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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_016468.5.5
        

               
Conread position:
               
377-732
               

               
Cow position:
               
chr23:8911008-8911359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 19
               

               
Conread position:
               
378-737
               

               
Cow position:
               
chr23:14566202-14565826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
385-742
               

               
Cow position:
               
chr23:3825290-3824925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
386-757
               

               
Cow position:
               
chr23:7852416-7852038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
191, 11
               

               
Conread position:
               
386-789
               

               
Cow position:
               
chr23:25562589-25562180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 11
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr23:39126334-39125953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
189, 110
               

               
Conread position:
               
396-693
               

               
Cow position:
               
chr23:40371058-40370753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 286
               

               
Conread position:
               
396-850
               

               
Cow position:
               
chr23:27564148-27563701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 138
               

               
Conread position:
               
397-531
               

               
Cow position:
               
chr23:6173261-6173128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
397-554
               

               
Cow position:
               
chr23:40688775-40688932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr23:3786191-3786366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr23:21395053-21394873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
397-573
               

               
Cow position:
               
chr23:15608352-15608180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr23:23885190-23885371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr23:26941528-26941707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
397-579
               

               
Cow position:
               
chr23:5539258-5539083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 110
               

               
Conread position:
               
397-588
               

               
Cow position:
               
chr23:5721441-5721264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
397-593
               

               
Cow position:
               
chr23:40890557-40890758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 193
               

               
Conread position:
               
397-595
               

               
Cow position:
               
chr23:4005460-4005656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
397-595
               

               
Cow position:
               
chr23:22936055-22936251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 80
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr23:19535225-19535017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr23:31609915-31609707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-605
               

               
Cow position:
               
chr23:4100637-4100848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-610
               

               
Cow position:
               
chr23:22031689-22031474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-611
               

               
Cow position:
               
chr23:13408847-13409064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
397-617
               

               
Cow position:
               
chr23:2369540-2369763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
397-617
               

               
Cow position:
               
chr23:7324298-7324523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr23:26798137-26797915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
180, 80
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr23:5441676-5441904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr23:14575971-14576199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
397-623
               

               
Cow position:
               
chr23:2721476-2721703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
397-658
               

               
Cow position:
               
chr23:35929552-35929816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
179, 41
               

               
Conread position:
               
397-668
               

               
Cow position:
               
chr23:10843875-10844144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
397-669
               

               
Cow position:
               
chr23:19316452-19316180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-676
               

               
Cow position:
               
chr23:26230873-26231151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
397-687
               

               
Cow position:
               
chr23:7311419-7311712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-688
               

               
Cow position:
               
chr23:977291-976997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-697
               

               
Cow position:
               
chr23:16072776-16073080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr23:3549436-3549130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr23:14910678-14910373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
182, 246
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr23:31606187-31606493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-702
               

               
Cow position:
               
chr23:9517915-9517607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-704
               

               
Cow position:
               
chr23:20734054-20734362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-712
               

               
Cow position:
               
chr23:15215095-15214782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
179, 213
               

               
Conread position:
               
397-721
               

               
Cow position:
               
chr23:25565743-25566076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 291
               

               
Conread position:
               
397-725
               

               
Cow position:
               
chr23:39745619-39745954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-730
               

               
Cow position:
               
chr23:9712660-9712998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr23:14266078-14266418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
397-732
               

               
Cow position:
               
chr23:1719063-1719410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
397-732
               

               
Cow position:
               
chr23:26824539-26824863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
119, 218
               

               
Conread position:
               
397-732
               

               
Cow position:
               
chr23:36688286-36687940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 237
               

               
Conread position:
               
397-737
               

               
Cow position:
               
chr23:18371366-18371027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
397-739
               

