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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_016468.5.5
        

               
Conread position:
               
369-814
               

               
Cow position:
               
chr18:4954981-4955393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
370-821
               

               
Cow position:
               
chr18:52632935-52632466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 389
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr18:23137720-23137521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
378-653
               

               
Cow position:
               
chr18:36907678-36907401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
378-712
               

               
Cow position:
               
chr18:6322234-6322570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
378-732
               

               
Cow position:
               
chr18:5451439-5451071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
378-781
               

               
Cow position:
               
chr18:4540377-4539979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 18
               

               
Conread position:
               
378-781
               

               
Cow position:
               
chr18:20641982-20641589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
378-789
               

               
Cow position:
               
chr18:6046991-6046571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
378-835
               

               
Cow position:
               
chr18:36912204-36911730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
380-768
               

               
Cow position:
               
chr18:17944361-17944752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
199, 17
               

               
Conread position:
               
380-866
               

               
Cow position:
               
chr18:13270747-13271240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
389-810
               

               
Cow position:
               
chr18:5457745-5457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 20
               

               
Conread position:
               
389-832
               

               
Cow position:
               
chr18:35075899-35076340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
390-623
               

               
Cow position:
               
chr18:51691300-51691068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
390-833
               

               
Cow position:
               
chr18:41837262-41836817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 7
               

               
Conread position:
               
391-684
               

               
Cow position:
               
chr18:16050578-16050288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 91
               

               
Conread position:
               
391-856
               

               
Cow position:
               
chr18:19850238-19849782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 159
               

               
Conread position:
               
392-743
               

               
Cow position:
               
chr18:9855116-9854754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
392-781
               

               
Cow position:
               
chr18:13173018-13172616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
393-712
               

               
Cow position:
               
chr18:8761041-8761352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
186, 80
               

               
Conread position:
               
397-554
               

               
Cow position:
               
chr18:14127429-14127273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
397-556
               

               
Cow position:
               
chr18:9365403-9365562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-570
               

               
Cow position:
               
chr18:26355544-26355374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr18:44484540-44484364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr18:46873520-46873695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr18:24635533-24635717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr18:33851741-33851914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr18:48291366-48291190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
397-582
               

               
Cow position:
               
chr18:10097671-10097864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
397-597
               

               
Cow position:
               
chr18:19462140-19462343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-599
               

               
Cow position:
               
chr18:29585752-29585553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr18:6441710-6441918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr18:6733113-6732905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr18:16462795-16462587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr18:23688036-23687828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr18:32209944-32209737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
179, 17
               

               
Conread position:
               
397-603
               

               
Cow position:
               
chr18:17927657-17927866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-605
               

               
Cow position:
               
chr18:33523092-33523305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
136, 143
               

               
Conread position:
               
397-606
               

               
Cow position:
               
chr18:51698499-51698710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-612
               

               
Cow position:
               
chr18:30406507-30406289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-615
               

               
Cow position:
               
chr18:53829646-53829425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
138, 205
               

               
Conread position:
               
397-617
               

               
Cow position:
               
chr18:19761018-19761242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr18:16094738-16094963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr18:28925599-28925372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr18:45886729-45886500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr18:54928540-54928317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr18:5185531-5185303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr18:21738238-21738466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr18:26568440-26568668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr18:32876159-32876380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
179, 166
               

               
Conread position:
               
397-623
               

               
Cow position:
               
chr18:42629224-42629453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-657
               

               
Cow position:
               
chr18:4496667-4496408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
397-676
               

               
Cow position:
               
chr18:23659046-23658764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-684
               

               
Cow position:
               
chr18:10084038-10084324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
397-693
               

               
Cow position:
               
chr18:4556873-4556572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr18:26242600-26242279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-702
               

               
Cow position:
               
chr18:30216075-30216382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
397-702
               

               
Cow position:
               
chr18:55699659-55699354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
397-704
               

               
Cow position:
               
chr18:16082346-16082656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
175, 155
               

               
Conread position:
               
397-707
               

               
Cow position:
               
chr18:16782144-16781833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
397-707
               

               
Cow position:
               
chr18:45902093-45901781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
397-721
               

               
Cow position:
               
chr18:37153574-37153252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-725
               

               
Cow position:
               
chr18:10897174-10897497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
397-726
               

               
Cow position:
               
chr18:54065220-54064886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
182, 258
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr18:34051104-34050763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-736
               

               
Cow position:
               
chr18:32860156-32860499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
397-739
               

               
Cow position:
               
chr18:8967517-8967858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 163
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:1611275-1611627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:11251522-11251170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:18215162-18214810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:25006068-25005716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:26485255-26485607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:27798292-27797940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:27995539-27995891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:28086675-28087027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:30677174-30677526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:31139609-31139961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:31201889-31202241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:33616562-33616210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:37314866-37314514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:40059536-40059888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:42421892-42421540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:43538977-43539329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:51579925-51579573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:51601807-51601455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:54071971-54071619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:55417842-55418194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 253
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr18:55436274-55435922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
397-751
               

               
Cow position:
               
chr18:25165015-25164657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
177, 106
               

               
Conread position:
               
397-752
               

               
Cow position:
               
chr18:31309635-31309998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
397-753
               

               
Cow position:
               
chr18:6878114-6877745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 96
               

               
Conread position:
               
397-754
               

               
Cow position:
               
chr18:3805446-3805801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr18:11271145-11270776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr18:23949897-23949529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr18:24036991-24036623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr18:34056484-34056116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr18:43075777-43076143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
175, 89
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr18:43473446-43473804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
175, 65
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:4432586-4432954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:16857645-16858014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:29079597-29079966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:33907698-33907329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:42608816-42608446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 258
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:50092588-50092242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:51346148-51346517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr18:52574963-52575332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr18:3190604-3190973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 225
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr18:52629398-52629028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr18:27529877-27530247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
181, 247
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr18:27990617-27990985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 0
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr18:28968429-28968058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 257
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr18:32218740-32218373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr18:36336211-36335851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
175, 235
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr18:45981355-45981710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
397-762
               

               
Cow position:
               
chr18:35295074-35295447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:7930628-7930253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:10574566-10574940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 296
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:19356383-19356761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
176, 229
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:24548009-24547629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:27102835-27103211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:30386145-30385765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:40253141-40252762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:42425432-42425810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr18:43430858-43431237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 229
               

               
Conread position:
               
397-772
               

               
Cow position:
               
chr18:81278-81648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 21
               

               
Conread position:
               
397-773
               

               
Cow position:
               
chr18:40195971-40196357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
397-773
               

               
Cow position:
               
chr18:51458985-51458600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-774
               

               
Cow position:
               
chr18:9007661-9008035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 253
               

               
Conread position:
               
397-775
               

               
Cow position:
               
chr18:4926591-4926970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 98
               

               
Conread position:
               
397-776
               

               
Cow position:
               
chr18:2609205-2608831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
397-776
               

               
Cow position:
               
chr18:30186405-30186014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 273
               

               
Conread position:
               
397-778
               

               
Cow position:
               
chr18:50114428-50114035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-779
               

               
Cow position:
               
chr18:7050465-7050855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
180, 58
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr18:25957953-25958343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr18:37691083-37690711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 85
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr18:51666064-51666448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr18:21721767-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-786
               

