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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_016468.5.5
        

               
Conread position:
               
378-593
               

               
Cow position:
               
chr21:6102734-6102517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
378-602
               

               
Cow position:
               
chr21:16889922-16889697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
378-606
               

               
Cow position:
               
chr21:11083033-11082800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
378-669
               

               
Cow position:
               
chr21:9981096-9980817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
378-731
               

               
Cow position:
               
chr21:24698069-24698436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
378-773
               

               
Cow position:
               
chr21:39429540-39429943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
199, 18
               

               
Conread position:
               
378-824
               

               
Cow position:
               
chr21:28477217-28477668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
378-841
               

               
Cow position:
               
chr21:32297910-32297452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 18
               

               
Conread position:
               
379-575
               

               
Cow position:
               
chr21:1058392-1058594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
380-622
               

               
Cow position:
               
chr21:42917717-42917960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
381-600
               

               
Cow position:
               
chr21:21076721-21076942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
195, 166
               

               
Conread position:
               
389-749
               

               
Cow position:
               
chr21:5153218-5153581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
389-839
               

               
Cow position:
               
chr21:17414922-17414494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
391-737
               

               
Cow position:
               
chr21:37352807-37352471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
391-823
               

               
Cow position:
               
chr21:28617205-28617630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 196
               

               
Conread position:
               
392-623
               

               
Cow position:
               
chr21:19350928-19350694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
395-781
               

               
Cow position:
               
chr21:26835689-26835294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
395-838
               

               
Cow position:
               
chr21:37517758-37517309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 259
               

               
Conread position:
               
396-789
               

               
Cow position:
               
chr21:39700468-39700067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 258
               

               
Conread position:
               
396-821
               

               
Cow position:
               
chr21:38900392-38900815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
396-832
               

               
Cow position:
               
chr21:37706809-37706371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 138
               

               
Conread position:
               
397-551
               

               
Cow position:
               
chr21:24111020-24110865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
397-559
               

               
Cow position:
               
chr21:2293254-2293091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
397-561
               

               
Cow position:
               
chr21:29855283-29855447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr21:8686624-8686449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr21:23341590-23341766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr21:33107555-33107380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr21:31920-32097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr21:10045846-10046023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr21:13303139-13303316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr21:23283224-23283045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr21:28768827-28768649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-592
               

               
Cow position:
               
chr21:34835846-34835652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
397-598
               

               
Cow position:
               
chr21:27619581-27619377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-599
               

               
Cow position:
               
chr21:48531119-48531324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr21:44761747-44761539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-603
               

               
Cow position:
               
chr21:13257279-13257488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
397-605
               

               
Cow position:
               
chr21:3496567-3496357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
397-606
               

               
Cow position:
               
chr21:32560029-32559817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 152
               

               
Conread position:
               
397-608
               

               
Cow position:
               
chr21:471232-471458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
397-611
               

               
Cow position:
               
chr21:1752329-1752545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-617
               

               
Cow position:
               
chr21:42442998-42442775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
397-620
               

               
Cow position:
               
chr21:7666447-7666221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr21:6863064-6862843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr21:33415182-33414956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
179, 191
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:443641-443867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:10756850-10757078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:11353431-11353659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:25738268-25738040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:31948501-31948729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:31950352-31950580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr21:47978206-47978433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-623
               

               
Cow position:
               
chr21:3923851-3924080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-646
               

               
Cow position:
               
chr21:1765597-1765341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
397-669
               

               
Cow position:
               
chr21:45654-45929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
96, 226
               

               
Conread position:
               
397-670
               

               
Cow position:
               
chr21:2657204-2657473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
397-697
               

               
Cow position:
               
chr21:4035381-4035081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
397-712
               

               
Cow position:
               
chr21:5840782-5841098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
397-712
               

               
Cow position:
               
chr21:19702133-19702450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 310
               

               
Conread position:
               
397-712
               

               
Cow position:
               
chr21:33832039-33831724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
65, 204
               

               
Conread position:
               
397-718
               

               
Cow position:
               
chr21:2871107-2870786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-719
               

               
Cow position:
               
chr21:31512332-31512010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 208
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr21:32447151-32447492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 246
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr21:33709561-33709220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr21:39225009-39224668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-736
               

               
Cow position:
               
chr21:15742494-15742148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 279
               

               
Conread position:
               
397-736
               

               
Cow position:
               
chr21:18979246-18978896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 145
               

               
Conread position:
               
397-737
               

               
Cow position:
               
chr21:24297151-24296820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
397-737
               

               
Cow position:
               
chr21:36711802-36712150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 230
               

               
Conread position:
               
397-737
               

               
Cow position:
               
chr21:38917844-38918166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:2709951-2709599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:4473409-4473060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
175, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:7038254-7037902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:7525056-7525408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:7597332-7596973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
166, 264
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:16575508-16575156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:16794949-16795301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:17539343-17539695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:18574453-18574805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:20370304-20370656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:21103657-21104010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:21624023-21624375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:21909964-21910316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:22100261-22099909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:25598603-25598954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:26854754-26854402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:27036387-27036739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:29954829-29955181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:30134728-30135077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:30655578-30655930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:31039743-31039391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:33770616-33770968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:33901365-33901719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:34900614-34900966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:38848861-38848509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:40479200-40479552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:41795785-41795433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr21:47140084-47139734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-743
               

               
Cow position:
               
chr21:20549313-20548954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
397-746
               

               
Cow position:
               
chr21:13735223-13734863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-751
               

               
Cow position:
               
chr21:11292645-11293008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
397-754
               

               
Cow position:
               
chr21:7047248-7046879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr21:48082-48452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
125, 259
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr21:5641899-5641531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:2472838-2472469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 257
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:11143911-11143544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:17411898-17411534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:19614183-19614553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:19626771-19626399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:26756784-26756418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:34181604-34181968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr21:39486335-39485967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
176, 117
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr21:750347-750716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr21:5857527-5857158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr21:9209245-9209609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr21:13111188-13110818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr21:36505627-36505258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr21:47429279-47429648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr21:3782709-3783080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr21:21785478-21785107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 310
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr21:27287914-27288284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 258
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr21:44281224-44280849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 227
               

               
Conread position:
               
397-761
               

               
Cow position:
               
chr21:4732608-4732239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 229
               

               
Conread position:
               
397-763
               

               
Cow position:
               
chr21:3818720-3819088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
397-763
               

               
Cow position:
               
chr21:34254670-34254301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 86
               

               
Conread position:
               
397-763
               

               
Cow position:
               
chr21:38691803-38692164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
397-766
               

               
Cow position:
               
chr21:13764588-13764951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:451813-452192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:1179327-1178949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:2938638-2939017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:13632499-13632877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:15545753-15545386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
175, 96
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:27147615-27147234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:29423997-29424369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:30571141-30570762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:34074576-34074955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 257
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:34251924-34251553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 225
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:34909801-34910179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:36225357-36225735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:36781064-36781438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr21:45842064-45841683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
175, 260
               

               
Conread position:
               
397-773
               

               
Cow position:
               
chr21:1483115-1483481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
285, 78
               

               
Conread position:
               
397-778
               

               
Cow position:
               
chr21:26875530-26875922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr21:27341976-27341604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr21:44122664-44123055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr21:33933775-33933383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
397-782
               

               
Cow position:
               
chr21:5649515-5649905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 238
               

               
Conread position:
               
397-783
               

               
Cow position:
               
chr21:13163533-13163889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
318, 25
               

               
Conread position:
               
397-786
               

               
Cow position:
               
chr21:7717178-7716783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 103
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:363262-363654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 260
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:1196476-1196876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:4079963-4080363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 234
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:4189449-4189840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 67
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:10854195-10854597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 259
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:21216532-21216139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 340
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:26744348-26743932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
180, 240
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr21:34301514-34301924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
397-790
               

               
Cow position:
               
chr21:2514783-2515176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-801
               

               
Cow position:
               
chr21:28512150-28512548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 169
               

               
Conread position:
               