               
Cow position:
               
chr23:2723505-2723855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-741
               

               
Cow position:
               
chr23:9222906-9223238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
136, 129
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:2528638-2528287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:3485200-3485552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:3827331-3826979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:3873526-3873174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:7494373-7494725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:9267104-9266752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:10840629-10840981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:11409712-11409360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:14215475-14215125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
175, 80
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:14385949-14385597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:25380841-25381193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:26932543-26932191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:27423624-27423976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:28622139-28621787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:31585061-31585413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:39784516-39784868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr23:40710680-40711027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-748
               

               
Cow position:
               
chr23:40774087-40774446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-753
               

               
Cow position:
               
chr23:1430253-1429888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 346
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr23:10873903-10873534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
100, 258
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr23:24120314-24120682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
177, 257
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr23:28084914-28085281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr23:39747795-39748165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr23:1113711-1114080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr23:3734689-3734320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr23:4856089-4855719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr23:6442736-6442367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr23:11080144-11080514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 257
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr23:11782545-11782915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr23:12864447-12864816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr23:2791016-2790647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 128
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr23:4892456-4892820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 269
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr23:32007670-32007304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
180, 285
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr23:36027493-36027127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 80
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr23:40553382-40553011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 229
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:573508-573123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:3716921-3717303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:4267195-4267574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:5458498-5458877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:11070823-11071202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:21772149-21771770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:27734972-27735349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:29043543-29043922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:35284761-35284382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr23:38934474-38934099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-778
               

               
Cow position:
               
chr23:32877208-32876837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr23:610460-610851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr23:7293938-7294343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr23:4437367-4437757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 96
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr23:18797156-18796752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 398
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr23:26829002-26829386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 231
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr23:27402893-27403279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 225
               

               
Conread position:
               
397-784
               

               
Cow position:
               
chr23:15569321-15569716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-784
               

               
Cow position:
               
chr23:15702958-15702565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 229
               

               
Conread position:
               
397-786
               

               
Cow position:
               
chr23:5623821-5623425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr23:221622-222011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 94
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr23:1131650-1132052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 291
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr23:14958133-14957730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr23:24098885-24099284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 196
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr23:28916087-28916485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 277
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr23:32650528-32650126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
25, 311
               

               
Conread position:
               
397-790
               

               
Cow position:
               
chr23:26741904-26741513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 294
               

               
Conread position:
               
397-792
               

               
Cow position:
               
chr23:3877420-3877021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 310
               

               
Conread position:
               
397-795
               

               
Cow position:
               
chr23:37198568-37198162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 184
               

               
Conread position:
               
397-803
               

               
Cow position:
               
chr23:9874233-9874628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 57
               

               
Conread position:
               
397-807
               

               
Cow position:
               
chr23:13520005-13520414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 199
               

               
Conread position:
               
397-807
               

               
Cow position:
               
chr23:25865140-25864730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 229
               

               
Conread position:
               
397-813
               

               
Cow position:
               
chr23:15710532-15710103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
397-814
               

               
Cow position:
               
chr23:16246291-16246703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 249
               

               
Conread position:
               
397-820
               

               
Cow position:
               
chr23:22804276-22804701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 89
               

               
Conread position:
               
397-821
               

               
Cow position:
               
chr23:13598901-13599322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 142
               

               
Conread position:
               
397-823
               

               
Cow position:
               
chr23:1647167-1647597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 55
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr23:671929-672366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr23:18367238-18367681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
397-826
               

               
Cow position:
               
chr23:22530854-22530433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
397-827
               

               
Cow position:
               
chr23:10554464-10554026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 229
               

               
Conread position:
               
397-828
               

               
Cow position:
               
chr23:22143267-22142826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
397-828
               

               
Cow position:
               
chr23:31353894-31354337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 250
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr23:28306604-28307046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 95
               

               
Conread position:
               
397-835
               

               
Cow position:
               
chr23:4636592-4636144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 415
               

               
Conread position:
               
397-838
               

               
Cow position:
               
chr23:11344251-11344700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 412
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr23:10852602-10853056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 281
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr23:20980393-20980838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 73
               

               
Conread position:
               
397-850
               

               
Cow position:
               
chr23:30663077-30662624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 210
               

               
Conread position:
               
