Cow genome map

Conread name: Ss1.1-rcbl0_011794.5

Conread position: 11-299
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 11-448
Cow position:
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 86

Conread position: 11-449
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 66

Conread position: 11-450
Cow position:
Alignm length: 445
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 307

Conread position: 11-450
Cow position:
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 47

Conread position: 11-450
Cow position:
Alignm length: 447
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 49

Conread position: 12-443
Cow position:
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 17

Conread position: 14-196
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 14-256
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 56

Conread position: 14-299
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 202

Conread position: 14-446
Cow position:
Alignm length: 437
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 62

Conread position: 14-450
Cow position:
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 127

Conread position: 15-298
Cow position:
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 165

Conread position: 21-211
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 21-446
Cow position:
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 10

Conread position: 22-309
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 22-434
Cow position:
Alignm length: 420
Alignm identity: 263
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 48

Conread position: 22-447
Cow position:
Alignm length: 429
Alignm identity: 291
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 335, 48

Conread position: 23-191
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 51

Conread position: 23-443
Cow position:
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 53

Conread position: 23-446
Cow position:
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 202

Conread position: 24-218
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 52

Conread position: 24-284
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 89

Conread position: 32-448
Cow position:
Alignm length: 433
Alignm identity: 276
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 232

Conread position: 34-235
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 24

Conread position: 34-449
Cow position:
Alignm length: 443
Alignm identity: 295
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 37, 207

Conread position: 35-444
Cow position:
Alignm length: 417
Alignm identity: 279
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 103, 31

Conread position: 37-236
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 13

Conread position: 38-444
Cow position:
Alignm length: 417
Alignm identity: 276
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 59

Conread position: 40-451
Cow position:
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 52

Conread position: 45-407
Cow position:
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 66

Conread position: 73-357
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 74-447
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 61

Conread position: 132-445
Cow position:
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 134-445
Cow position:
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 47

Conread position: 135-436
Cow position:
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 24

Conread position: 136-417
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 59

Conread position: 139-436
Cow position:
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 190

Conread position: 139-443
Cow position:
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 85

Conread position: 139-446
Cow position:
Alignm length: 313
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 142-445
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 146-271
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 146-278
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 146-368
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 33

Conread position: 146-427
Cow position:
Alignm length: 285
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 146-429
Cow position:
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 146-441
Cow position:
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 146-445
Cow position:
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 146-445
Cow position:
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 228

Conread position: 147-282
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 147-446
Cow position:
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 84

Conread position: 150-355
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 150-436
Cow position:
Alignm length: 290
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-441
Cow position:
Alignm length: 297
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 32

Conread position: 150-442
Cow position:
Alignm length: 300
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 29

Conread position: 150-445
Cow position:
Alignm length: 299
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 29

Conread position: 150-449
Cow position:
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 180

Conread position: 150-449
Cow position:
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 151-445
Cow position:
Alignm length: 298
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 28

Conread position: 151-445
Cow position:
Alignm length: 300
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 28

Conread position: 151-446
Cow position:
Alignm length: 299
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 28

Conread position: 152-283
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 55

Conread position: 152-436
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 128, 17

Conread position: 152-445
Cow position:
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 27

Conread position: 154-443
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 26

Conread position: 155-266
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 163-449
Cow position:
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 164-433
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 153, 111

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 291
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 274

Conread position: 164-449
Cow position:
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 168-443
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 215

Conread position: 170-312
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 0

Conread position: 170-444
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 187, 100

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 170-449
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 170-449
Cow position:
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 172-450
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 36

Conread position: 173-423
Cow position:
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 175-449
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 80

Conread position: 184-451
Cow position:
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 189-450
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 173, 214

Conread position: 190-445
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 118

Conread position: 194-427
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 165, 27

Conread position: 194-439
Cow position:
Alignm length: 255
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 59

Conread position: 201-444
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 9

Conread position: 203-449
Cow position:
Alignm length: 251
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 206-442
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 53

Conread position: 206-446
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 208-446
Cow position:
Alignm length: 243
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 209-449
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 17

Conread position: 210-446
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 126

Conread position: 212-446
Cow position:
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 104

Conread position: 217-449
Cow position:
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 229-445
Cow position:
Alignm length: 220
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 28

Conread position: 234-445
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 159

Conread position: 235-449
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 37

Conread position: 267-450
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 268-441
Cow position:
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 89, 99

Conread position: 294-439
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 45

Conread position: 296-450
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 17

Conread position: 331-445
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 333-444
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 333-444
Cow position:
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 354-443
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 356-451
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 19

Show alignments to all cow chromosomes.