397-802
               

               
Cow position:
               
chr21:34658647-34659054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 35
               

               
Conread position:
               
397-804
               

               
Cow position:
               
chr21:23293545-23293144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 99
               

               
Conread position:
               
397-807
               

               
Cow position:
               
chr21:6623758-6624183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 56
               

               
Conread position:
               
397-808
               

               
Cow position:
               
chr21:46912152-46912566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
397-810
               

               
Cow position:
               
chr21:32535594-32536003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
397-813
               

               
Cow position:
               
chr21:28923751-28924141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
397-814
               

               
Cow position:
               
chr21:48484831-48484415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 223
               

               
Conread position:
               
397-818
               

               
Cow position:
               
chr21:4998876-4998450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 225
               

               
Conread position:
               
397-821
               

               
Cow position:
               
chr21:4282255-4281834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 193
               

               
Conread position:
               
397-821
               

               
Cow position:
               
chr21:5455381-5454950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 232
               

               
Conread position:
               
397-822
               

               
Cow position:
               
chr21:1463842-1464272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
397-822
               

               
Cow position:
               
chr21:26628706-26629141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-823
               

               
Cow position:
               
chr21:23672361-23672791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
397-824
               

               
Cow position:
               
chr21:39401203-39401635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr21:34391357-34390933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 146
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr21:46973526-46973090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
397-827
               

               
Cow position:
               
chr21:10071320-10070887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 234
               

               
Conread position:
               
397-827
               

               
Cow position:
               
chr21:30849328-30848903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 39
               

               
Conread position:
               
397-832
               

               
Cow position:
               
chr21:3236138-3236570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr21:150085-150523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 409
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr21:2877903-2877459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 230
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr21:17144757-17145199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr21:42558713-42559144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr21:2366950-2367383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr21:40013753-40013325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
180, 229
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr21:47649280-47649723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 81
               

               
Conread position:
               
397-846
               

               
Cow position:
               
chr21:44514876-44515322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:642955-643386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 50
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:10263649-10264095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:10514421-10514868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 180
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:21480570-21480122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 223
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:24222930-24222475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:25382607-25383086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 270
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr21:27863911-27863451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 226
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr21:2420114-2420567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 199
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr21:18289273-18289731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 60
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr21:48638134-48637688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
397-857
               

               
Cow position:
               
chr21:22855831-22856290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 96
               

               
Conread position:
               
397-866
               

               
Cow position:
               
chr21:10075325-10074853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
398-616
               

               
Cow position:
               
chr21:29999971-29999750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
398-623
               

               
Cow position:
               
chr21:168036-167807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
398-664
               

               
Cow position:
               
chr21:27712826-27712553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
398-669
               

               
Cow position:
               
chr21:4559134-4558859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
398-712
               

               
Cow position:
               
chr21:22856790-22857103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
398-737
               

               
Cow position:
               
chr21:25475743-25476082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
398-781
               

               
Cow position:
               
chr21:25344486-25344868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 227
               

               
Conread position:
               
398-781
               

               
Cow position:
               
chr21:28442345-28442742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
398-791
               

               
Cow position:
               
chr21:13070254-13069852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
398-839
               

               
Cow position:
               
chr21:17412683-17412240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 285
               

               
Conread position:
               
398-850
               

               
Cow position:
               
chr21:725279-724822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
398-850
               

               
Cow position:
               
chr21:13897802-13898250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 222
               

               
Conread position:
               
399-574
               

               
Cow position:
               
chr21:3765826-3765654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
399-602
               

               
Cow position:
               
chr21:31276332-31276538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
399-783
               

               
Cow position:
               
chr21:47767772-47767382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
178, 255
               

               
Conread position:
               
399-856
               

               
Cow position:
               
chr21:22719163-22718715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 50
               

               
Conread position:
               
400-699
               

               
Cow position:
               
chr21:36909432-36909741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 151
               

               
Conread position:
               
400-759
               

               
Cow position:
               
chr21:1780965-1781330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 134
               

               
Conread position:
               
400-760
               

               
Cow position:
               
chr21:23900195-23899827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
400-826
               

               
Cow position:
               
chr21:17434708-17434275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
158, 323
               

               
Conread position:
               
400-833
               

               
Cow position:
               
chr21:28914751-28914314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 226
               

               
Conread position:
               
400-838
               

               
Cow position:
               
chr21:17417143-17416705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
400-857
               

               
Cow position:
               
chr21:33729046-33729499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 78
               

               
Conread position:
               
401-766
               

               
Cow position:
               
chr21:937665-938015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 218
               

               
Conread position:
               
401-768
               

               
Cow position:
               
chr21:17433641-17433269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 177
               

               
Conread position:
               
401-789
               

               
Cow position:
               
chr21:8981511-8981121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
175, 196
               

               
Conread position:
               
402-759
               

               
Cow position:
               
chr21:37924126-37924496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
402-793
               

               
Cow position:
               
chr21:3467884-3468282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
403-655
               

               
Cow position:
               
chr21:11676651-11676382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 190
               

               
Conread position:
               
403-676
               

               
Cow position:
               
chr21:23971222-23970944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 225
               

               
Conread position:
               
403-713
               

               
Cow position:
               
chr21:47823657-47823343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 185
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr21:31576123-31576474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 235
               

               
Conread position:
               
403-825
               

               
Cow position:
               
chr21:37299081-37299502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
403-835
               

               
Cow position:
               
chr21:23192904-23192461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
403-857
               

               
Cow position:
               
chr21:24607011-24607455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
404-560
               

               
Cow position:
               
chr21:28026741-28026898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
404-564
               

               
Cow position:
               
chr21:23603759-23603919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
404-574
               

               
Cow position:
               
chr21:25799980-25800155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:2261065-2260885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:2810497-2810327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:2927617-2927446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:4541257-4541082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:10000673-10000502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:18818716-18818543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr21:40128398-40128227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-588
               

               
Cow position:
               
chr21:8451461-8451647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
404-588
               

               
Cow position:
               
chr21:25473118-25473302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
404-592
               

               
Cow position:
               
chr21:3047280-3047467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
182, 173
               

               
Conread position:
               
404-592
               

               
Cow position:
               
chr21:31661673-31661868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
404-597
               

               
Cow position:
               
chr21:297339-297531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
404-600
               

               
Cow position:
               
chr21:9218551-9218741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
152, 51
               

               
Conread position:
               
404-600
               

               
Cow position:
               
chr21:27146589-27146388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
404-602
               

               
Cow position:
               
chr21:19050874-19050670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
404-602
               

               
Cow position:
               
chr21:31040823-31040620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
404-602
               

               
Cow position:
               
chr21:35573268-35573070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
404-605
               

               
Cow position:
               
chr21:22464405-22464610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
404-618
               

               
Cow position:
               
chr21:16278327-16278544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
404-621
               

               
Cow position:
               
chr21:2847422-2847194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
404-622
               

               
Cow position:
               
chr21:33245544-33245324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
404-623
               

               
Cow position:
               
chr21:36115950-36116168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
404-627
               

               
Cow position:
               
chr21:19237334-19237558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
169, 206
               

               
Conread position:
               
404-627
               

               
Cow position:
               
chr21:29839781-29840005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
404-627
               

               
Cow position:
               
chr21:31252943-31253166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
172, 200
               

               
Conread position:
               
404-631
               

               
Cow position:
               
chr21:14727672-14727893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
172, 83
               

               
Conread position:
               
404-659
               

               
Cow position:
               
chr21:44657934-44658191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
172, 222
               

               
Conread position:
               
404-677
               

               
Cow position:
               
chr21:19882299-19882015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
404-677
               

               
Cow position:
               
chr21:23658156-23658436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
404-684
               

               
Cow position:
               
chr21:26990-27276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
404-684
               

               
Cow position:
               
chr21:9863009-9862726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
68, 193
               

               
Conread position:
               
