Cow genome map
Conread name: | Ss1.1-rcbl0_011794.5 |
Conread position: | 12-443 |
Cow position: | chr4:64984218-64984639 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 286 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 157, 21 |
Conread position: | 14-446 |
Cow position: | chr4:60264289-60263863 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 66 |
Conread position: | 14-450 |
Cow position: | chr4:46664383-46664820 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 52 |
Conread position: | 15-428 |
Cow position: | chr4:14374807-14374392 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 6 |
Conread position: | 15-436 |
Cow position: | chr4:34184638-34184244 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 41 |
Conread position: | 15-446 |
Cow position: | chr4:6212040-6211612 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 285 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 340, 68 |
Conread position: | 16-377 |
Cow position: | chr4:11385632-11385969 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 259 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 248, 39 |
Conread position: | 16-446 |
Cow position: | chr4:11837774-11837351 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 297 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 87, 15 |
Conread position: | 22-445 |
Cow position: | chr4:45876791-45876370 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 296 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 197, 44 |
Conread position: | 22-450 |
Cow position: | chr4:39271522-39271082 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 291 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 122, 46 |
Conread position: | 23-315 |
Cow position: | chr4:14549870-14550155 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 221, 13 |
Conread position: | 28-444 |
Cow position: | chr4:54158539-54158926 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 282 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 181, 99 |
Conread position: | 28-447 |
Cow position: | chr4:44925643-44925218 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 297 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 35, 110 |
Conread position: | 29-439 |
Cow position: | chr4:19093289-19093715 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 288 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 33, 47 |
Conread position: | 30-436 |
Cow position: | chr4:38929318-38929709 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 262 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 327, 73 |
Conread position: | 32-450 |
Cow position: | chr4:51043371-51042953 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 143 |
Conread position: | 38-443 |
Cow position: | chr4:968765-968351 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 268 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 129, 31 |
Conread position: | 39-445 |
Cow position: | chr4:28831246-28831640 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 318, 110 |
Conread position: | 41-445 |
Cow position: | chr4:31669165-31669572 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 16 |
Conread position: | 58-436 |
Cow position: | chr4:43454585-43454960 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 263 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 18, 12 |
Conread position: | 62-449 |
Cow position: | chr4:13869945-13870314 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 265 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 18, 81 |
Conread position: | 68-449 |
Cow position: | chr4:32212077-32212465 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 78 |
Conread position: | 74-445 |
Cow position: | chr4:15194541-15194904 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 15 |
Conread position: | 92-450 |
Cow position: | chr4:14821603-14821251 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 55 |
Conread position: | 122-423 |
Cow position: | chr4:60112399-60112111 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 201 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 235, 8 |
Conread position: | 124-424 |
Cow position: | chr4:12607684-12607394 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 85 |
Conread position: | 131-445 |
Cow position: | chr4:26886875-26886561 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 10 |
Conread position: | 136-445 |
Cow position: | chr4:25599512-25599202 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 26 |
Conread position: | 136-448 |
Cow position: | chr4:16359870-16360185 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 6 |
Conread position: | 139-399 |
Cow position: | chr4:33121040-33121303 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 23, 35 |
Conread position: | 139-445 |
Cow position: | chr4:43881099-43881409 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 42 |
Conread position: | 140-449 |
Cow position: | chr4:100950-100636 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 140-449 |
Cow position: | chr4:16326792-16326477 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 144-445 |
Cow position: | chr4:12241220-12240915 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 35 |
Conread position: | 145-445 |
Cow position: | chr4:44725080-44725384 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 36 |
Conread position: | 146-281 |
Cow position: | chr4:66925993-66926130 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 16, 127 |
Conread position: | 146-445 |
Cow position: | chr4:17926257-17925953 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 35 |
Conread position: | 146-445 |
Cow position: | chr4:18516894-18517193 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 170 |
Conread position: | 146-445 |
Cow position: | chr4:31565306-31565008 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 34 |
Conread position: | 146-445 |
Cow position: | chr4:36896367-36896668 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 33 |
Conread position: | 146-445 |
Cow position: | chr4:48026394-48026699 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 147-441 |
Cow position: | chr4:355908-356205 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 150-393 |
Cow position: | chr4:33493828-33494072 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 29 |
Conread position: | 150-398 |
Cow position: | chr4:12587302-12587551 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 23 |
Conread position: | 150-445 |
Cow position: | chr4:6490361-6490066 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 29 |
Conread position: | 150-445 |
Cow position: | chr4:43319643-43319346 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 22 |
Conread position: | 150-445 |
Cow position: | chr4:45049295-45048998 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 22 |
Conread position: | 151-443 |
Cow position: | chr4:4176795-4177087 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 129, 12 |
Conread position: | 152-444 |
Cow position: | chr4:18190403-18190698 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 152-445 |
Cow position: | chr4:41120309-41120616 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 27 |
Conread position: | 161-355 |
Cow position: | chr4:27333441-27333635 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 148 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 163-444 |
Cow position: | chr4:41954483-41954766 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 44 |
Conread position: | 164-347 |
Cow position: | chr4:603002-603187 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 141 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-444 |
Cow position: | chr4:4416091-4416367 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 21 |
Conread position: | 164-444 |
Cow position: | chr4:18424516-18424232 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr4:3125804-3126093 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 164-449 |
Cow position: | chr4:13548038-13548326 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 132 |
Conread position: | 164-453 |
Cow position: | chr4:5880174-5880467 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 234 |
Conread position: | 168-450 |
Cow position: | chr4:11111403-11111117 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 64 |
Conread position: | 169-449 |
Cow position: | chr4:9354761-9354479 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 268 |
Conread position: | 170-299 |
Cow position: | chr4:158531-158660 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 170-363 |
Cow position: | chr4:65223518-65223323 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 152 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 187, 0 |
Conread position: | 170-444 |
Cow position: | chr4:1930608-1930332 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 102 |
Conread position: | 170-444 |
Cow position: | chr4:6268616-6268335 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 173-444 |
Cow position: | chr4:41958148-41958421 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 34 |
Conread position: | 174-444 |
Cow position: | chr4:16056621-16056893 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 72 |
Conread position: | 175-450 |
Cow position: | chr4:9423415-9423146 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 184 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 181, 20 |
Conread position: | 180-444 |
Cow position: | chr4:54050268-54050533 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 174 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 24, 137 |
Conread position: | 182-437 |
Cow position: | chr4:21256382-21256641 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 184-449 |
Cow position: | chr4:61694472-61694226 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 199-445 |
Cow position: | chr4:33072776-33072527 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 199-446 |
Cow position: | chr4:27295468-27295210 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 187 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 208-443 |
Cow position: | chr4:13493369-13493610 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 82 |
Conread position: | 220-445 |
Cow position: | chr4:57984053-57984281 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 275-428 |
Cow position: | chr4:29531753-29531599 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 125 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 81, 113 |
Conread position: | 289-449 |
Cow position: | chr4:529533-529697 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 134 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 295-449 |
Cow position: | chr4:159296-159451 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 62, 142 |
Conread position: | 349-449 |
Cow position: | chr4:27333903-27334006 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 86 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.