               
Cow position:
               
chr18:36224294-36224677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 213
               

               
Conread position:
               
397-786
               

               
Cow position:
               
chr18:45979217-45979605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 235
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr18:3179933-3180328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 337
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr18:22591612-22591212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr18:26306125-26306528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
101, 224
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr18:35637673-35638067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr18:41238385-41238781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
176, 213
               

               
Conread position:
               
397-791
               

               
Cow position:
               
chr18:602606-602204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-791
               

               
Cow position:
               
chr18:13977187-13977582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 201
               

               
Conread position:
               
397-801
               

               
Cow position:
               
chr18:39709403-39709812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 341
               

               
Conread position:
               
397-803
               

               
Cow position:
               
chr18:33756404-33756801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
397-804
               

               
Cow position:
               
chr18:24342137-24342543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
397-807
               

               
Cow position:
               
chr18:21251508-21251909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 71
               

               
Conread position:
               
397-808
               

               
Cow position:
               
chr18:16044636-16044222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 120
               

               
Conread position:
               
397-810
               

               
Cow position:
               
chr18:18919425-18919025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 137
               

               
Conread position:
               
397-810
               

               
Cow position:
               
chr18:22275529-22275103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 232
               

               
Conread position:
               
397-820
               

               
Cow position:
               
chr18:35012792-35012376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
397-820
               

               
Cow position:
               
chr18:45572612-45573049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
397-822
               

               
Cow position:
               
chr18:43563736-43564172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 71
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr18:42966351-42966811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-828
               

               
Cow position:
               
chr18:10655970-10656383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 70
               

               
Conread position:
               
397-828
               

               
Cow position:
               
chr18:25924236-25924671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 256
               

               
Conread position:
               
397-831
               

               
Cow position:
               
chr18:601657-601231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 224
               

               
Conread position:
               
397-831
               

               
Cow position:
               
chr18:35057860-35058292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 99
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr18:23802880-23803313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 67
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr18:36512487-36512931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 258
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr18:54033555-54033993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 230
               

               
Conread position:
               
397-835
               

               
Cow position:
               
chr18:33793211-33793658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 302
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr18:4380829-4381259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr18:24021904-24022353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 169
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr18:55768667-55768199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 424
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr18:56151141-56150678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 126
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr18:29862749-29862291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 197
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr18:55555110-55555568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr18:7955660-7956117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 226
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr18:7964744-7965203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 303
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr18:40758725-40759178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 229
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr18:43284236-43283785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
397-858
               

               
Cow position:
               
chr18:7946892-7947363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 62
               

               
Conread position:
               
397-858
               

               
Cow position:
               
chr18:43950353-43950799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
397-866
               

               
Cow position:
               
chr18:22396570-22396089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
398-539
               

               
Cow position:
               
chr18:27457240-27457101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
398-592
               

               
Cow position:
               
chr18:4578981-4578786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
398-597
               

               
Cow position:
               
chr18:18831550-18831752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 151
               

               
Conread position:
               
398-676
               

               
Cow position:
               
chr18:17454156-17453887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
398-737
               

               
Cow position:
               
chr18:36346557-36346204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
398-778
               

               
Cow position:
               
chr18:29768422-29768812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 230
               

               
Conread position:
               
398-804
               

               
Cow position:
               
chr18:16227081-16227488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 93
               

               
Conread position:
               
398-849
               

               
Cow position:
               
chr18:4858379-4857937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
398-850
               

               
Cow position:
               
chr18:55692325-55692781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 235
               

               
Conread position:
               
399-780
               

               
Cow position:
               
chr18:51179220-51178846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
400-773
               

               
Cow position:
               
chr18:27540284-27540668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
400-829
               

               
Cow position:
               
chr18:52635565-52635128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 222
               

               
Conread position:
               
401-657
               

               
Cow position:
               
chr18:13877218-13876953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
401-788
               

               
Cow position:
               
chr18:52455282-52454902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
6, 168
               

               
Conread position:
               
401-866
               

               
Cow position:
               
chr18:55547558-55547090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
402-857
               

               
Cow position:
               
chr18:35636829-35636374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 302
               

               
Conread position:
               
403-664
               

               
Cow position:
               
chr18:2864687-2864425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
403-759
               

               
Cow position:
               
chr18:19320497-19320861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
403-773
               

               
Cow position:
               
chr18:32908416-32908783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
403-823
               

               
Cow position:
               
chr18:20125827-20126248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 66
               

               
Conread position:
               
403-856
               

               
Cow position:
               
chr18:7950627-7951086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 343
               

               
Conread position:
               
404-555
               

               
Cow position:
               
chr18:39875771-39875620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-572
               

               
Cow position:
               
chr18:35443510-35443342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-573
               

               
Cow position:
               
chr18:36233011-36232842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-573
               

               
Cow position:
               
chr18:37339371-37339193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr18:1144693-1144522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr18:25206777-25206607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr18:28929578-28929406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr18:33157310-33157474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr18:33158389-33158566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
404-576
               

               
Cow position:
               
chr18:727153-727325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-580
               

               
Cow position:
               
chr18:29043866-29043684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
404-587
               

               
Cow position:
               
chr18:29241154-29241346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
404-592
               

               
Cow position:
               
chr18:11680210-11680397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
179, 172
               

               
Conread position:
               
404-599
               

               
Cow position:
               
chr18:36777173-36777370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
404-600
               

               
Cow position:
               
chr18:1955004-1954805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
404-601
               

               
Cow position:
               
chr18:268529-268332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-602
               

               
Cow position:
               
chr18:12123416-12123215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
404-602
               

               
Cow position:
               
chr18:16154976-16154775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-602
               

               
Cow position:
               
chr18:28292239-28292037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
404-613
               

               
Cow position:
               
chr18:52854371-52854584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
404-617
               

               
Cow position:
               
chr18:6829544-6829326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
404-617
               

               
Cow position:
               
chr18:18990927-18990712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
172, 94
               

               
Conread position:
               
404-621
               

               
Cow position:
               
chr18:27833559-27833339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
404-623
               

               
Cow position:
               
chr18:15678860-15679077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-625
               

               
Cow position:
               
chr18:21767730-21767505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
404-627
               

               
Cow position:
               
chr18:28530587-28530355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
404-646
               

               
Cow position:
               
chr18:30876411-30876161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 179
               

               
Conread position:
               
404-646
               

               
Cow position:
               
chr18:55030278-55030525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
404-660
               

               
Cow position:
               
chr18:49227207-49227471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 224
               

               
Conread position:
               
404-666
               

               
Cow position:
               
chr18:50789587-50789847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
404-670
               

               
Cow position:
               
chr18:48451194-48451458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 240
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr18:12585620-12585347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 218
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr18:14048996-14049277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 260
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr18:20226628-20226348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr18:41072380-41072663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
404-688
               

               
Cow position:
               
chr18:11262483-11262766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
404-688
               

               
Cow position:
               
chr18:12679501-12679797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
404-695
               

               
Cow position:
               
chr18:16378490-16378785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
404-701
               

               
Cow position:
               
chr18:14121596-14121897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 229
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr18:51191232-51190934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 141
               

               
Conread position:
               
404-710
               

               
Cow position:
               
chr18:24712155-24711845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 292
               

               
Conread position:
               
404-710
               

               
Cow position:
               
chr18:45401220-45401528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 281
               

               
Conread position:
               