404-688
               

               
Cow position:
               
chr21:16230721-16231004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr21:25042105-25042406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr21:25297427-25297726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr21:30250589-30250292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
172, 134
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr21:34684968-34685267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr21:36399342-36399635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
404-707
               

               
Cow position:
               
chr21:17208111-17208410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
269, 134
               

               
Conread position:
               
404-708
               

               
Cow position:
               
chr21:42681358-42681045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 179
               

               
Conread position:
               
404-712
               

               
Cow position:
               
chr21:12100896-12101210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 186
               

               
Conread position:
               
404-719
               

               
Cow position:
               
chr21:12338782-12339105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
404-722
               

               
Cow position:
               
chr21:25158509-25158831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
404-722
               

               
Cow position:
               
chr21:34591579-34591243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
404-725
               

               
Cow position:
               
chr21:9201803-9202130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
404-730
               

               
Cow position:
               
chr21:11195749-11196081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr21:30904985-30904657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 194
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr21:3173732-3174059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr21:30897035-30897365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 99
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr21:31975088-31975428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
404-735
               

               
Cow position:
               
chr21:46462807-46463144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr21:22140726-22140388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
58, 223
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr21:25603571-25603233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 186
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr21:48291416-48291090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr21:13300769-13301103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 43
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr21:29253272-29252935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr21:32814200-32813868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr21:44331675-44331333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
404-738
               

               
Cow position:
               
chr21:14762898-14762550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
404-738
               

               
Cow position:
               
chr21:46132380-46132025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
404-741
               

               
Cow position:
               
chr21:34899738-34899394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr21:23329396-23329051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr21:45263404-45263062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 57
               

               
Conread position:
               
404-743
               

               
Cow position:
               
chr21:26681322-26680988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
274, 172
               

               
Conread position:
               
404-745
               

               
Cow position:
               
chr21:44219845-44220181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
404-753
               

               
Cow position:
               
chr21:4279251-4279601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 19
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr21:11509882-11510245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
168, 250
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr21:33993450-33993086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr21:29500523-29500886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr21:32191796-32192150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 53
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr21:48459252-48458888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
404-761
               

               
Cow position:
               
chr21:30566648-30566998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
176, 51
               

               
Conread position:
               
404-767
               

               
Cow position:
               
chr21:10571216-10571586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 274
               

               
Conread position:
               
404-767
               

               
Cow position:
               
chr21:21170328-21169959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
404-769
               

               
Cow position:
               
chr21:18932110-18932472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
404-772
               

               
Cow position:
               
chr21:612151-611781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
404-773
               

               
Cow position:
               
chr21:5595280-5595649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 229
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr21:5566596-5566993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr21:28599387-28599769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
404-780
               

               
Cow position:
               
chr21:10436786-10437169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
404-780
               

               
Cow position:
               
chr21:19957847-19958221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
274, 39
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr21:19698942-19698563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr21:27607747-27607362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
404-783
               

               
Cow position:
               
chr21:35898005-35897635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 196
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr21:12366003-12366386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 333
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr21:23683158-23683552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 296
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr21:30965996-30965604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 224
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr21:33420100-33419719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
404-791
               

               
Cow position:
               
chr21:48262746-48263129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
404-792
               

               
Cow position:
               
chr21:38867950-38867565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
404-803
               

               
Cow position:
               
chr21:4276986-4276575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
404-807
               

               
Cow position:
               
chr21:26829619-26829233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 171
               

               
Conread position:
               
404-813
               

               
Cow position:
               
chr21:18494596-18495000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 68
               

               
Conread position:
               
404-814
               

               
Cow position:
               
chr21:21967100-21967503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
172, 74
               

               
Conread position:
               
404-814
               

               
Cow position:
               
chr21:23606291-23606707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 17
               

               
Conread position:
               
404-818
               

               
Cow position:
               
chr21:33209815-33210239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 336
               

               
Conread position:
               
404-821
               

               
Cow position:
               
chr21:4905352-4904927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 207
               

               
Conread position:
               
404-821
               

               
Cow position:
               
chr21:14760194-14760611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
404-823
               

               
Cow position:
               
chr21:20925889-20925465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 135
               

               
Conread position:
               
404-824
               

               
Cow position:
               
chr21:40244050-40244482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 338
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr21:3813851-3813441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 173
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr21:15584787-15584377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 163
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr21:17713929-17714360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 145
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr21:27743357-27743791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 250
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr21:28881765-28882179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 173
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr21:43240480-43240907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
404-826
               

               
Cow position:
               
chr21:912345-911923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 128
               

               
Conread position:
               
404-826
               

               
Cow position:
               
chr21:36756224-36756641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
404-827
               

               
Cow position:
               
chr21:28989228-28989653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
404-827
               

               
Cow position:
               
chr21:29214539-29214114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 294
               

               
Conread position:
               
404-827
               

               
Cow position:
               
chr21:42914128-42913700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 88
               

               
Conread position:
               
404-829
               

               
Cow position:
               
chr21:20262718-20262286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
404-829
               

               
Cow position:
               
chr21:41957567-41957129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 284
               

               
Conread position:
               
404-831
               

               
Cow position:
               
chr21:393638-394068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
404-831
               

               
Cow position:
               
chr21:17482375-17482788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
172, 218
               

               
Conread position:
               
404-831
               

               
Cow position:
               
chr21:37942074-37941638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 193
               

               
Conread position:
               
404-835
               

               
Cow position:
               
chr21:28210802-28211247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 47
               

               
Conread position:
               
404-837
               

               
Cow position:
               
chr21:12616759-12617188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 38
               

               
Conread position:
               
404-838
               

               
Cow position:
               
chr21:29942612-29943058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
404-839
               

               
Cow position:
               
chr21:17479001-17479429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
404-839
               

               
Cow position:
               
chr21:20107134-20106701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr21:2904847-2904417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 279
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr21:7672738-7673185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 229
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr21:25764251-25764698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr21:27230175-27229729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 36
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr21:33263467-33263906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 189
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr21:33997609-33997165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr21:42540605-42540160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
404-853
               

               
Cow position:
               
chr21:5238022-5238452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 177
               

               
Conread position:
               
404-856
               

               
Cow position:
               
chr21:4585731-4585291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 10
               

               
Conread position:
               
404-856
               

               
Cow position:
               
chr21:16695986-16696435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
404-856
               

               
Cow position:
               
chr21:19766471-19766922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 5
               

               
Conread position:
               
404-856
               

               
Cow position:
               
chr21:42500652-42501112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 107
               

               
Conread position:
               
404-857
               

               
Cow position:
               
chr21:6765085-6764631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 47
               

               
Conread position:
               
404-857
               

               
Cow position:
               
chr21:7564706-7564238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 231
               

               
Conread position:
               
404-857
               

               
Cow position:
               
chr21:45866555-45867003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 89
               

               
Conread position:
               
405-602
               

               
Cow position:
               
chr21:18601279-18601477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
405-692
               

               
Cow position:
               
chr21:8274568-8274281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 176
               

               
Conread position:
               
405-702
               

               
Cow position:
               
chr21:20588648-20588948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
405-736
               

               
Cow position:
               
chr21:8290026-8289686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
405-742
               

               
Cow position:
               
chr21:36892285-36891943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
405-756
               

               
Cow position:
               
chr21:26399838-26399479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
405-826
               

               
Cow position:
               
chr21:2495554-2495131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 279
               

               
Conread position:
               
405-827
               

               
Cow position:
               
chr21:44108638-44109046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 83
               

               
Conread position:
               
405-830
               

               
Cow position:
               
chr21:5021085-5021516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 223
               

               
Conread position:
               
405-850
               

               
Cow position:
               
chr21:9711098-9710644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
406-573
               

               
Cow position:
               
chr21:13159151-13159315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
406-591
               

               
Cow position:
               
chr21:45355055-45355247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
406-617
               

               
Cow position:
               
chr21:39672292-39672506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
406-622
               

