Cow genome map
| Conread name: | Ss1.1-rcbl0_011794.5 |
| Conread position: | 11-310 |
| Cow position: | chr5:18272499-18272801 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 163 |
| Conread position: | 11-436 |
| Cow position: | chr5:41528794-41528374 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 96 |
| Conread position: | 11-445 |
| Cow position: | chr5:23228631-23229080 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 155, 27 |
| Conread position: | 14-449 |
| Cow position: | chr5:46660012-46660430 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 52 |
| Conread position: | 15-244 |
| Cow position: | chr5:51164321-51164552 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 210 |
| Conread position: | 16-299 |
| Cow position: | chr5:61272584-61272303 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 108 |
| Conread position: | 16-309 |
| Cow position: | chr5:41961966-41961688 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 58 |
| Conread position: | 22-214 |
| Cow position: | chr5:53626213-53626020 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 130, 100 |
| Conread position: | 22-323 |
| Cow position: | chr5:27058750-27058474 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 22-336 |
| Cow position: | chr5:61362662-61362356 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 22-435 |
| Cow position: | chr5:32309638-32309219 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 22-436 |
| Cow position: | chr5:47074255-47074688 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 22-444 |
| Cow position: | chr5:28023482-28023903 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 22 |
| Conread position: | 23-308 |
| Cow position: | chr5:29435581-29435318 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 23-436 |
| Cow position: | chr5:35525784-35526194 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 183 |
| Conread position: | 23-446 |
| Cow position: | chr5:27002018-27002421 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 32 |
| Conread position: | 24-442 |
| Cow position: | chr5:14785398-14784976 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 79 |
| Conread position: | 25-443 |
| Cow position: | chr5:41957348-41956941 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 30 |
| Conread position: | 33-443 |
| Cow position: | chr5:51336287-51335859 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 117, 102 |
| Conread position: | 34-256 |
| Cow position: | chr5:46630050-46629832 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 34-443 |
| Cow position: | chr5:68470768-68470357 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 35-437 |
| Cow position: | chr5:14658665-14658266 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 41-275 |
| Cow position: | chr5:25000233-25000001 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 41-450 |
| Cow position: | chr5:57715483-57715885 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 45-442 |
| Cow position: | chr5:62360424-62360820 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 47-450 |
| Cow position: | chr5:39247005-39246610 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 6 |
| Conread position: | 56-409 |
| Cow position: | chr5:22842653-22842309 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 68-436 |
| Cow position: | chr5:26079214-26078847 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 68-450 |
| Cow position: | chr5:46644691-46645076 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 88-421 |
| Cow position: | chr5:56857151-56856818 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 119-443 |
| Cow position: | chr5:62911254-62911570 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 239, 50 |
| Conread position: | 128-443 |
| Cow position: | chr5:46738504-46738187 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 131-443 |
| Cow position: | chr5:67593952-67594272 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 284 |
| Conread position: | 135-451 |
| Cow position: | chr5:69621280-69621600 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 136-445 |
| Cow position: | chr5:3504020-3503710 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 136-445 |
| Cow position: | chr5:7273912-7274220 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 43 |
| Conread position: | 139-283 |
| Cow position: | chr5:38842104-38842249 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 139-411 |
| Cow position: | chr5:49119196-49118922 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 140-444 |
| Cow position: | chr5:46776157-46776466 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 146-283 |
| Cow position: | chr5:20971954-20971817 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 146-283 |
| Cow position: | chr5:29009445-29009584 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 146-283 |
| Cow position: | chr5:52805530-52805669 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 146-432 |
| Cow position: | chr5:4385338-4385623 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 146-445 |
| Cow position: | chr5:415630-415328 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 193 |
| Conread position: | 146-445 |
| Cow position: | chr5:10918915-10919214 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 33 |
| Conread position: | 146-445 |
| Cow position: | chr5:34696695-34696992 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 146-445 |
| Cow position: | chr5:73489467-73489166 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 33 |
| Conread position: | 147-280 |
| Cow position: | chr5:27651888-27651754 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 147-308 |
| Cow position: | chr5:49518751-49518926 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 147-403 |
| Cow position: | chr5:6155125-6154869 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 32 |
| Conread position: | 147-444 |
| Cow position: | chr5:31101534-31101237 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 255 |
| Conread position: | 148-326 |
| Cow position: | chr5:32945969-32946147 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-450 |
| Cow position: | chr5:24588850-24589158 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 150-443 |
| Cow position: | chr5:54792537-54792247 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr5:2914546-2914839 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 22 |
| Conread position: | 150-445 |
| Cow position: | chr5:30579420-30579719 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 150-445 |
| Cow position: | chr5:55628084-55628380 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 29 |
| Conread position: | 150-445 |