404-712
               

               
Cow position:
               
chr18:30853315-30853005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
404-713
               

               
Cow position:
               
chr18:52656712-52657023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 303
               

               
Conread position:
               
404-721
               

               
Cow position:
               
chr18:30420939-30420626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
404-729
               

               
Cow position:
               
chr18:45478454-45478774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
404-730
               

               
Cow position:
               
chr18:24293372-24293699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
404-730
               

               
Cow position:
               
chr18:52595916-52596239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
298, 173
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr18:22569507-22569180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr18:27800012-27799682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr18:89990-90299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr18:19199705-19200042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr18:55119390-55119732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
404-735
               

               
Cow position:
               
chr18:20195988-20195649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
404-735
               

               
Cow position:
               
chr18:31997009-31997330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 147
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr18:9355747-9355414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr18:17324240-17324569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr18:21609297-21608952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr18:23631058-23630719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 260
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr18:54031224-54031564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr18:9712564-9712906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr18:17341804-17342153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 149
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr18:22065847-22065505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr18:38090065-38089709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 352
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr18:52856822-52856502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
404-738
               

               
Cow position:
               
chr18:29013494-29013146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
404-739
               

               
Cow position:
               
chr18:7076290-7076627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 68
               

               
Conread position:
               
404-741
               

               
Cow position:
               
chr18:23700349-23700009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 250
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr18:26883589-26883933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
168, 250
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr18:32019999-32019654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr18:56017587-56017248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-755
               

               
Cow position:
               
chr18:38157684-38157325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 19
               

               
Conread position:
               
404-757
               

               
Cow position:
               
chr18:22181586-22181227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-757
               

               
Cow position:
               
chr18:37733558-37733919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr18:29072283-29072645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr18:35364250-35363891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr18:42223854-42224221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
173, 222
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr18:22391185-22390823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 300
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr18:25355382-25355745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr18:6665834-6665477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
173, 82
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr18:26822463-26822826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr18:36524681-36524327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 112
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr18:11308932-11309307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr18:27555035-27554662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
404-769
               

               
Cow position:
               
chr18:31082815-31082442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
404-772
               

               
Cow position:
               
chr18:35752130-35751773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 159
               

               
Conread position:
               
404-773
               

               
Cow position:
               
chr18:1733647-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
328, 54
               

               
Conread position:
               
404-773
               

               
Cow position:
               
chr18:22790547-22790181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 74
               

               
Conread position:
               
404-774
               

               
Cow position:
               
chr18:50637942-50637566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 336
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr18:7649512-7649894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 272
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr18:8624464-8624082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr18:9974805-9974427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr18:17002181-17002564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr18:13293029-13293410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 219
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr18:56168397-56168019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 145
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr18:28101146-28101539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr18:28658388-28658001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 162
               

               
Conread position:
               
404-794
               

               
Cow position:
               
chr18:33274814-33275222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
404-796
               

               
Cow position:
               
chr18:55782906-55782503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 354
               

               
Conread position:
               
404-807
               

               
Cow position:
               
chr18:11183459-11183874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
404-807
               

               
Cow position:
               
chr18:11779187-11779582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 43
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr18:1494810-1495235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr18:12118324-12117914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 48
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr18:50082709-50082320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 25
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr18:50851807-50851402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 283
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr18:51756619-51757027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
404-813
               

               
Cow position:
               
chr18:11376885-11377299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 170
               

               
Conread position:
               
404-815
               

               
Cow position:
               
chr18:25003362-25002943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 295
               

               
Conread position:
               
404-819
               

               
Cow position:
               
chr18:47183764-47183343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
404-824
               

               
Cow position:
               
chr18:4315825-4316256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 36
               

               
Conread position:
               
404-824
               

               
Cow position:
               
chr18:31672987-31672565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 135
               

               
Conread position:
               
404-824
               

               
Cow position:
               
chr18:51406371-51405959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 133
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr18:10861891-10861484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 64
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr18:11866869-11867282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr18:14048242-14048654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 82
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr18:19159442-19159027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr18:55589954-55589541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
404-833
               

               
Cow position:
               
chr18:16172751-16172316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 250
               

               
Conread position:
               
404-833
               

               
Cow position:
               
chr18:51485454-51485888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 405
               

               
Conread position:
               
404-835
               

               
Cow position:
               
chr18:40203275-40202849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
404-835
               

               
Cow position:
               
chr18:45904377-45903939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
404-839
               

               
Cow position:
               
chr18:16045479-16045040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 89
               

               
Conread position:
               
404-840
               

               
Cow position:
               
chr18:29387757-29388181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
404-842
               

               
Cow position:
               
chr18:49543010-49543438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 89
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr18:26938506-26938946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr18:30793980-30794392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr18:14815821-14815377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 294
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr18:29058961-29058529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 57
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr18:29357118-29356659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr18:47314778-47314315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 336
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr18:51211687-51212149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr18:54574798-54574354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
404-856
               

               
Cow position:
               
chr18:19645695-19646146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 249
               

               
Conread position:
               
404-858
               

               
Cow position:
               
chr18:33299429-33299879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
404-864
               

               
Cow position:
               
chr18:33407158-33407595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
300, 80
               

               
Conread position:
               
404-868
               

               
Cow position:
               
chr18:30248597-30248155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
168, 48
               

               
Conread position:
               
404-890
               

               
Cow position:
               
chr18:37002155-37002636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 130
               

               
Conread position:
               
405-579
               

               
Cow position:
               
chr18:39115644-39115470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-592
               

               
Cow position:
               
chr18:36649243-36649438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
405-598
               

               
Cow position:
               
chr18:4102999-4103196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
405-625
               

               
Cow position:
               
chr18:32283397-32283616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
405-658
               

               
Cow position:
               
chr18:55014912-55015173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
405-698
               

               
Cow position:
               
chr18:19310043-19309754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
405-719
               

               
Cow position:
               
chr18:52899588-52899909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
405-731
               

               
Cow position:
               
chr18:4672864-4673164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
405-760
               

               
Cow position:
               
chr18:27428967-27429327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 114
               

               
Conread position:
               
405-760
               

               
Cow position:
               
chr18:28539866-28539509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 222
               

               
Conread position:
               
405-763
               

               
Cow position:
               
chr18:23765478-23765118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
405-781
               

               
Cow position:
               
chr18:27194374-27194738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
168, 80
               

               
Conread position:
               
405-810
               

               
Cow position:
               
chr18:42747097-42747524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 237
               

               
Conread position:
               
405-822
               

               
Cow position:
               
chr18:33606152-33606576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
405-824
               

               
Cow position:
               
chr18:36458449-36458879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 303
               

               
Conread position:
               
405-829
               

               
Cow position:
               
chr18:32284916-32285340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
405-829
               

               
Cow position:
               
chr18:32301061-32301485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
405-831
               

               
Cow position:
               
chr18:2270982-2270555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 217
               

               
Conread position:
               
405-856
               

               
Cow position:
               
chr18:39002280-39001832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 263
               

               
Conread position:
               
405-859
               

               
Cow position:
               
chr18:25626545-25626996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
405-890
               

               
Cow position:
               
chr18:44262136-44262637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 225
               

               
Conread position:
               
406-579
               

               
Cow position:
               
chr18:21265985-21266157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
406-643
               