397-853
               

               
Cow position:
               
chr23:34315421-34314950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 212
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr23:1959886-1960343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr23:7835946-7835484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
397-857
               

               
Cow position:
               
chr23:8959146-8959604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 232
               

               
Conread position:
               
397-857
               

               
Cow position:
               
chr23:18802726-18802262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 415
               

               
Conread position:
               
398-572
               

               
Cow position:
               
chr23:25665063-25664890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 142
               

               
Conread position:
               
398-575
               

               
Cow position:
               
chr23:4741198-4741016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
398-579
               

               
Cow position:
               
chr23:20389113-20388930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
398-653
               

               
Cow position:
               
chr23:28743461-28743721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
398-702
               

               
Cow position:
               
chr23:22170665-22170973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 225
               

               
Conread position:
               
398-742
               

               
Cow position:
               
chr23:20456073-20455722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
398-760
               

               
Cow position:
               
chr23:2472541-2472190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
237, 179
               

               
Conread position:
               
398-768
               

               
Cow position:
               
chr23:32657450-32657830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
398-789
               

               
Cow position:
               
chr23:40825542-40825937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 233
               

               
Conread position:
               
398-823
               

               
Cow position:
               
chr23:1254228-1254666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
181, 54
               

               
Conread position:
               
398-846
               

               
Cow position:
               
chr23:1428350-1428808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
147, 115
               

               
Conread position:
               
399-810
               

               
Cow position:
               
chr23:20435514-20435090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
56, 237
               

               
Conread position:
               
400-575
               

               
Cow position:
               
chr23:36198795-36198970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
400-810
               

               
Cow position:
               
chr23:6223570-6223949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
400-821
               

               
Cow position:
               
chr23:3209065-3208643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
400-824
               

               
Cow position:
               
chr23:32309230-32309664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 282
               

               
Conread position:
               
400-891
               

               
Cow position:
               
chr23:26986731-26986230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 292
               

               
Conread position:
               
401-712
               

               
Cow position:
               
chr23:39207356-39207044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 71
               

               
Conread position:
               
401-722
               

               
Cow position:
               
chr23:20605748-20605399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chr23:20170505-20170343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
403-576
               

               
Cow position:
               
chr23:39775264-39775438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
403-606
               

               
Cow position:
               
chr23:26632069-26632272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr23:18108266-18108589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
403-732
               

               
Cow position:
               
chr23:9712054-9711699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
403-762
               

               
Cow position:
               
chr23:2470150-2470507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 174
               

               
Conread position:
               
403-830
               

               
Cow position:
               
chr23:3745160-3745595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
404-570
               

               
Cow position:
               
chr23:31602194-31602026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
404-573
               

               
Cow position:
               
chr23:21343746-21343574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
404-573
               

               
Cow position:
               
chr23:31194633-31194464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr23:3969050-3968881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr23:4517299-4517471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr23:11044738-11044906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr23:16665013-16664847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr23:24562334-24562159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr23:26795664-26795491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
404-582
               

               
Cow position:
               
chr23:21659506-21659693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
404-588
               

               
Cow position:
               
chr23:9652967-9652776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
404-588
               

               
Cow position:
               
chr23:11814093-11813905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
404-590
               

               
Cow position:
               
chr23:30244245-30244435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
404-590
               

               
Cow position:
               
chr23:33332271-33332082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-592
               

               
Cow position:
               
chr23:20057559-20057371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
404-592
               

               
Cow position:
               
chr23:26305931-26306116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
404-603
               

               
Cow position:
               
chr23:13649196-13648994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-606
               

               
Cow position:
               
chr23:6245380-6245175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
404-611
               

               
Cow position:
               
chr23:22606044-22605832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
404-617
               

               
Cow position:
               
chr23:23192681-23192467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 142
               

               
Conread position:
               
404-622
               

               
Cow position:
               
chr23:770733-770512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-622
               

               
Cow position:
               
chr23:954035-953814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-622
               

               
Cow position:
               
chr23:20977497-20977718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-623
               

               
Cow position:
               
chr23:18655440-18655662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
404-657
               