               
Cow position:
               
chr21:39674957-39675177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
406-740
               

               
Cow position:
               
chr21:684106-684432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 67
               

               
Conread position:
               
406-742
               

               
Cow position:
               
chr21:17452397-17452059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
406-766
               

               
Cow position:
               
chr21:24130704-24131061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 127
               

               
Conread position:
               
406-806
               

               
Cow position:
               
chr21:18935390-18935783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
406-831
               

               
Cow position:
               
chr21:4098507-4098919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
327, 37
               

               
Conread position:
               
407-576
               

               
Cow position:
               
chr21:28910083-28909915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
407-592
               

               
Cow position:
               
chr21:44861642-44861448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
407-736
               

               
Cow position:
               
chr21:37297694-37297372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
407-830
               

               
Cow position:
               
chr21:42464228-42463786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 383
               

               
Conread position:
               
408-575
               

               
Cow position:
               
chr21:12802163-12801993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
408-602
               

               
Cow position:
               
chr21:26557438-26557241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
408-643
               

               
Cow position:
               
chr21:6697472-6697234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
408-712
               

               
Cow position:
               
chr21:12313921-12314235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 268
               

               
Conread position:
               
408-721
               

               
Cow position:
               
chr21:12465970-12466291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 280
               

               
Conread position:
               
408-728
               

               
Cow position:
               
chr21:4860542-4860219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 174
               

               
Conread position:
               
408-728
               

               
Cow position:
               
chr21:29908133-29907809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
408-731
               

               
Cow position:
               
chr21:12507026-12507357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
408-731
               

               
Cow position:
               
chr21:39434045-39434377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 177
               

               
Conread position:
               
408-732
               

               
Cow position:
               
chr21:1803134-1802803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
167, 311
               

               
Conread position:
               
408-736
               

               
Cow position:
               
chr21:8420290-8420602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
408-737
               

               
Cow position:
               
chr21:24864769-24865113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
408-742
               

               
Cow position:
               
chr21:24085960-24085614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 228
               

               
Conread position:
               
408-767
               

               
Cow position:
               
chr21:3920592-3920228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
408-785
               

               
Cow position:
               
chr21:19974370-19974748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
170, 80
               

               
Conread position:
               
408-815
               

               
Cow position:
               
chr21:13704065-13703652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 74
               

               
Conread position:
               
408-826
               

               
Cow position:
               
chr21:23801491-23801084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
408-858
               

               
Cow position:
               
chr21:44826245-44825817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 111
               

               
Conread position:
               
409-669
               

               
Cow position:
               
chr21:33579813-33580071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
409-736
               

               
Cow position:
               
chr21:9363423-9363116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
409-789
               

               
Cow position:
               
chr21:36163341-36162956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 73
               

               
Conread position:
               
409-806
               

               
Cow position:
               
chr21:17174767-17175172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 190
               

               
Conread position:
               
409-806
               

               
Cow position:
               
chr21:45971529-45971147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
409-824
               

               
Cow position:
               
chr21:28810634-28810221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 191
               

               
Conread position:
               
409-827
               

               
Cow position:
               
chr21:43937-44348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
409-850
               

               
Cow position:
               
chr21:16612250-16612687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 280
               

               
Conread position:
               
409-853
               

               
Cow position:
               
chr21:24796413-24795969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 152
               

               
Conread position:
               
410-677
               

               
Cow position:
               
chr21:14797747-14797479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
410-677
               

               
Cow position:
               
chr21:36680327-36680599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
410-732
               

               
Cow position:
               
chr21:48108231-48107916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
204, 107
               

               
Conread position:
               
410-735
               

               
Cow position:
               
chr21:26852871-26853211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
410-813
               

               
Cow position:
               
chr21:15976263-15976664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 213
               

               
Conread position:
               
410-822
               

               
Cow position:
               
chr21:5596776-5597191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
410-850
               

               
Cow position:
               
chr21:33983188-33982745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 342
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr21:29704586-29704320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 168
               

               
Conread position:
               
411-758
               

               
Cow position:
               
chr21:4898027-4897675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
411-866
               

               
Cow position:
               
chr21:25480212-25480675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr21:21000432-21000263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
412-735
               

               
Cow position:
               
chr21:1990924-1991252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
412-742
               

               
Cow position:
               
chr21:9743955-9743618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
412-750
               

               
Cow position:
               
chr21:37874142-37874488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
412-760
               

               
Cow position:
               
chr21:7815094-7814730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
412-760
               

               
Cow position:
               
chr21:27376074-27376428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
412-760
               

               
Cow position:
               
chr21:30595127-30594767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 127
               

               
Conread position:
               
412-807
               

               
Cow position:
               
chr21:23984658-23984256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 9
               

               
Conread position:
               
412-810
               

               
Cow position:
               
chr21:34738223-34738638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 71
               

               
Conread position:
               
413-820
               

               
Cow position:
               
chr21:16789346-16789761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 371
               

               
Conread position:
               
413-825
               

               
Cow position:
               
chr21:8126161-8125762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
269, 117
               

               
Conread position:
               
413-831
               

               
Cow position:
               
chr21:18934551-18934970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
415-612
               

               
Cow position:
               
chr21:14125689-14125890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
415-663
               

               
Cow position:
               
chr21:3635103-3634847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
415-744
               

               
Cow position:
               
chr21:17262485-17262158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 130
               

               
Conread position:
               
415-793
               

               
Cow position:
               
chr21:13395178-13395560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 212
               

               
Conread position:
               
415-846
               

               
Cow position:
               
chr21:4794848-4795284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 328
               

               
Conread position:
               
417-760
               

               
Cow position:
               
chr21:24136547-24136897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 188
               

               
Conread position:
               
417-781
               

               
Cow position:
               
chr21:40267199-40266834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 283
               

               
Conread position:
               
419-617
               

               
Cow position:
               
chr21:10642232-10642429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
420-702
               

               
Cow position:
               
chr21:220592-220884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
420-789
               

               
Cow position:
               
chr21:45151999-45151615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
421-751
               

               
Cow position:
               
chr21:46777340-46777006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 243
               

               
Conread position:
               
421-835
               

               
Cow position:
               
chr21:4399433-4399856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
423-622
               

               
Cow position:
               
chr21:21963113-21963315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
423-751
               

               
Cow position:
               
chr21:30688554-30688223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
423-757
               

               
Cow position:
               
chr21:38651286-38650949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
423-759
               

               
Cow position:
               
chr21:30626547-30626205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
423-762
               

               
Cow position:
               
chr21:19668754-19668423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
423-781
               

               
Cow position:
               
chr21:4569863-4569495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 212
               

               
Conread position:
               
423-789
               

               
Cow position:
               
chr21:81705-82083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 323
               

               
Conread position:
               
423-806
               

               
Cow position:
               
chr21:45474120-45473730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 0
               

               
Conread position:
               
423-814
               

               
Cow position:
               
chr21:44671388-44671783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 318
               

               
Conread position:
               
423-821
               

               
Cow position:
               
chr21:45916069-45915673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 212
               

               
Conread position:
               
423-827
               

               
Cow position:
               
chr21:32574359-32574764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 247
               

               
Conread position:
               
423-850
               

               
Cow position:
               
chr21:19363815-19363397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 154
               

               
Conread position:
               
424-768
               

               
Cow position:
               
chr21:31158891-31159246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 117
               

               
Conread position:
               
424-779
               

               
Cow position:
               
chr21:21964667-21965014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
156, 69
               

               
Conread position:
               
424-848
               

               
Cow position:
               
chr21:29069690-29069267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
424-850
               

               
Cow position:
               
chr21:10151444-10151867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
424-850
               

               
Cow position:
               
chr21:44566062-44565655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
424-856
               

               
Cow position:
               
chr21:16909691-16910129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 208
               

               
Conread position:
               
425-598
               

               
Cow position:
               
chr21:33154961-33155137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-609
               

               
Cow position:
               
chr21:14238191-14238378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
425-622
               