               
Cow position:
               
chr18:9557506-9557271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
406-664
               

               
Cow position:
               
chr18:29484823-29484565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
406-733
               

               
Cow position:
               
chr18:19115936-19115602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 258
               

               
Conread position:
               
406-738
               

               
Cow position:
               
chr18:29065841-29065517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
406-759
               

               
Cow position:
               
chr18:1859701-1859342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 287
               

               
Conread position:
               
406-769
               

               
Cow position:
               
chr18:3193255-3193592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
406-781
               

               
Cow position:
               
chr18:4323072-4323455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
406-782
               

               
Cow position:
               
chr18:16134794-16134405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
406-827
               

               
Cow position:
               
chr18:17004776-17005206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 162
               

               
Conread position:
               
406-848
               

               
Cow position:
               
chr18:29648311-29648747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 210
               

               
Conread position:
               
406-850
               

               
Cow position:
               
chr18:4182678-4182222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
406-850
               

               
Cow position:
               
chr18:37024034-37023585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 211
               

               
Conread position:
               
407-737
               

               
Cow position:
               
chr18:22874388-22874729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 243
               

               
Conread position:
               
407-819
               

               
Cow position:
               
chr18:49655234-49655641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 225
               

               
Conread position:
               
408-625
               

               
Cow position:
               
chr18:35876413-35876184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
408-676
               

               
Cow position:
               
chr18:33056779-33057056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
408-687
               

               
Cow position:
               
chr18:14404049-14403762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
408-687
               

               
Cow position:
               
chr18:42361338-42361053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 157
               

               
Conread position:
               
408-689
               

               
Cow position:
               
chr18:28189306-28189025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
408-730
               

               
Cow position:
               
chr18:38665134-38664800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 254
               

               
Conread position:
               
408-735
               

               
Cow position:
               
chr18:37334636-37334961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
408-736
               

               
Cow position:
               
chr18:14479988-14480328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
408-736
               

               
Cow position:
               
chr18:32280816-32281150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
408-737
               

               
Cow position:
               
chr18:31003250-31002925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
408-778
               

               
Cow position:
               
chr18:4152983-4152629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
408-789
               

               
Cow position:
               
chr18:27388080-27388461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
408-813
               

               
Cow position:
               
chr18:16418168-16417768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 9
               

               
Conread position:
               
408-835
               

               
Cow position:
               
chr18:45570553-45570968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 17
               

               
Conread position:
               
409-575
               

               
Cow position:
               
chr18:10890775-10890940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
409-612
               

               
Cow position:
               
chr18:21204921-21205120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
409-662
               

               
Cow position:
               
chr18:6058671-6058424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
409-677
               

               
Cow position:
               
chr18:14184556-14184823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
409-688
               

               
Cow position:
               
chr18:4254402-4254124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 210
               

               
Conread position:
               
409-735
               

               
Cow position:
               
chr18:21938874-21939209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 220
               

               
Conread position:
               
409-736
               

               
Cow position:
               
chr18:54085027-54084688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 323
               

               
Conread position:
               
409-742
               

               
Cow position:
               
chr18:33272471-33272803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 282
               

               
Conread position:
               
409-818
               

               
Cow position:
               
chr18:3098786-3098378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
409-822
               

               
Cow position:
               
chr18:9089231-9089642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 147
               

               
Conread position:
               
409-825
               

               
Cow position:
               
chr18:19193820-19193419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 186
               

               
Conread position:
               
409-850
               

               
Cow position:
               
chr18:9066242-9066663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
410-693
               

               
Cow position:
               
chr18:21106632-21106348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
410-712
               

               
Cow position:
               
chr18:49156481-49156177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 217
               

               
Conread position:
               
410-789
               

               
Cow position:
               
chr18:28767893-28768272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 212
               

               
Conread position:
               
411-621
               

               
Cow position:
               
chr18:10292602-10292815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
411-735
               

               
Cow position:
               
chr18:49781420-49781105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
411-736
               

               
Cow position:
               
chr18:45577105-45576751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
412-602
               

               
Cow position:
               
chr18:5536846-5537038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
165, 111
               

               
Conread position:
               
412-736
               

               
Cow position:
               
chr18:24672139-24671828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
412-753
               

               
Cow position:
               
chr18:5786566-5786911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
168, 243
               

               
Conread position:
               
413-677
               

               
Cow position:
               
chr18:52803379-52803646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 169
               

               
Conread position:
               
413-735
               

               
Cow position:
               
chr18:50993746-50993412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
413-742
               

               
Cow position:
               
chr18:40141360-40141026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
413-768
               

               
Cow position:
               
chr18:215506-215143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
414-789
               

               
Cow position:
               
chr18:49161926-49161535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
415-654
               

               
Cow position:
               
chr18:17757374-17757126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
415-660
               

               
Cow position:
               
chr18:4950083-4950329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 206
               

               
Conread position:
               
415-725
               

               
Cow position:
               
chr18:16163542-16163217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
416-575
               

               
Cow position:
               
chr18:4765769-4765604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
417-627
               

               
Cow position:
               
chr18:37861899-37861681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 201
               

               
Conread position:
               
417-762
               

               
Cow position:
               
chr18:8988874-8989225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
5, 173
               

               
Conread position:
               
418-803
               

               
Cow position:
               
chr18:7965805-7966177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
419-835
               

               
Cow position:
               
chr18:22092322-22092733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
420-615
               

               
Cow position:
               
chr18:51749385-51749194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
421-789
               

               
Cow position:
               
chr18:45168370-45168746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
421-825
               

               
Cow position:
               
chr18:51713172-51712755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 414
               

               
Conread position:
               
422-758
               

               
Cow position:
               
chr18:54656823-54657172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
422-773
               

               
Cow position:
               
chr18:23466337-23466696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
422-791
               

               
Cow position:
               
chr18:26573099-26572723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
423-575
               

               
Cow position:
               
chr18:21184869-21185021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-681
               

               
Cow position:
               
chr18:51679334-51679073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
423-754
               

               
Cow position:
               
chr18:15172584-15172905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 70
               

               
Conread position:
               
423-789
               

               
Cow position:
               
chr18:37021465-37021843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 250
               

               
Conread position:
               
423-807
               

               
Cow position:
               
chr18:4707747-4707354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
423-820
               

               
Cow position:
               
chr18:11322128-11322537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
423-825
               

               
Cow position:
               
chr18:51691929-51691517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 346
               

               
Conread position:
               
424-595
               

               
Cow position:
               
chr18:26295239-26295065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
424-646
               

               
Cow position:
               
chr18:24267302-24267077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
424-731
               

               
Cow position:
               
chr18:19640339-19640652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 106
               

               
Conread position:
               
424-740
               

               
Cow position:
               
chr18:38686642-38686952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
152, 82
               

               
Conread position:
               
424-742
               

               
Cow position:
               
chr18:45646564-45646241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
153, 188
               

               
Conread position:
               
424-766
               

               
Cow position:
               
chr18:3416715-3417058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
424-803
               

               
Cow position:
               
chr18:20864526-20864915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 159
               

               
Conread position:
               
424-810
               

               
Cow position:
               
chr18:6290319-6290718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
424-857
               

               
Cow position:
               
chr18:55552505-55552939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 376
               

               
Conread position:
               