               
Cow position:
               
chr23:35941782-35942046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 44
               

               
Conread position:
               
404-669
               

               
Cow position:
               
chr23:33599826-33599560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
404-677
               

               
Cow position:
               
chr23:35937577-35937848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
144, 173
               

               
Conread position:
               
404-684
               

               
Cow position:
               
chr23:497051-496759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
404-685
               

               
Cow position:
               
chr23:2531785-2531500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
404-697
               

               
Cow position:
               
chr23:29699546-29699239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
404-700
               

               
Cow position:
               
chr23:10936530-10936231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
168, 250
               

               
Conread position:
               
404-700
               

               
Cow position:
               
chr23:28076609-28076310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
404-712
               

               
Cow position:
               
chr23:38708766-38709073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
404-723
               

               
Cow position:
               
chr23:772205-772523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
172, 218
               

               
Conread position:
               
404-728
               

               
Cow position:
               
chr23:27529720-27529412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:1696383-1696710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
290, 214
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:1745236-1745568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:2802740-2802407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:3167797-3168134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:5151533-5151877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:11209550-11209896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 334
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:15657245-15656916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr23:20001632-20001950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
404-735
               

               
Cow position:
               
chr23:18491728-18492059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
174, 54
               

               
Conread position:
               
404-735
               

               
Cow position:
               
chr23:37191028-37190690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 286
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr23:20586166-20585826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 285
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr23:31395381-31395041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr23:9641866-9641526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr23:11973409-11973753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr23:31277261-31277594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
404-738
               

               
Cow position:
               
chr23:14642648-14642303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
404-739
               

               
Cow position:
               
chr23:20025708-20026061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
404-741
               

               
Cow position:
               
chr23:9268143-9268486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 219
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr23:4080086-4079740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr23:31127050-31126705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-748
               

               
Cow position:
               
chr23:21351189-21350838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-753
               

               
Cow position:
               
chr23:15020680-15021037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-753
               

               
Cow position:
               
chr23:39049856-39049517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
168, 68
               

               
Conread position:
               
404-754
               

               
Cow position:
               
chr23:31493438-31493779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 156
               

               
Conread position:
               
404-754
               

               
Cow position:
               
chr23:41285493-41285832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 101
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr23:19056596-19056239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr23:3286511-3286875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr23:15764101-15764456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
168, 68
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr23:11459476-11459104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 258
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr23:19493619-19493983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 223
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr23:29447488-29447129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 289
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr23:40633623-40633260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
404-762
               

               
Cow position:
               
chr23:8708158-8708525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
404-763
               

               
Cow position:
               
chr23:3328356-3327993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr23:2311992-2311620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr23:2320182-2319810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr23:21789217-21788843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
404-772
               

               
Cow position:
               
chr23:26840998-26841365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 174
               

               
Conread position:
               
404-778
               

               
Cow position:
               
chr23:416718-417088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 179
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr23:1535876-1536260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 224
               

               
Conread position:
               
404-783
               

               
Cow position:
               
chr23:8698000-8698382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 194
               

               
Conread position:
               
404-786
               

               
Cow position:
               
chr23:1604781-1605167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 198
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr23:7596775-7596389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 241
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr23:16495515-16495124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 146
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr23:29459519-29459148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
301, 123
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr23:40734773-40734387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 303
               

               
Conread position:
               
404-790
               

               
Cow position:
               
chr23:7791359-7790975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 218
               

               
Conread position:
               
404-796
               

               
Cow position:
               
chr23:3727844-3727443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 74
               

               
Conread position:
               
404-807
               

               
Cow position:
               
chr23:30889202-30889596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
172, 64
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr23:4608839-4608415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 330
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr23:30656607-30656208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
404-813
               

               
Cow position:
               
chr23:6593162-6592730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 241
               

               
Conread position:
               