| Cow position: | chr5:57482448-57482150 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 29 |
| Conread position: | 150-449 |
| Cow position: | chr5:10482938-10483240 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 151-445 |
| Cow position: | chr5:37732445-37732740 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 29 |
| Conread position: | 152-283 |
| Cow position: | chr5:25206585-25206452 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 152-299 |
| Cow position: | chr5:45700365-45700513 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 152-444 |
| Cow position: | chr5:27909180-27908885 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 152-444 |
| Cow position: | chr5:64781918-64781624 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 27 |
| Conread position: | 152-446 |
| Cow position: | chr5:3964544-3964839 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 107 |
| Conread position: | 163-449 |
| Cow position: | chr5:44459586-44459875 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 164-282 |
| Cow position: | chr5:58196105-58196223 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-297 |
| Cow position: | chr5:45182000-45181866 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-301 |
| Cow position: | chr5:47831010-47830872 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-396 |
| Cow position: | chr5:24577018-24577251 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 164-410 |
| Cow position: | chr5:59482357-59482607 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr5:4019095-4018807 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 118 |
| Conread position: | 164-449 |
| Cow position: | chr5:6588917-6588627 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 164 |
| Conread position: | 164-449 |
| Cow position: | chr5:10776161-10775872 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr5:14380252-14380535 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 94 |
| Conread position: | 164-449 |
| Cow position: | chr5:18666097-18666386 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr5:23960212-23959923 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr5:31706677-31706967 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 164-449 |
| Cow position: | chr5:46664106-46664387 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 225 |
| Conread position: | 164-449 |
| Cow position: | chr5:48468176-48467888 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 274 |
| Conread position: | 164-449 |
| Cow position: | chr5:59060721-59061010 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 170-443 |
| Cow position: | chr5:10843309-10843031 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 170-444 |
| Cow position: | chr5:18122358-18122084 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 64 |
| Conread position: | 170-449 |
| Cow position: | chr5:4089181-4089463 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 170-449 |
| Cow position: | chr5:32772592-32772885 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 170-449 |
| Cow position: | chr5:54932108-54931827 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 161 |
| Conread position: | 175-445 |
| Cow position: | chr5:48808616-48808346 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 232 |
| Conread position: | 175-449 |
| Cow position: | chr5:43003212-43003489 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 176-395 |
| Cow position: | chr5:5667937-5667714 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 184-446 |
| Cow position: | chr5:12643596-12643330 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 185-445 |
| Cow position: | chr5:51770818-51770553 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 224 |
| Conread position: | 188-449 |
| Cow position: | chr5:2531387-2531653 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 193-445 |
| Cow position: | chr5:24098807-24099061 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 194-445 |
| Cow position: | chr5:4069355-4069609 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 195-299 |
| Cow position: | chr5:28010741-28010845 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-441 |
| Cow position: | chr5:3786071-3786315 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 194 |
| Conread position: | 203-449 |
| Cow position: | chr5:35300242-35300491 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 206-439 |
| Cow position: | chr5:53625742-53625508 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 211-446 |
| Cow position: | chr5:41555456-41555222 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 89 |
| Conread position: | 228-449 |
| Cow position: | chr5:18663960-18664184 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 229-404 |
| Cow position: | chr5:59144540-59144718 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 230-450 |
| Cow position: | chr5:26084403-26084182 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 126, 29 |
| Conread position: | 249-449 |
| Cow position: | chr5:241391-241594 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 252-443 |
| Cow position: | chr5:3113646-3113834 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 85 |
| Conread position: | 258-449 |
| Cow position: | chr5:46807510-46807704 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 260-410 |
| Cow position: | chr5:26067691-26067537 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 270-446 |
| Cow position: | chr5:18115638-18115461 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 272-444 |
| Cow position: | chr5:58196245-58196418 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 279-453 |
| Cow position: | chr5:29761779-29761948 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 294-436 |
| Cow position: | chr5:45700554-45700699 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 294-445 |
| Cow position: | chr5:28011889-28012043 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 294-446 |
| Cow position: | chr5:41465273-41465427 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 297-449 |
| Cow position: | chr5:47830830-47830676 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 298-450 |
| Cow position: | chr5:49591853-49591691 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 312-450 |
| Cow position: | chr5:32946410-32946551 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 314-436 |
| Cow position: | chr5:41961465-41961340 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 338-445 |
| Cow position: | chr5:1341753-1341643 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 340-449 |
| Cow position: | chr5:45181864-45181752 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.