               
Cow position:
               
chr21:11024353-11024153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-700
               

               
Cow position:
               
chr21:27500432-27500710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-736
               

               
Cow position:
               
chr21:36973177-36972860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr21:5790862-5791186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr21:24236750-24237073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-789
               

               
Cow position:
               
chr21:17475457-17475825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
425-791
               

               
Cow position:
               
chr21:13728120-13727756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
425-809
               

               
Cow position:
               
chr21:28259634-28260024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
152, 229
               

               
Conread position:
               
425-822
               

               
Cow position:
               
chr21:12153770-12154173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 342
               

               
Conread position:
               
425-825
               

               
Cow position:
               
chr21:9415880-9416292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 114
               

               
Conread position:
               
425-825
               

               
Cow position:
               
chr21:23821808-23822210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 7
               

               
Conread position:
               
425-833
               

               
Cow position:
               
chr21:25193432-25193844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 215
               

               
Conread position:
               
425-848
               

               
Cow position:
               
chr21:37479596-37480015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 360
               

               
Conread position:
               
426-827
               

               
Cow position:
               
chr21:23586501-23586925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 113
               

               
Conread position:
               
426-835
               

               
Cow position:
               
chr21:30990628-30990226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
427-768
               

               
Cow position:
               
chr21:33235437-33235786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
147, 227
               

               
Conread position:
               
427-830
               

               
Cow position:
               
chr21:17370244-17369836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
428-651
               

               
Cow position:
               
chr21:32190809-32191039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
432-625
               

               
Cow position:
               
chr21:2984147-2983950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
432-735
               

               
Cow position:
               
chr21:44804622-44804309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
432-760
               

               
Cow position:
               
chr21:41032925-41033255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
110, 192
               

               
Conread position:
               
432-821
               

               
Cow position:
               
chr21:28429093-28429482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
432-824
               

               
Cow position:
               
chr21:42190514-42190133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 101
               

               
Conread position:
               
433-742
               

               
Cow position:
               
chr21:4665839-4665525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
433-742
               

               
Cow position:
               
chr21:26071507-26071191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
433-752
               

               
Cow position:
               
chr21:20162180-20162505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 218
               

               
Conread position:
               
433-825
               

               
Cow position:
               
chr21:30232054-30231652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 40
               

               
Conread position:
               
433-851
               

               
Cow position:
               
chr21:3253817-3254215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
433-857
               

               
Cow position:
               
chr21:5344313-5344735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 23
               

               
Conread position:
               
435-735
               

               
Cow position:
               
chr21:36657222-36657520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
436-732
               

               
Cow position:
               
chr21:28029046-28029348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
437-756
               

               
Cow position:
               
chr21:22349792-22350120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 106
               

               
Conread position:
               
438-742
               

               
Cow position:
               
chr21:3364440-3364750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
438-825
               

               
Cow position:
               
chr21:5137857-5137444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
102, 401
               

               
Conread position:
               
439-735
               

               
Cow position:
               
chr21:23449227-23449525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
442-891
               

               
Cow position:
               
chr21:641241-641689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
443-608
               

               
Cow position:
               
chr21:41281249-41281080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
445-774
               

               
Cow position:
               
chr21:22310550-22310889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 94
               

               
Conread position:
               
446-731
               

               
Cow position:
               
chr21:26633005-26632714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
446-742
               

               
Cow position:
               
chr21:34955858-34956156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
446-857
               

               
Cow position:
               
chr21:17616658-17616252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 130
               

               
Conread position:
               
449-789
               

               
Cow position:
               
chr21:43402329-43401985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
176, 119
               

               
Conread position:
               
451-857
               

               
Cow position:
               
chr21:13048533-13048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 117
               

               
Conread position:
               
452-742
               

               
Cow position:
               
chr21:45250615-45250331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 167
               

               
Conread position:
               
452-760
               

               
Cow position:
               
chr21:39061512-39061828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
71, 256
               

               
Conread position:
               
452-859
               

               
Cow position:
               
chr21:42905706-42905300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
455-747
               

               
Cow position:
               
chr21:35899478-35899772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
455-850
               

               
Cow position:
               
chr21:31691148-31691547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 127
               

               
Conread position:
               
455-856
               

               
Cow position:
               
chr21:19196501-19196096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
456-850
               

               
Cow position:
               
chr21:5392870-5392474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
457-760
               

               
Cow position:
               
chr21:35823220-35822916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
458-835
               

               
Cow position:
               
chr21:24857981-24858366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 283
               

               
Conread position:
               
458-853
               

               
Cow position:
               
chr21:20045098-20044699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
459-853
               

               
Cow position:
               
chr21:39664698-39664333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
460-789
               

               
Cow position:
               
chr21:1815286-1814957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
460-789
               

               
Cow position:
               
chr21:13954184-13954522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
460-821
               

               
Cow position:
               
chr21:395552-395909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
460-835
               

               
Cow position:
               
chr21:38120775-38121153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 246
               

               
Conread position:
               
461-736
               

               
Cow position:
               
chr21:12973576-12973302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
461-768
               

               
Cow position:
               
chr21:703494-703176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
468-810
               

               
Cow position:
               
chr21:42170310-42170664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
469-602
               

               
Cow position:
               
chr21:14742931-14743067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
469-660
               

               
Cow position:
               
chr21:18155694-18155888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
469-735
               

               
Cow position:
               
chr21:47760458-47760729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 155
               

               
Conread position:
               
469-829
               

               
Cow position:
               
chr21:11645304-11644920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 254
               

               
Conread position:
               
469-848
               

               
Cow position:
               
chr21:46263858-46264232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 175
               

               
Conread position:
               
472-742
               

               
Cow position:
               
chr21:661924-661646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
472-742
               

               
Cow position:
               
chr21:35068045-35068323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
473-602
               

               
Cow position:
               
chr21:34586729-34586596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
473-832
               

               
Cow position:
               
chr21:42414414-42414054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 146
               

               
Conread position:
               
476-702
               

               
Cow position:
               
chr21:12440643-12440873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
477-659
               

               
Cow position:
               
chr21:15531056-15531237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
477-660
               

               
Cow position:
               
chr21:2292331-2292519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
477-676
               

               
Cow position:
               
chr21:29225370-29225171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
477-732
               

               
Cow position:
               
chr21:17218924-17218668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
477-745
               

               
Cow position:
               
chr21:426481-426754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 143
               

               
Conread position:
               
477-774
               

               
Cow position:
               
chr21:7132772-7132472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
477-778
               

               
Cow position:
               
chr21:36642596-36642900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 234
               

               
Conread position:
               
477-814
               

               
Cow position:
               
chr21:46849430-46849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
477-821
               

               
Cow position:
               
chr21:20160373-20160717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 145
               

               
Conread position:
               
477-823
               

               
Cow position:
               
chr21:6833741-6834091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 212
               

               
Conread position:
               
477-824
               

               
Cow position:
               
chr21:41974690-41974333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 264
               

               
Conread position:
               
477-835
               

               
Cow position:
               
chr21:31702267-31701899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 192
               

               
Conread position:
               
477-857
               

               
Cow position:
               
chr21:40786360-40786747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
478-621
               

               
Cow position:
               
chr21:10624182-10624036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
478-719
               

               
Cow position:
               
chr21:37122363-37122122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
98, 210
               

               
Conread position:
               
478-736
               

               
Cow position:
               
chr21:10960129-10959862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
478-737
               

               
Cow position:
               
chr21:17282393-17282655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
478-742
               

               
Cow position:
               
chr21:45372045-45372316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
478-743
               

               
Cow position:
               
chr21:26097720-26097446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 144
               

               
Conread position:
               
478-750
               

               
Cow position:
               
chr21:1510784-1511034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
478-754
               

               
Cow position:
               
chr21:32395991-32395707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
478-760
               