404-813
               

               
Cow position:
               
chr23:36129345-36128937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 165
               

               
Conread position:
               
404-817
               

               
Cow position:
               
chr23:1924284-1923863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
404-821
               

               
Cow position:
               
chr23:9595275-9594853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 250
               

               
Conread position:
               
404-823
               

               
Cow position:
               
chr23:344621-344194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 334
               

               
Conread position:
               
404-823
               

               
Cow position:
               
chr23:792474-792050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
404-823
               

               
Cow position:
               
chr23:13511291-13511715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 18
               

               
Conread position:
               
404-824
               

               
Cow position:
               
chr23:19002520-19002081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 224
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr23:18698473-18698041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 291
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr23:33940581-33940178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
404-826
               

               
Cow position:
               
chr23:1670471-1670882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
404-826
               

               
Cow position:
               
chr23:36308971-36309404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
404-827
               

               
Cow position:
               
chr23:8005808-8006225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
404-828
               

               
Cow position:
               
chr23:30633826-30633398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 241
               

               
Conread position:
               
404-831
               

               
Cow position:
               
chr23:11473951-11473520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
404-832
               

               
Cow position:
               
chr23:14191105-14191541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 192
               

               
Conread position:
               
404-835
               

               
Cow position:
               
chr23:29625984-29626407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
95, 139
               

               
Conread position:
               
404-846
               

               
Cow position:
               
chr23:6720722-6720284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 69
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr23:1721448-1720983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 296
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr23:7844843-7845292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr23:406602-406171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 72
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr23:1289856-1290298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
64, 216
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr23:10014100-10014541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 244
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr23:11128787-11129234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 143
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr23:11844858-11845277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
404-851
               

               
Cow position:
               
chr23:39806419-39806874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 11
               

               
Conread position:
               
404-878
               

               
Cow position:
               
chr23:1009845-1009369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
405-575
               

               
Cow position:
               
chr23:31423078-31422904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
405-689
               

               
Cow position:
               
chr23:30165714-30165438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
405-703
               

               
Cow position:
               
chr23:19737575-19737268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
405-757
               

               
Cow position:
               
chr23:27314510-27314870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
405-758
               

               
Cow position:
               
chr23:25352128-25352489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
405-760
               

               
Cow position:
               
chr23:39389819-39390182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 249
               

               
Conread position:
               
405-768
               

               
Cow position:
               
chr23:35926153-35926514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
405-789
               

               
Cow position:
               
chr23:4273737-4274128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
405-850
               

               
Cow position:
               
chr23:15057072-15056640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
406-588
               

               
Cow position:
               
chr23:3282828-3282644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
170, 92
               

               
Conread position:
               
406-626
               

               
Cow position:
               
chr23:11079042-11079261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
406-631
               

               
Cow position:
               
chr23:39028350-39028585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
406-758
               

               
Cow position:
               
chr23:28183340-28183700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
406-804
               

               
Cow position:
               
chr23:1640367-1640772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 336
               

               
Conread position:
               
407-575
               

               
Cow position:
               
chr23:5420951-5420784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
407-807
               

               
Cow position:
               
chr23:1700480-1700869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
272, 61
               

               
Conread position:
               
408-627
               

               
Cow position:
               
chr23:10960729-10960946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
171, 15
               

               
Conread position:
               
408-657
               

               
Cow position:
               
chr23:6664502-6664761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 222
               

               
Conread position:
               
408-701
               

               
Cow position:
               
chr23:30364445-30364147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 219
               

               
Conread position:
               
408-722
               

               
Cow position:
               
chr23:19967184-19967503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
408-780
               

               
Cow position:
               
chr23:14245062-14245446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
408-856
               

               
Cow position:
               
chr23:41220692-41220216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
73, 191
               

               
Conread position:
               
408-866
               

               
Cow position:
               
chr23:17848168-17848627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
409-669
               

               
Cow position:
               
chr23:7374441-7374696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
167, 94
               

               
Conread position:
               