425-594
               

               
Cow position:
               
chr18:30607873-30608045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr18:5186599-5186276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr18:23660851-23661175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr18:54365647-54365324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-823
               

               
Cow position:
               
chr18:5190138-5189744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 196
               

               
Conread position:
               
425-832
               

               
Cow position:
               
chr18:3159058-3158649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
425-833
               

               
Cow position:
               
chr18:44235739-44236155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 394
               

               
Conread position:
               
425-856
               

               
Cow position:
               
chr18:22121339-22120914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 324
               

               
Conread position:
               
426-670
               

               
Cow position:
               
chr18:28820294-28820048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
153, 128
               

               
Conread position:
               
427-760
               

               
Cow position:
               
chr18:20329264-20328926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
427-800
               

               
Cow position:
               
chr18:21527952-21528328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
427-849
               

               
Cow position:
               
chr18:6103559-6103133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
251, 104
               

               
Conread position:
               
428-743
               

               
Cow position:
               
chr18:26001818-26001501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
429-758
               

               
Cow position:
               
chr18:24599997-24599661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
432-742
               

               
Cow position:
               
chr18:17349550-17349866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
432-759
               

               
Cow position:
               
chr18:4725933-4725601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
141, 326
               

               
Conread position:
               
432-824
               

               
Cow position:
               
chr18:7486800-7487196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 353
               

               
Conread position:
               
432-825
               

               
Cow position:
               
chr18:12241819-12242222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
432-826
               

               
Cow position:
               
chr18:36097765-36098151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 145
               

               
Conread position:
               
433-622
               

               
Cow position:
               
chr18:52243492-52243684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
433-675
               

               
Cow position:
               
chr18:30360574-30360326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
433-742
               

               
Cow position:
               
chr18:48818708-48818385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
434-673
               

               
Cow position:
               
chr18:11311596-11311357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 186
               

               
Conread position:
               
434-702
               

               
Cow position:
               
chr18:7056377-7056641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
434-760
               

               
Cow position:
               
chr18:23052901-23053229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
436-610
               

               
Cow position:
               
chr18:291163-290981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
437-766
               

               
Cow position:
               
chr18:27168962-27169295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
140, 237
               

               
Conread position:
               
438-763
               

               
Cow position:
               
chr18:10040400-10040071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
444-731
               

               
Cow position:
               
chr18:55139232-55138947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
218, 124
               

               
Conread position:
               
444-831
               

               
Cow position:
               
chr18:3166915-3166544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
170, 56
               

               
Conread position:
               
444-833
               

               
Cow position:
               
chr18:37509847-37510244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 368
               

               
Conread position:
               
444-848
               

               
Cow position:
               
chr18:47511559-47511969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
445-829
               

               
Cow position:
               
chr18:11618043-11618423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
126, 190
               

               
Conread position:
               
446-737
               

               
Cow position:
               
chr18:18639938-18640230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 97
               

               
Conread position:
               
446-742
               

               
Cow position:
               
chr18:8315995-8316298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
446-742
               

               
Cow position:
               
chr18:32755119-32755422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
446-742
               

               
Cow position:
               
chr18:43226387-43226085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 207
               

               
Conread position:
               
446-750
               

               
Cow position:
               
chr18:1023352-1023652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
298, 258
               

               
Conread position:
               
449-760
               

               
Cow position:
               
chr18:22237390-22237078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 243
               

               
Conread position:
               
452-602
               

               
Cow position:
               
chr18:52388352-52388199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
452-745
               

               
Cow position:
               
chr18:40892838-40893159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 311
               

               
Conread position:
               
455-576
               

               
Cow position:
               
chr18:30786373-30786252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
455-856
               

               
Cow position:
               
chr18:34621793-34621389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
458-753
               

               
Cow position:
               
chr18:9029200-9029497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
221, 89
               

               
Conread position:
               
458-768
               

               
Cow position:
               
chr18:19362704-19362398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 99
               

               
Conread position:
               
458-825
               

               
Cow position:
               
chr18:6881755-6881404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
286, 86
               

               
Conread position:
               
458-828
               

               
Cow position:
               
chr18:9010307-9010671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
460-808
               

               
Cow position:
               
chr18:20999036-20998689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
461-818
               

               
Cow position:
               
chr18:34527530-34527158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
117, 97
               

               
Conread position:
               
468-743
               

               
Cow position:
               
chr18:27078432-27078707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 197
               

               
Conread position:
               
472-658
               

               
Cow position:
               
chr18:35728989-35729179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
472-742
               

               
Cow position:
               
chr18:55022230-55021952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
475-825
               

               
Cow position:
               
chr18:36445021-36445384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 257
               

               
Conread position:
               
477-602
               

               
Cow position:
               
chr18:29335853-29335981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
477-661
               

               
Cow position:
               
chr18:23880423-23880612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
477-710
               

               
Cow position:
               
chr18:46321677-46321444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 146
               

               
Conread position:
               
477-716
               

               
Cow position:
               
chr18:24491479-24491242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 102
               

               
Conread position:
               
477-730
               

               
Cow position:
               
chr18:7322329-7322586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
477-735
               

               
Cow position:
               
chr18:26844053-26843796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 144
               

               
Conread position:
               
477-801
               

               
Cow position:
               
chr18:5646836-5647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
477-818
               

               
Cow position:
               
chr18:1584612-1584291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
477-828
               

               
Cow position:
               
chr18:51443835-51443481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 144
               

               
Conread position:
               
477-829
               

               
Cow position:
               
chr18:38606829-38607176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 187
               

               
Conread position:
               
477-830
               

               
Cow position:
               
chr18:45961666-45961315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 145
               

               
Conread position:
               
477-832
               

               
Cow position:
               
chr18:55697422-55697071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
477-850
               

               
Cow position:
               
chr18:13508133-13507771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 136
               

               
Conread position:
               
477-856
               

               
Cow position:
               
chr18:23062610-23062229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 194
               

               
Conread position:
               
478-621
               

               
Cow position:
               
chr18:4628325-4628179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
478-622
               

               
Cow position:
               
chr18:35337308-35337455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
478-622
               

               
Cow position:
               
chr18:42080058-42079917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
478-623
               

               
Cow position:
               
chr18:32123438-32123290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
478-627
               

               
Cow position:
               
chr18:47777701-47777855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
478-669
               

               
Cow position:
               
chr18:12270086-12270282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
478-736
               

               
Cow position:
               
chr18:17938310-17938571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
478-742
               

               
Cow position:
               
chr18:15911416-15911145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 176
               

               
Conread position:
               
478-760
               

               
Cow position:
               
chr18:35818405-35818121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 88
               

               
Conread position:
               
478-773
               

               
Cow position:
               
chr18:17380183-17380462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
247, 27
               

               
Conread position:
               
478-778
               

               
Cow position:
               
chr18:19123771-19124076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
478-779
               

               
Cow position:
               
chr18:33852449-33852754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
478-781
               

               
Cow position:
               
chr18:56362006-56361703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 258
               

               
Conread position:
               
478-787
               

               
Cow position:
               
chr18:46108785-46108472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
50, 207
               

               
Conread position:
               
478-789
               

               
Cow position:
               
chr18:34755330-34755015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
478-822
               

               
Cow position:
               
chr18:26937321-26937667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 196
               

               
Conread position:
               
