-23289847 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 194 |
| Conread position: | 147-445 |
| Cow position: | chr3:56340233-56339933 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 291 |
| Conread position: | 147-445 |
| Cow position: | chr3:72630264-72630563 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 147-448 |
| Cow position: | chr3:50915519-50915823 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 147-453 |
| Cow position: | chr3:6878860-6878566 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 22 |
| Conread position: | 149-439 |
| Cow position: | chr3:50011867-50012156 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 117 |
| Conread position: | 149-442 |
| Cow position: | chr3:22854305-22854010 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 149-445 |
| Cow position: | chr3:49137341-49137052 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 30 |
| Conread position: | 149-445 |
| Cow position: | chr3:49545015-49544716 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 168 |
| Conread position: | 150-314 |
| Cow position: | chr3:48060633-48060469 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 150-445 |
| Cow position: | chr3:10239852-10240150 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr3:18542209-18541913 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr3:19756760-19756462 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 29 |
| Conread position: | 150-445 |
| Cow position: | chr3:21182488-21182200 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr3:30314766-30315048 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr3:34030700-34030403 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 32 |
| Conread position: | 150-445 |
| Cow position: | chr3:36881723-36881423 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 150-445 |
| Cow position: | chr3:75040971-75040674 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 29 |
| Conread position: | 150-446 |
| Cow position: | chr3:18811699-18811997 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 29 |
| Conread position: | 150-449 |
| Cow position: | chr3:64027895-64027593 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 150-450 |
| Cow position: | chr3:66620371-66620675 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 30 |
| Conread position: | 150-450 |
| Cow position: | chr3:78027211-78026926 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 29 |
| Conread position: | 150-454 |
| Cow position: | chr3:40823586-40823891 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 152-264 |
| Cow position: | chr3:40157311-40157198 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 152-272 |
| Cow position: | chr3:55229501-55229380 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 152-446 |
| Cow position: | chr3:66890770-66890473 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 153-391 |
| Cow position: | chr3:45774210-45773968 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 157-446 |
| Cow position: | chr3:49677996-49678287 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 210 |
| Conread position: | 157-446 |
| Cow position: | chr3:51940215-51939932 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 82 |
| Conread position: | 161-299 |
| Cow position: | chr3:2710734-2710598 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 163-449 |
| Cow position: | chr3:1516359-1516648 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 163-449 |
| Cow position: | chr3:29331067-29330778 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 164-283 |
| Cow position: | chr3:2654319-2654438 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-411 |
| Cow position: | chr3:7168996-7169247 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-444 |
| Cow position: | chr3:20380747-20381031 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-444 |
| Cow position: | chr3:40339908-40339624 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-444 |
| Cow position: | chr3:68873551-68873266 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-446 |
| Cow position: | chr3:45032945-45033231 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 164-449 |
| Cow position: | chr3:2917665-2917953 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 164-449 |
| Cow position: | chr3:3523225-3523512 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 181 |
| Conread position: | 164-449 |
| Cow position: | chr3:18859618-18859907 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 96 |
| Conread position: | 164-449 |
| Cow position: | chr3:19736784-19737073 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr3:22336092-22336381 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr3:41211533-41211242 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr3:46679635-46679923 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 204 |
| Conread position: | 164-449 |
| Cow position: | chr3:46861099-46860810 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr3:49613773-49613483 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr3:68699769-68699473 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 165-434 |
| Cow position: | chr3:33846592-33846322 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 170-443 |
| Cow position: | chr3:64650837-64651113 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 173-449 |
| Cow position: | chr3:6782598-6782876 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 173-449 |
| Cow position: | chr3:19878871-19879150 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 184-404 |
| Cow position: | chr3:74439528-74439750 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 184-450 |
| Cow position: | chr3:19939104-19939372 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 186-450 |
| Cow position: | chr3:18575961-18575701 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 187-398 |
| Cow position: | chr3:77548952-77549160 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 172, 94 |
| Conread position: | 188-441 |
| Cow position: | chr3:54342023-54341772 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 189-444 |
| Cow position: | chr3:48842401-48842659 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 203-450 |
| Cow position: | chr3:52226790-52227037 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 163 |
| Conread position: | 206-445 |
| Cow position: | chr3:77443608-77443845 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 153, 131 |
| Conread position: | 206-449 |
| Cow position: | chr3:47081164-47080918 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 209-434 |
| Cow position: | chr3:52654613-52654392 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 150, 81 |
| Conread position: | 209-445 |
| Cow position: | chr3:4737723-4737484 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 71, 133 |
| Conread position: | 209-449 |
| Cow position: | chr3:27918685-27918927 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 177 |
| Conread position: | 216-446 |
| Cow position: | chr3:29578890-29579124 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 216-449 |
| Cow position: | chr3:7158459-7158223 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 228-447 |
| Cow position: | chr3:3054951-3055162 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 248-446 |
| Cow position: | chr3:60208316-60208116 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 109, 138 |
| Conread position: | 249-446 |
| Cow position: | chr3:51242662-51242862 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 251-404 |
| Cow position: | chr3:45238084-45237929 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 254-406 |
| Cow position: | chr3:3782802-3782954 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 269-449 |
| Cow position: | chr3:47177966-47177783 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 298-446 |
| Cow position: | chr3:65582925-65582774 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 303-450 |
| Cow position: | chr3:2710521-2710371 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 312-449 |
| Cow position: | chr3:56322023-56322163 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 317-443 |
| Cow position: | chr3:48059071-48058942 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 325-450 |
| Cow position: | chr3:38493621-38493748 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 340-450 |
| Cow position: | chr3:64357406-64357292 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.