409-687
               

               
Cow position:
               
chr23:18204044-18204321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
167, 173
               

               
Conread position:
               
409-736
               

               
Cow position:
               
chr23:4067678-4068003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
409-736
               

               
Cow position:
               
chr23:16170252-16170583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 219
               

               
Conread position:
               
409-738
               

               
Cow position:
               
chr23:39573742-39573401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
409-759
               

               
Cow position:
               
chr23:38580863-38581214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
169, 59
               

               
Conread position:
               
409-769
               

               
Cow position:
               
chr23:16610257-16609885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
409-789
               

               
Cow position:
               
chr23:29441442-29441052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
409-810
               

               
Cow position:
               
chr23:1398475-1398069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 200
               

               
Conread position:
               
409-851
               

               
Cow position:
               
chr23:41472174-41472623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 209
               

               
Conread position:
               
409-857
               

               
Cow position:
               
chr23:25676109-25675692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 49
               

               
Conread position:
               
411-575
               

               
Cow position:
               
chr23:32662356-32662185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
411-712
               

               
Cow position:
               
chr23:14430930-14430620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
411-768
               

               
Cow position:
               
chr23:32052153-32052520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
411-773
               

               
Cow position:
               
chr23:1321628-1321273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
412-612
               

               
Cow position:
               
chr23:27899913-27900122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
412-760
               

               
Cow position:
               
chr23:28032004-28032359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
412-781
               

               
Cow position:
               
chr23:3710475-3710848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
167, 250
               

               
Conread position:
               
412-808
               

               
Cow position:
               
chr23:2180090-2179682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 267
               

               
Conread position:
               
412-810
               

               
Cow position:
               
chr23:28120064-28120469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
165, 210
               

               
Conread position:
               
412-848
               

               
Cow position:
               
chr23:533788-534229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 177
               

               
Conread position:
               
414-657
               

               
Cow position:
               
chr23:34264949-34264703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
162, 111
               

               
Conread position:
               
414-705
               

               
Cow position:
               
chr23:39813017-39813305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
414-789
               

               
Cow position:
               
chr23:16383906-16383528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 7
               

               
Conread position:
               
415-708
               

               
Cow position:
               
chr23:30338074-30338378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
415-768
               

               
Cow position:
               
chr23:24504808-24505171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 213
               

               
Conread position:
               
416-646
               

               
Cow position:
               
chr23:32114193-32114404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
418-712
               

               
Cow position:
               
chr23:35653671-35653963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
421-855
               

               
Cow position:
               
chr23:2021883-2021454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 175
               

               
Conread position:
               
423-556
               

               
Cow position:
               
chr23:26093466-26093330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
423-588
               

               
Cow position:
               
chr23:8291243-8291411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
423-604
               

               
Cow position:
               
chr23:9806537-9806356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
423-615
               

               
Cow position:
               
chr23:4953710-4953903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
423-675
               

               
Cow position:
               
chr23:39761941-39762194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
423-737
               

               
Cow position:
               
chr23:34855089-34854776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 251
               

               
Conread position:
               
423-754
               

               
Cow position:
               
chr23:4579465-4579128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 288
               

               
Conread position:
               
423-758
               

               
Cow position:
               
chr23:8308750-8308407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
423-760
               

               
Cow position:
               
chr23:4293222-4293561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
423-788
               

               
Cow position:
               
chr23:34347908-34348268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 211
               

               
Conread position:
               
423-809
               

               
Cow position:
               
chr23:361344-360950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
423-818
               

               
Cow position:
               
chr23:29471529-29471152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
423-835
               

               
Cow position:
               
chr23:20745016-20744602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 269
               

               
Conread position:
               
423-855
               

               
Cow position:
               
chr23:1047302-1046870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 199
               

               
Conread position:
               
424-768
               

               
Cow position:
               
chr23:15529360-15529708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
225, 159
               

               
Conread position:
               
424-768
               

               
Cow position:
               
chr23:33074804-33075156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
148, 48
               

               
Conread position:
               