478-825
               

               
Cow position:
               
chr18:28794471-28794123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
478-825
               

               
Cow position:
               
chr18:56431235-56430892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
478-834
               

               
Cow position:
               
chr18:3209317-3209671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
478-835
               

               
Cow position:
               
chr18:21682374-21682017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 136
               

               
Conread position:
               
478-850
               

               
Cow position:
               
chr18:21195745-21195376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 260
               

               
Conread position:
               
479-731
               

               
Cow position:
               
chr18:19761816-19762078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 178
               

               
Conread position:
               
480-699
               

               
Cow position:
               
chr18:21751899-21752121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
480-850
               

               
Cow position:
               
chr18:4796565-4796938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
97, 183
               

               
Conread position:
               
482-737
               

               
Cow position:
               
chr18:42850487-42850737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
484-737
               

               
Cow position:
               
chr18:34615880-34615629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
197, 81
               

               
Conread position:
               
484-827
               

               
Cow position:
               
chr18:26286514-26286858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
486-687
               

               
Cow position:
               
chr18:18820057-18819860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
487-737
               

               
Cow position:
               
chr18:50927338-50927591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 177
               

               
Conread position:
               
487-754
               

               
Cow position:
               
chr18:35535682-35535410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 62
               

               
Conread position:
               
487-761
               

               
Cow position:
               
chr18:33488599-33488328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
487-768
               

               
Cow position:
               
chr18:18091818-18091529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
487-768
               

               
Cow position:
               
chr18:36632307-36632019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
487-797
               

               
Cow position:
               
chr18:4624826-4624512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
487-826
               

               
Cow position:
               
chr18:23447475-23447134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
487-834
               

               
Cow position:
               
chr18:56464269-56463928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
488-603
               

               
Cow position:
               
chr18:17929218-17929336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
488-707
               

               
Cow position:
               
chr18:49782970-49782751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 179
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr18:18445017-18444762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr18:19531307-19531568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr18:24590735-24590992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr18:43393424-43393685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-768
               

               
Cow position:
               
chr18:32436517-32436228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
488-824
               

               
Cow position:
               
chr18:19977374-19977035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
488-830
               

               
Cow position:
               
chr18:16842462-16842114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 135
               

               
Conread position:
               
488-876
               

               
Cow position:
               
chr18:34814393-34814785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
489-738
               

               
Cow position:
               
chr18:10103218-10103473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
489-742
               

               
Cow position:
               
chr18:46581575-46581315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 165
               

               
Conread position:
               
489-759
               

               
Cow position:
               
chr18:35288999-35289269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 185
               

               
Conread position:
               
489-760
               

               
Cow position:
               
chr18:21810676-21810397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
492-739
               

               
Cow position:
               
chr18:52993878-52994126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
492-823
               

               
Cow position:
               
chr18:3027757-3027416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
493-622
               

               
Cow position:
               
chr18:19531069-19531201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
493-702
               

               
Cow position:
               
chr18:7969824-7970036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
493-713
               

               
Cow position:
               
chr18:4535375-4535155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
493-789
               

               
Cow position:
               
chr18:55505013-55505315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
162, 126
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr18:5486860-5487183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 188
               

               
Conread position:
               
493-816
               

               
Cow position:
               
chr18:11191032-11191367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
493-832
               

               
Cow position:
               
chr18:55702036-55701695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
493-833
               

               
Cow position:
               
chr18:29796824-29796469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 215
               

               
Conread position:
               
493-850
               

               
Cow position:
               
chr18:55462100-55461741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
83, 176
               

               
Conread position:
               
493-856
               

               
Cow position:
               
chr18:14586867-14586499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
494-825
               

               
Cow position:
               
chr18:39662387-39662724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 176
               

               
Conread position:
               
494-830
               

               
Cow position:
               
chr18:5570770-5571109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
495-702
               

               
Cow position:
               
chr18:1664087-1664294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-850
               

               
Cow position:
               
chr18:55396928-55397275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
222, 136
               

               
Conread position:
               
495-853
               

               
Cow position:
               
chr18:1663120-1662749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 328
               

               
Conread position:
               
498-702
               

               
Cow position:
               
chr18:26626353-26626153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
498-702
               

               
Cow position:
               
chr18:28036833-28037033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
498-724
               

               
Cow position:
               
chr18:45629510-45629283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
498-728
               

               
Cow position:
               
chr18:38670491-38670263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
498-735
               

               
Cow position:
               
chr18:39279391-39279139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
498-736
               

               
Cow position:
               
chr18:13212867-13213101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
498-757
               

               
Cow position:
               
chr18:4776082-4775831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
498-760
               

               
Cow position:
               
chr18:38075542-38075270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
498-760
               

               
Cow position:
               
chr18:41853306-41853039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
498-792
               

               
Cow position:
               
chr18:32244408-32244109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
498-815
               

               
Cow position:
               
chr18:7359356-7359681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 31
               

               
Conread position:
               
498-825
               

               
Cow position:
               
chr18:18340339-18340021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
500-814
               

               
Cow position:
               
chr18:29371483-29371803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 137
               

               
Conread position:
               
501-786
               

               
Cow position:
               
chr18:15881237-15880953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
504-623
               

               
Cow position:
               
chr18:52665339-52665217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
504-791
               

               
Cow position:
               
chr18:49665537-49665248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
504-831
               

               
Cow position:
               
chr18:11831763-11832076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
505-646
               

               
Cow position:
               
chr18:29248614-29248470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
505-751
               

               
Cow position:
               
chr18:11671431-11671683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
505-778
               

               
Cow position:
               
chr18:54646112-54646376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
239, 114
               

               
Conread position:
               
506-736
               

               
Cow position:
               
chr18:5742796-5742581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
506-824
               

               
Cow position:
               
chr18:16726271-16726595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
506-853
               

               
Cow position:
               
chr18:12776151-12775816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 183
               

               
Conread position:
               
507-757
               

               
Cow position:
               
chr18:56045796-56046054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
507-789
               

               
Cow position:
               
chr18:49200270-49200552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
507-805
               

               
Cow position:
               
chr18:9818463-9818765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 105
               

               
Conread position:
               
507-830
               

               
Cow position:
               
chr18:19273493-19273151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 229
               

               
Conread position:
               
508-745
               

               
Cow position:
               
chr18:35472313-35472071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
508-821
               

               
Cow position:
               
chr18:41270711-41271030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
508-824
               

               
Cow position:
               
chr18:19378060-19377735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
508-826
               

               
Cow position:
               
chr18:20174506-20174183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 194
               

               
Conread position:
               
508-848
               

               
Cow position:
               
chr18:6309718-6310046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
195, 61
               

               
Conread position:
               
509-737
               

               
Cow position:
               
chr18:2849636-2849401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
509-821
               

               
Cow position:
               
chr18:18562911-18562592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
510-759
               

               
Cow position:
               
chr18:19536285-19536539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
511-735
               

               
Cow position:
               
chr18:49660413-49660188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
67, 201
               

               
Conread position:
               
511-742
               

               
Cow position:
               
chr18:29264824-29264593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
512-789
               

               
Cow position:
               
chr18:40471968-40472253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
512-850
               

               
Cow position:
               
chr18:10575740-10576070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
512-850
               

               
Cow position:
               
chr18:45104819-45104476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
513-623
               