               
Cow position:
               
chr21:27065438-27065154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 105
               

               
Conread position:
               
478-760
               

               
Cow position:
               
chr21:31436036-31436327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
478-782
               

               
Cow position:
               
chr21:13763315-13763618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
98, 135
               

               
Conread position:
               
478-788
               

               
Cow position:
               
chr21:13718170-13717854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
89, 264
               

               
Conread position:
               
478-821
               

               
Cow position:
               
chr21:28993936-28993582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 278
               

               
Conread position:
               
478-822
               

               
Cow position:
               
chr21:2786102-2785737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
100, 159
               

               
Conread position:
               
478-832
               

               
Cow position:
               
chr21:8985239-8985596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 233
               

               
Conread position:
               
478-836
               

               
Cow position:
               
chr21:17709518-17709877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 261
               

               
Conread position:
               
478-849
               

               
Cow position:
               
chr21:19614867-19615235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
478-850
               

               
Cow position:
               
chr21:18850536-18850164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
99, 215
               

               
Conread position:
               
478-850
               

               
Cow position:
               
chr21:47802572-47802197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 264
               

               
Conread position:
               
479-602
               

               
Cow position:
               
chr21:17196817-17196692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
479-657
               

               
Cow position:
               
chr21:12331452-12331632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
479-731
               

               
Cow position:
               
chr21:34511551-34511294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 229
               

               
Conread position:
               
479-736
               

               
Cow position:
               
chr21:31278473-31278729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr21:24887688-24888040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
479-821
               

               
Cow position:
               
chr21:42384199-42384549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
479-826
               

               
Cow position:
               
chr21:34010696-34010351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
479-850
               

               
Cow position:
               
chr21:11740439-11740057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
480-722
               

               
Cow position:
               
chr21:40265525-40265769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
99, 221
               

               
Conread position:
               
480-744
               

               
Cow position:
               
chr21:32894478-32894218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
480-850
               

               
Cow position:
               
chr21:13128404-13128034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
481-731
               

               
Cow position:
               
chr21:8219545-8219804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
482-738
               

               
Cow position:
               
chr21:30354866-30355127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
483-804
               

               
Cow position:
               
chr21:32236994-32237317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 226
               

               
Conread position:
               
487-708
               

               
Cow position:
               
chr21:40530603-40530383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 115
               

               
Conread position:
               
487-742
               

               
Cow position:
               
chr21:19501724-19501986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
85, 167
               

               
Conread position:
               
487-760
               

               
Cow position:
               
chr21:11228255-11227985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 176
               

               
Conread position:
               
487-772
               

               
Cow position:
               
chr21:7452425-7452136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
487-781
               

               
Cow position:
               
chr21:4428387-4428679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 220
               

               
Conread position:
               
487-789
               

               
Cow position:
               
chr21:18718368-18718677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
487-791
               

               
Cow position:
               
chr21:5009478-5009173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 205
               

               
Conread position:
               
487-833
               

               
Cow position:
               
chr21:3987787-3987434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
487-834
               

               
Cow position:
               
chr21:19439163-19439511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
487-836
               

               
Cow position:
               
chr21:36762748-36763105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
488-646
               

               
Cow position:
               
chr21:43317582-43317416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr21:13168850-13169111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr21:13930837-13931098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr21:15905522-15905781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr21:25076688-25076427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr21:39561297-39561558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-744
               

               
Cow position:
               
chr21:18712986-18713242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 133
               

               
Conread position:
               
488-789
               

               
Cow position:
               
chr21:11707050-11706741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
488-856
               

               
Cow position:
               
chr21:13489343-13489714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 113
               

               
Conread position:
               
489-735
               

               
Cow position:
               
chr21:8233023-8232788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
489-760
               

               
Cow position:
               
chr21:11759763-11759489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
489-789
               

               
Cow position:
               
chr21:19170209-19169902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
168, 103
               

               
Conread position:
               
490-754
               

               
Cow position:
               
chr21:27406502-27406245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
254, 133
               

               
Conread position:
               
490-768
               

               
Cow position:
               
chr21:4092686-4092970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
490-803
               

               
Cow position:
               
chr21:44755075-44754758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
93, 87
               

               
Conread position:
               
491-694
               

               
Cow position:
               
chr21:10032060-10032266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
491-822
               

               
Cow position:
               
chr21:18783979-18783646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
491-828
               

               
Cow position:
               
chr21:26648301-26647966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
492-826
               

               
Cow position:
               
chr21:28734208-28733869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 245
               

               
Conread position:
               
493-760
               

               
Cow position:
               
chr21:16327255-16326997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
174, 111
               

               
Conread position:
               
493-819
               

               
Cow position:
               
chr21:24764972-24765326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
494-753
               

               
Cow position:
               
chr21:37662220-37661946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
495-731
               

               
Cow position:
               
chr21:47745966-47745725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
495-742
               

               
Cow position:
               
chr21:25173576-25173831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
495-825
               

               
Cow position:
               
chr21:10726988-10727319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
495-856
               

               
Cow position:
               
chr21:11639728-11640090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
498-731
               

               
Cow position:
               
chr21:5808711-5808481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
498-737
               

               
Cow position:
               
chr21:3614071-3614307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
498-742
               

               
Cow position:
               
chr21:2491080-2490829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
498-756
               

               
Cow position:
               
chr21:697275-697015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
137, 125
               

               
Conread position:
               
498-760
               

               
Cow position:
               
chr21:2359602-2359866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
498-826
               

               
Cow position:
               
chr21:40058515-40058850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
499-621
               

               
Cow position:
               
chr21:41039929-41040054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
499-891
               

               
Cow position:
               
chr21:36297190-36297595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
500-737
               

               
Cow position:
               
chr21:28998195-28997950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
500-834
               

               
Cow position:
               
chr21:26870586-26870920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
500-835
               

               
Cow position:
               
chr21:2679271-2679608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
502-743
               

               
Cow position:
               
chr21:21600946-21600698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
504-728
               

               
Cow position:
               
chr21:8888582-8888813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
504-828
               

               
Cow position:
               
chr21:18568933-18568596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 323
               

               
Conread position:
               
504-833
               

               
Cow position:
               
chr21:20377646-20377321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
504-850
               

               
Cow position:
               
chr21:28443645-28443311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
505-720
               

               
Cow position:
               
chr21:17205000-17204782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
506-689
               

               
Cow position:
               
chr21:36070548-36070361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
506-734
               

               
Cow position:
               
chr21:29954709-29954488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr21:1457903-1457660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 148
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr21:4957472-4957229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
506-825
               

               
Cow position:
               
chr21:39889026-39888707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
506-850
               

               
Cow position:
               
chr21:30607385-30607025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 213
               

               
Conread position:
               
507-717
               

               
Cow position:
               
chr21:46626788-46627010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
507-742
               

               
Cow position:
               
chr21:33632730-33632488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 147
               

               
Conread position:
               
507-790
               

               
Cow position:
               
chr21:1529509-1529226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
507-827
               

               
Cow position:
               
chr21:25127329-25127647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
507-850
               

               
Cow position:
               
chr21:10882145-10882505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 329
               

               
Conread position:
               
508-826
               

               
Cow position:
               
chr21:36793602-36793937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
62, 250
               

               
Conread position:
               
509-758
               

               
Cow position:
               
chr21:39822089-39821832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
509-760
               

               
Cow position:
               
chr21:23309760-23310015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
509-805
               

               
Cow position:
               
chr21:33562735-33563033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
509-832
               

               
Cow position:
               
chr21:42023856-42024170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
289, 68
               

               
Conread position:
               
510-725
               

               
Cow position:
               
chr21:8546495-8546268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
510-731
               

               
Cow position:
               
chr21:39313447-39313227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 143
               

               
Conread position:
               
510-776
               

               
Cow position:
               
chr21:20109110-20108839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
510-835
               

               
Cow position:
               
chr21:17511501-17511827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
510-838
               

               
Cow position:
               
chr21:17419819-17419486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 228
               

               
Conread position:
               
511-775
               

               
Cow position:
               
chr21:17643240-17642974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
511-850
               

               
Cow position:
               
chr21:36795323-36795665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 191
               

               
Conread position:
               
511-858
               

               
Cow position:
               
chr21:43357538-43357184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
512-758
               

               
Cow position:
               
chr21:35919312-35919566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 142
               

               
Conread position:
               
513-856
               

               
Cow position:
               
chr21:41155587-41155933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
514-789
               

               
Cow position:
               
chr21:10966959-10967238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
519-720
               

               
Cow position:
               
chr21:5985030-5985232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 187
               

               
Conread position:
               
519-736
               

               
Cow position:
               
chr21:23478985-23478768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
519-760
               

               
Cow position:
               
chr21:5482482-5482732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
519-772
               

               
Cow position:
               
chr21:41040596-41040859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
519-789
               

               
Cow position:
               
chr21:44114399-44114132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
519-832
               

               
Cow position:
               
chr21:36857360-36857674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
519-850
               

               
Cow position:
               
chr21:16188064-16187745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
520-622
               

               
Cow position:
               
chr21:43251845-43251740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
520-749
               

               
Cow position:
               
chr21:16166901-16166669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
520-758
               

               
Cow position:
               
chr21:32356622-32356377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
520-760
               

               
Cow position:
               
chr21:25282055-25281820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
520-800
               

               
Cow position:
               
chr21:4812001-4811718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
520-822
               

               
Cow position:
               
chr21:24945165-24944858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
522-737
               

               
Cow position:
               
chr21:14464299-14464531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
522-746
               

               
Cow position:
               
chr21:30650793-30650561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
523-772
               

               
Cow position:
               
chr21:26241563-26241815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
524-767
               

               
Cow position:
               
chr21:33350481-33350728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 214
               

               
Conread position:
               
524-835
               

               
Cow position:
               
chr21:15867051-15867367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
220, 126
               

               
Conread position:
               
526-748
               

               
Cow position:
               
chr21:39418319-39418545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
526-776
               

               
Cow position:
               
chr21:44252090-44251844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 168
               

               
Conread position:
               
527-802
               

               
Cow position:
               
chr21:13035310-13035024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
46, 216
               

               
Conread position:
               
528-780
               

               
Cow position:
               
chr21:21223024-21223288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
529-760
               

               
Cow position:
               
chr21:20329084-20329321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 199
               

               
Conread position:
               
529-835
               

               
Cow position:
               
chr21:5971095-5970788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
532-825
               

               
Cow position:
               
chr21:49700293-49699993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
533-760
               

               
Cow position:
               
chr21:19070844-19070607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
534-734
               

               
Cow position:
               
chr21:23150273-23150072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
536-753
               

               
Cow position:
               
chr21:34011355-34011127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
537-736
               

               
Cow position:
               
chr21:13256544-13256756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
537-810
               

               
Cow position:
               
chr21:23322332-23322050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
539-828
               

               
Cow position:
               
chr21:4267599-4267302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
540-760
               

               
Cow position:
               
chr21:17250741-17250957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
540-772
               

               
Cow position:
               
chr21:13316142-13316371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
545-825
               

               
Cow position:
               
chr21:41878232-41878513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
547-720
               

               
Cow position:
               
chr21:29015130-29014957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
155, 132
               

               
Conread position:
               
547-735
               

               
Cow position:
               
chr21:13410064-13409869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
547-789
               

               
Cow position:
               
chr21:13440000-13440242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
547-809
               

               
Cow position:
               
chr21:5636962-5636691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 193
               

               
Conread position:
               
548-740
               

               
Cow position:
               
chr21:39765612-39765804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
548-856
               

               
Cow position:
               
chr21:40899096-40899407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
25, 193
               

               
Conread position:
               
550-742
               

               
Cow position:
               
chr21:28907890-28907691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
550-828
               

               
Cow position:
               
chr21:11114467-11114757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
553-832
               

               
Cow position:
               
chr21:15445314-15445023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
553-832
               

               
Cow position:
               
chr21:27569391-27569121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
555-786
               

               
Cow position:
               
chr21:42348911-42348673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
556-827
               

               
Cow position:
               
chr21:27124360-27124079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 184
               

               
Conread position:
               
557-707
               

               
Cow position:
               
chr21:30257935-30257783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
557-746
               

               
Cow position:
               
chr21:28919854-28919662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 25
               

               
Conread position:
               
557-835
               

               
Cow position:
               
chr21:5203457-5203730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
559-826
               

               
Cow position:
               
chr21:8351530-8351268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
562-732
               

               
Cow position:
               
chr21:11877158-11877330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
563-735
               

               
Cow position:
               
chr21:16270514-16270682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
565-814
               

               
Cow position:
               
chr21:35061869-35062116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
565-850
               

               
Cow position:
               
chr21:12961118-12960836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
566-780
               

               
Cow position:
               
chr21:13585278-13585072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
566-850
               

               
Cow position:
               
chr21:28626019-28626304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
569-713
               

               
Cow position:
               
chr21:12075569-12075427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
569-736
               

               
Cow position:
               
chr21:35996955-35997124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
569-808
               

               
Cow position:
               
chr21:24094959-24094722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
569-823
               

               
Cow position:
               
chr21:6051289-6051546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 167
               

               
Conread position:
               
569-826
               

               
Cow position:
               
chr21:2927418-2927157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
569-833
               

               
Cow position:
               
chr21:8618059-8618327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
161, 11
               

               
Conread position:
               
569-850
               

               
Cow position:
               
chr21:29484769-29485044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
570-826
               

               
Cow position:
               
chr21:32665989-32665732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
570-857
               

               
Cow position:
               
chr21:31676284-31676568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
571-755
               

               
Cow position:
               
chr21:43300873-43300683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
571-826
               

               
Cow position:
               
chr21:31662246-31662508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 163
               

               
Conread position:
               
571-849
               

               
Cow position:
               
chr21:30592512-30592243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
165, 28
               

               
Conread position:
               
571-862
               

               
Cow position:
               
chr21:8974006-8974295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
119, 177
               

               
Conread position:
               
572-718
               

               
Cow position:
               
chr21:10858729-10858587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
572-736
               

               
Cow position:
               
chr21:37282096-37282260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
572-760
               

               
Cow position:
               
chr21:18781627-18781821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
144, 132
               

               
Conread position:
               
572-789
               

               
Cow position:
               
chr21:13303606-13303823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
164, 110
               

               
Conread position:
               
572-825
               

               
Cow position:
               
chr21:23535500-23535753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
574-850
               

               
Cow position:
               
chr21:9990304-9990572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
575-772
               

               
Cow position:
               
chr21:7709957-7710152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 5
               

               
Conread position:
               
575-835
               

               
Cow position:
               
chr21:9310834-9311097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
578-760
               

               
Cow position:
               
chr21:43236756-43236943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
579-822
               

               
Cow position:
               
chr21:45330814-45330561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
579-825
               

               
Cow position:
               
chr21:10633864-10633595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
580-732
               

               
Cow position:
               
chr21:4774977-4775130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
580-807
               

               
Cow position:
               
chr21:7067839-7068077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
580-807
               

               
Cow position:
               
chr21:40133950-40134185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
580-814
               

               
Cow position:
               
chr21:19083805-19083563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
580-843
               

               
Cow position:
               
chr21:37361679-37361419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
580-850
               

               
Cow position:
               
chr21:1058872-1059141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
580-850
               

               
Cow position:
               
chr21:17674441-17674163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
580-857
               

               
Cow position:
               
chr21:41620914-41621194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
99, 240
               

               
Conread position:
               
581-736
               

               
Cow position:
               
chr21:24714449-24714603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
581-737
               

               
Cow position:
               
chr21:19436321-19436166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
581-824
               

               
Cow position:
               
chr21:9278168-9278422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 238
               

               
Conread position:
               