               
Cow position:
               
chr18:43504005-43503892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
514-721
               

               
Cow position:
               
chr18:31947270-31947056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
514-833
               

               
Cow position:
               
chr18:55757838-55757510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
515-732
               

               
Cow position:
               
chr18:17108201-17108417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
517-775
               

               
Cow position:
               
chr18:45395626-45395901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 204
               

               
Conread position:
               
519-677
               

               
Cow position:
               
chr18:53596727-53596884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
519-767
               

               
Cow position:
               
chr18:48407425-48407679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
519-804
               

               
Cow position:
               
chr18:2774952-2774675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
520-646
               

               
Cow position:
               
chr18:33896997-33896871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
520-737
               

               
Cow position:
               
chr18:48241578-48241788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
520-742
               

               
Cow position:
               
chr18:31054478-31054248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
520-742
               

               
Cow position:
               
chr18:31213828-31213599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
520-742
               

               
Cow position:
               
chr18:33856053-33855824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
520-829
               

               
Cow position:
               
chr18:35537574-35537285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
226, 56
               

               
Conread position:
               
521-677
               

               
Cow position:
               
chr18:18371227-18371073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
521-767
               

               
Cow position:
               
chr18:46881046-46880789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
522-622
               

               
Cow position:
               
chr18:22182121-22182018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
523-732
               

               
Cow position:
               
chr18:54974351-54974137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
523-789
               

               
Cow position:
               
chr18:51826930-51827197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
53, 169
               

               
Conread position:
               
523-821
               

               
Cow position:
               
chr18:4666569-4666270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 96
               

               
Conread position:
               
523-842
               

               
Cow position:
               
chr18:10954120-10954439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 36
               

               
Conread position:
               
524-730
               

               
Cow position:
               
chr18:9846793-9846587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 188
               

               
Conread position:
               
525-837
               

               
Cow position:
               
chr18:18627686-18627363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
526-687
               

               
Cow position:
               
chr18:51393597-51393441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
526-702
               

               
Cow position:
               
chr18:10116922-10117100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
526-759
               

               
Cow position:
               
chr18:46145444-46145685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 128
               

               
Conread position:
               
526-822
               

               
Cow position:
               
chr18:32121419-32121118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
527-681
               

               
Cow position:
               
chr18:5076162-5076003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
527-702
               

               
Cow position:
               
chr18:11212888-11213063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
528-750
               

               
Cow position:
               
chr18:39739933-39740146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
528-825
               

               
Cow position:
               
chr18:35797265-35797572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
529-701
               

               
Cow position:
               
chr18:23429428-23429602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
529-744
               

               
Cow position:
               
chr18:52590261-52590472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
532-768
               

               
Cow position:
               
chr18:2099703-2099465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
533-742
               

               
Cow position:
               
chr18:40329506-40329722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
533-742
               

               
Cow position:
               
chr18:40770210-40770426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
535-742
               

               
Cow position:
               
chr18:26343724-26343938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
535-750
               

               
Cow position:
               
chr18:4078459-4078675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
536-719
               

               
Cow position:
               
chr18:56191552-56191366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
536-769
               

               
Cow position:
               
chr18:11811629-11811864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
537-736
               

               
Cow position:
               
chr18:55046227-55046432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
537-825
               

               
Cow position:
               
chr18:13632298-13632007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
538-805
               

               
Cow position:
               
chr18:3150707-3150429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
538-821
               

               
Cow position:
               
chr18:24956950-24957245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
539-759
               

               
Cow position:
               
chr18:35612511-35612740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
539-835
               

               
Cow position:
               
chr18:1216995-1216702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
539-850
               

               
Cow position:
               
chr18:49100715-49100403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 149
               

               
Conread position:
               
539-866
               

               
Cow position:
               
chr18:4749226-4748902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 247
               

               
Conread position:
               
540-835
               

               
Cow position:
               
chr18:48513677-48513378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
541-773
               

               
Cow position:
               
chr18:56292252-56292490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
541-835
               

               
Cow position:
               
chr18:56172363-56172065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 224
               

               
Conread position:
               
543-848
               

               
Cow position:
               
chr18:4884855-4884554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
544-670
               

               
Cow position:
               
chr18:4833221-4833091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
547-732
               

               
Cow position:
               
chr18:44802220-44802037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
547-819
               

               
Cow position:
               
chr18:19619613-19619892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 192
               

               
Conread position:
               
547-849
               

               
Cow position:
               
chr18:8105280-8104978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
548-835
               

               
Cow position:
               
chr18:51298144-51298438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
548-850
               

               
Cow position:
               
chr18:56181791-56181496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
550-857
               

               
Cow position:
               
chr18:43065178-43065502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
164, 283
               

               
Conread position:
               
553-707
               

               
Cow position:
               
chr18:32017370-32017525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
554-831
               

               
Cow position:
               
chr18:11233101-11233384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 258
               

               
Conread position:
               
555-850
               

               
Cow position:
               
chr18:9365583-9365884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 267
               

               
Conread position:
               
556-684
               

               
Cow position:
               
chr18:36769256-36769123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
556-781
               

               
Cow position:
               
chr18:52644296-52644064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
556-807
               

               
Cow position:
               
chr18:29958474-29958231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
557-789
               

               
Cow position:
               
chr18:238671-238435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
559-835
               

               
Cow position:
               
chr18:55001061-55000786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
562-850
               

               
Cow position:
               
chr18:44549226-44548947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
170, 117
               

               
Conread position:
               
563-814
               

               
Cow position:
               
chr18:6275495-6275755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
14, 178
               

               
Conread position:
               
569-807
               

               
Cow position:
               
chr18:46048454-46048688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
569-814
               

               
Cow position:
               
chr18:10101181-10101426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
569-814
               

               
Cow position:
               
chr18:51272053-51271820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
569-850
               

               
Cow position:
               
chr18:5577991-5578274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
569-850
               

               
Cow position:
               
chr18:25647562-25647283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
569-851
               

               
Cow position:
               
chr18:12113679-12113405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
175, 81
               

               
Conread position:
               
569-856
               

               
Cow position:
               
chr18:48290750-48290468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
571-825
               

               
Cow position:
               
chr18:11166666-11166926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
571-857
               

               
Cow position:
               
chr18:30673950-30673669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
572-732
               

               
Cow position:
               
chr18:46135011-46135167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
572-753
               

               
Cow position:
               
chr18:24834904-24834718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
572-789
               

               
Cow position:
               
chr18:43823262-43823042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 191
               

               
Conread position:
               
572-823
               

               
Cow position:
               
chr18:26586974-26586714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 254
               

               
Conread position:
               
572-839
               

               
Cow position:
               
chr18:3133051-3132795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
573-824
               

               
Cow position:
               
chr18:50381949-50382201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
575-755
               

               
Cow position:
               
chr18:2439028-2438848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
575-825
               

               
Cow position:
               
chr18:4369090-4368832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
575-848
               

               
Cow position:
               
chr18:25206497-25206224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
578-767
               

               
Cow position:
               
chr18:46727290-46727486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
578-780
               

               
Cow position:
               
chr18:4625597-4625803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
578-809
               

               
Cow position:
               
chr18:28924135-28923907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
578-825
               

               
Cow position:
               
chr18:18958094-18957851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
212, 156
               

               
Conread position:
               