581-850
               

               
Cow position:
               
chr21:19258622-19258884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 188
               

               
Conread position:
               
581-852
               

               
Cow position:
               
chr21:22860798-22861066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
581-853
               

               
Cow position:
               
chr21:3498294-3498559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 105
               

               
Conread position:
               
582-778
               

               
Cow position:
               
chr21:34159757-34159956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
582-823
               

               
Cow position:
               
chr21:34739646-34739884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
185, 36
               

               
Conread position:
               
582-832
               

               
Cow position:
               
chr21:41579548-41579800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
582-835
               

               
Cow position:
               
chr21:45355633-45355893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
162, 152
               

               
Conread position:
               
582-850
               

               
Cow position:
               
chr21:12801947-12801687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
582-850
               

               
Cow position:
               
chr21:18828512-18828240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
582-850
               

               
Cow position:
               
chr21:34835626-34835367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
165, 49
               

               
Conread position:
               
582-856
               

               
Cow position:
               
chr21:8549478-8549750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
582-858
               

               
Cow position:
               
chr21:24598456-24598730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
582-891
               

               
Cow position:
               
chr21:29002365-29002051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 156
               

               
Conread position:
               
583-814
               

               
Cow position:
               
chr21:41597613-41597853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
583-815
               

               
Cow position:
               
chr21:13850274-13850032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
583-848
               

               
Cow position:
               
chr21:47067089-47066837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
584-818
               

               
Cow position:
               
chr21:27521526-27521296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
152, 34
               

               
Conread position:
               
584-825
               

               
Cow position:
               
chr21:3381282-3381036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
584-856
               

               
Cow position:
               
chr21:17936169-17936440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
120, 203
               

               
Conread position:
               
585-737
               

               
Cow position:
               
chr21:42053465-42053316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
585-832
               

               
Cow position:
               
chr21:42145716-42145963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
586-826
               

               
Cow position:
               
chr21:17428305-17428542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
587-759
               

               
Cow position:
               
chr21:35897289-35897456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
587-821
               

               
Cow position:
               
chr21:3361212-3360976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
588-789
               

               
Cow position:
               
chr21:30150466-30150261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
588-789
               

               
Cow position:
               
chr21:46242436-46242233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
588-814
               

               
Cow position:
               
chr21:5425784-5426005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
588-850
               

               
Cow position:
               
chr21:18845212-18844950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
589-825
               

               
Cow position:
               
chr21:21077133-21077368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
589-827
               

               
Cow position:
               
chr21:39450364-39450118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
589-850
               

               
Cow position:
               
chr21:42135820-42135554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 161
               

               
Conread position:
               
590-768
               

               
Cow position:
               
chr21:42465634-42465816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 148
               

               
Conread position:
               
590-811
               

               
Cow position:
               
chr21:9998916-9998687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
590-832
               

               
Cow position:
               
chr21:23568013-23568268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 245
               

               
Conread position:
               
591-803
               

               
Cow position:
               
chr21:31277627-31277841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
591-807
               

               
Cow position:
               
chr21:1591357-1591577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
591-807
               

               
Cow position:
               
chr21:31253341-31253569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
591-825
               

               
Cow position:
               
chr21:8235737-8235513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
591-826
               

               
Cow position:
               
chr21:34565407-34565166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 147
               

               
Conread position:
               
592-737
               

               
Cow position:
               
chr21:37208302-37208155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
592-763
               

               
Cow position:
               
chr21:9334452-9334282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 93
               

               
Conread position:
               
592-781
               

               
Cow position:
               
chr21:10118360-10118555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
592-810
               

               
Cow position:
               
chr21:3047493-3047704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
198, 32
               

               
Conread position:
               
592-821
               

               
Cow position:
               
chr21:3763930-3763701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
592-850
               

               
Cow position:
               
chr21:38449645-38449383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 119
               

               
Conread position:
               
593-825
               

               
Cow position:
               
chr21:17193952-17193709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
593-849
               

               
Cow position:
               
chr21:45850902-45850648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
593-850
               

               
Cow position:
               
chr21:10601560-10601313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
593-856
               

               
Cow position:
               
chr21:47860996-47861270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 264
               

               
Conread position:
               
594-769
               

               
Cow position:
               
chr21:32559545-32559375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
594-786
               

               
Cow position:
               
chr21:40065506-40065313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
594-789
               

               
Cow position:
               
chr21:8648039-8648240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
594-789
               

               
Cow position:
               
chr21:39771325-39771128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
116, 161
               

               
Conread position:
               
594-814
               

               
Cow position:
               
chr21:5426755-5426973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
595-818
               

               
Cow position:
               
chr21:33791558-33791330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
136, 84
               

               
Conread position:
               
595-826
               

               
Cow position:
               
chr21:13365151-13365386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
596-820
               

               
Cow position:
               
chr21:47764301-47764077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
596-856
               

               
Cow position:
               
chr21:14452041-14452302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
597-825
               

               
Cow position:
               
chr21:40589671-40589442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 140
               

               
Conread position:
               
597-850
               

               
Cow position:
               
chr21:47465309-47465056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
598-790
               

               
Cow position:
               
chr21:28027616-28027812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
598-796
               

               
Cow position:
               
chr21:4268686-4268888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
600-825
               

               
Cow position:
               
chr21:18842423-18842195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
601-825
               

               
Cow position:
               
chr21:37345286-37345057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
601-850
               

               
Cow position:
               
chr21:15610971-15611207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
602-850
               

               
Cow position:
               
chr21:28190845-28191096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
602-850
               

               
Cow position:
               
chr21:46143760-46144021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
603-814
               

               
Cow position:
               
chr21:15911218-15911432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
141, 82
               

               
Conread position:
               
603-822
               

               
Cow position:
               
chr21:46829451-46829235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
603-848
               

               
Cow position:
               
chr21:13488337-13488586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 134
               

               
Conread position:
               
604-757
               

               
Cow position:
               
chr21:802475-802323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
607-786
               

               
Cow position:
               
chr21:27146172-27145988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
607-803
               

               
Cow position:
               
chr21:29979934-29979737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
607-813
               

               
Cow position:
               
chr21:17183743-17183954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
607-818
               

               
Cow position:
               
chr21:45375438-45375659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
608-821
               

               
Cow position:
               
chr21:18790733-18790520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
610-797
               

               
Cow position:
               
chr21:19937108-19936919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 109
               

               
Conread position:
               
610-827
               

               
Cow position:
               
chr21:32339912-32339693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
610-847
               

               
Cow position:
               
chr21:22194286-22194048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
610-853
               

               
Cow position:
               
chr21:41198586-41198334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 201
               

               
Conread position:
               
611-829
               

               
Cow position:
               
chr21:47495831-47495604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
613-832
               

               
Cow position:
               
chr21:21169667-21169444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
617-768
               

               
Cow position:
               
chr21:9028452-9028608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
618-825
               

               
Cow position:
               
chr21:28244309-28244513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
618-850
               

               
Cow position:
               
chr21:10114496-10114268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
126, 90
               

               
Conread position:
               
619-810
               

               
Cow position:
               
chr21:10000914-10001103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
620-823
               

               
Cow position:
               
chr21:18065089-18064873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 166
               

               
Conread position:
               
627-857
               

               
Cow position:
               
chr21:13840164-13840396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
628-818
               

               
Cow position:
               
chr21:45439407-45439203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
635-825
               

               
Cow position:
               
chr21:24642368-24642563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
639-848
               

               
Cow position:
               
chr21:18041989-18041787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
640-815
               

               
Cow position:
               
chr21:957521-957705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
643-827
               

               
Cow position:
               
chr21:20152806-20152999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
649-848
               

               
Cow position:
               
chr21:17856407-17856604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
650-825
               

               
Cow position:
               
chr21:11359902-11360078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
650-850
               

               
Cow position:
               
chr21:12462106-12461905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 85
               
Show alignments to all cow chromosomes.