578-833
               

               
Cow position:
               
chr18:14127271-14127017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
579-850
               

               
Cow position:
               
chr18:32873282-32873556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
580-736
               

               
Cow position:
               
chr18:36265084-36264931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
580-831
               

               
Cow position:
               
chr18:50700364-50700622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
580-856
               

               
Cow position:
               
chr18:35827716-35827441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
581-762
               

               
Cow position:
               
chr18:5991198-5991383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
581-789
               

               
Cow position:
               
chr18:35552061-35551850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
581-808
               

               
Cow position:
               
chr18:3115160-3115393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
581-825
               

               
Cow position:
               
chr18:26998564-26998829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
582-732
               

               
Cow position:
               
chr18:44484057-44483904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
582-737
               

               
Cow position:
               
chr18:24977650-24977497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
582-768
               

               
Cow position:
               
chr18:3422421-3422607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
582-805
               

               
Cow position:
               
chr18:4649034-4648816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 95
               

               
Conread position:
               
582-821
               

               
Cow position:
               
chr18:11680421-11680668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
582-825
               

               
Cow position:
               
chr18:20127401-20127161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
582-825
               

               
Cow position:
               
chr18:42060777-42061018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 172
               

               
Conread position:
               
582-826
               

               
Cow position:
               
chr18:33157522-33157763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
162, 123
               

               
Conread position:
               
582-829
               

               
Cow position:
               
chr18:16258569-16258805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
214, 104
               

               
Conread position:
               
582-832
               

               
Cow position:
               
chr18:54572595-54572340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 87
               

               
Conread position:
               
582-853
               

               
Cow position:
               
chr18:20271319-20271051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 147
               

               
Conread position:
               
582-856
               

               
Cow position:
               
chr18:47868156-47868436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
101, 238
               

               
Conread position:
               
583-810
               

               
Cow position:
               
chr18:52637827-52637588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
584-732
               

               
Cow position:
               
chr18:51595337-51595186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
584-743
               

               
Cow position:
               
chr18:21067643-21067800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 117
               

               
Conread position:
               
584-780
               

               
Cow position:
               
chr18:15025382-15025573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 92
               

               
Conread position:
               
584-813
               

               
Cow position:
               
chr18:22214189-22214416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
584-814
               

               
Cow position:
               
chr18:13359765-13360000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
584-835
               

               
Cow position:
               
chr18:10904549-10904805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
584-839
               

               
Cow position:
               
chr18:4515730-4515990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
585-821
               

               
Cow position:
               
chr18:10516852-10517074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
206, 32
               

               
Conread position:
               
585-825
               

               
Cow position:
               
chr18:56159169-56159407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
159, 55
               

               
Conread position:
               
585-835
               

               
Cow position:
               
chr18:9557685-9557935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
585-856
               

               
Cow position:
               
chr18:1144489-1144212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
585-857
               

               
Cow position:
               
chr18:42455316-42455049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
203, 56
               

               
Conread position:
               
586-789
               

               
Cow position:
               
chr18:39115439-39115231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
586-814
               

               
Cow position:
               
chr18:6610153-6609922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
586-821
               

               
Cow position:
               
chr18:55789287-55789050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
586-835
               

               
Cow position:
               
chr18:56183643-56183898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 34
               

               
Conread position:
               
587-756
               

               
Cow position:
               
chr18:11694986-11695153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
588-789
               

               
Cow position:
               
chr18:4529227-4529418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
588-789
               

               
Cow position:
               
chr18:47931153-47930957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 88
               

               
Conread position:
               
588-850
               

               
Cow position:
               
chr18:39434547-39434792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
203, 52
               

               
Conread position:
               
589-780
               

               
Cow position:
               
chr18:47517500-47517310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr18:268103-267874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 77
               

               
Conread position:
               
589-857
               

               
Cow position:
               
chr18:5995180-5995442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
590-778
               

               
Cow position:
               
chr18:46453170-46452978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
590-866
               

               
Cow position:
               
chr18:31725175-31724895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
591-763
               

               
Cow position:
               
chr18:24047958-24048123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
591-810
               

               
Cow position:
               
chr18:31586654-31586436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
591-825
               

               
Cow position:
               
chr18:16847408-16847640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
591-827
               

               
Cow position:
               
chr18:54658011-54658258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
591-829
               

               
Cow position:
               
chr18:38985397-38985642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 227
               

               
Conread position:
               
591-832
               

               
Cow position:
               
chr18:42479870-42479635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
592-735
               

               
Cow position:
               
chr18:47779167-47779310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
592-768
               

               
Cow position:
               
chr18:56163298-56163474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 142
               

               
Conread position:
               
592-829
               

               
Cow position:
               
chr18:55498777-55499018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
592-831
               

               
Cow position:
               
chr18:38344515-38344755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
593-807
               

               
Cow position:
               
chr18:25282843-25282624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr18:43806163-43806392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
594-737
               

               
Cow position:
               
chr18:19831010-19831148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
594-847
               

               
Cow position:
               
chr18:21192697-21192450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
598-827
               

               
Cow position:
               
chr18:2592456-2592219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
599-737
               

               
Cow position:
               
chr18:5247801-5247663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
599-776
               

               
Cow position:
               
chr18:18976802-18976984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 173
               

               
Conread position:
               
599-821
               

               
Cow position:
               
chr18:2569518-2569735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
599-825
               

               
Cow position:
               
chr18:51656335-51656097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
602-770
               

               
Cow position:
               
chr18:12058738-12058902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
602-848
               

               
Cow position:
               
chr18:11691689-11691445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
607-791
               

               
Cow position:
               
chr18:5711942-5711757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
607-857
               

               
Cow position:
               
chr18:3044156-3044421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
610-814
               

               
Cow position:
               
chr18:48453422-48453624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
611-753
               

               
Cow position:
               
chr18:20797831-20797971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
613-756
               

               
Cow position:
               
chr18:52402786-52402641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
613-783
               

               
Cow position:
               
chr18:7952378-7952552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
613-849
               

               
Cow position:
               
chr18:19761430-19761665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
614-810
               

               
Cow position:
               
chr18:21768360-21768563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
618-826
               

               
Cow position:
               
chr18:12023896-12023689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
618-850
               

               
Cow position:
               
chr18:35582365-35582132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
619-807
               

               
Cow position:
               
chr18:7058967-7059150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
620-832
               

               
Cow position:
               
chr18:37382359-37382141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
70, 197
               

               
Conread position:
               
622-833
               

               
Cow position:
               
chr18:22411876-22411663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
622-842
               

               
Cow position:
               
chr18:56192849-56192628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
635-813
               

               
Cow position:
               
chr18:32883055-32883241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
635-824
               

               
Cow position:
               
chr18:21205120-21205308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 54
               

               
Conread position:
               
635-826
               

               
Cow position:
               
chr18:20482120-20481936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
638-849
               

               
Cow position:
               
chr18:33007813-33008027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
639-858
               

               
Cow position:
               
chr18:24946055-24945832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
642-814
               

               
Cow position:
               
chr18:28823208-28823031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
650-778
               

               
Cow position:
               
chr18:43020621-43020495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
650-847
               

               
Cow position:
               
chr18:219101-219302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 171
               

               
Conread position:
               
676-825
               

               
Cow position:
               
chr18:7108920-7109075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               
Show alignments to all cow chromosomes.