424-814
               

               
Cow position:
               
chr23:26318993-26319388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 93
               

               
Conread position:
               
424-825
               

               
Cow position:
               
chr23:25669492-25669112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 123
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr23:20545800-20545476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr23:25336718-25336394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr23:39110669-39110993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
426-621
               

               
Cow position:
               
chr23:14970010-14969813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
426-760
               

               
Cow position:
               
chr23:39741159-39740823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 170
               

               
Conread position:
               
427-622
               

               
Cow position:
               
chr23:921994-922192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
427-763
               

               
Cow position:
               
chr23:3904553-3904896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
429-616
               

               
Cow position:
               
chr23:28222645-28222835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
429-768
               

               
Cow position:
               
chr23:31638399-31638746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
429-789
               

               
Cow position:
               
chr23:16172238-16172606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 197
               

               
Conread position:
               
431-807
               

               
Cow position:
               
chr23:39793034-39793414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
432-575
               

               
Cow position:
               
chr23:29741936-29742079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
432-737
               

               
Cow position:
               
chr23:778381-778067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
432-742
               

               
Cow position:
               
chr23:1581961-1582278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
432-760
               

               
Cow position:
               
chr23:17846898-17847224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
432-783
               

               
Cow position:
               
chr23:28118516-28118163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 10
               

               
Conread position:
               
432-810
               

               
Cow position:
               
chr23:18322837-18322449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
432-813
               

               
Cow position:
               
chr23:21336908-21336517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
433-735
               

               
Cow position:
               
chr23:7750770-7751073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 222
               

               
Conread position:
               
433-758
               

               
Cow position:
               
chr23:11711918-11711585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
434-827
               

               
Cow position:
               
chr23:7175207-7175600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 300
               

               
Conread position:
               
434-827
               

               
Cow position:
               
chr23:19753367-19752959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
434-850
               

               
Cow position:
               
chr23:2502279-2501853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
435-622
               

               
Cow position:
               
chr23:30588806-30588996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
436-789
               

               
Cow position:
               
chr23:7392697-7392349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 235
               

               
Conread position:
               
437-742
               

               
Cow position:
               
chr23:292629-292941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
437-842
               

               
Cow position:
               
chr23:6158618-6158223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
441-810
               

               
Cow position:
               
chr23:28359056-28358680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 170
               

               
Conread position:
               
444-789
               

               
Cow position:
               
chr23:5870593-5870237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
445-851
               

               
Cow position:
               
chr23:4980933-4980543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
446-605
               

               
Cow position:
               
chr23:19266183-19266018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
446-731
               

               
Cow position:
               
chr23:29467133-29466854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
446-746
               

               
Cow position:
               
chr23:26373761-26374069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
447-742
               

               
Cow position:
               
chr23:15271640-15271338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
455-857
               

               
Cow position:
               
chr23:34416174-34416569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 210
               

               
Conread position:
               
456-644
               

               
Cow position:
               
chr23:9231929-9231740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
456-749
               

               
Cow position:
               
chr23:22298414-22298115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 170
               

               
Conread position:
               
456-819
               

               
Cow position:
               
chr23:40777869-40778242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 161
               

               
Conread position:
               
458-747
               

               
Cow position:
               
chr23:25883288-25883580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
460-606
               

               
Cow position:
               
chr23:1992103-1991955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
460-736
               

               
Cow position:
               
chr23:36146835-36146567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
248, 117
               

               
Conread position:
               
461-602
               

               
Cow position:
               
chr23:18624589-18624733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
461-821
               

               
Cow position:
               
chr23:14739064-14739421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 157
               

               
Conread position:
               
462-744
               

               
Cow position:
               
chr23:666495-666214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 120
               

               
Conread position:
               
463-742
               

               
Cow position:
               
chr23:22011096-22011382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
468-602
               

               
Cow position:
               
chr23:1065636-1065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
469-735
               

               
Cow position:
               
chr23:25362962-25363236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
470-857
               

               
Cow position:
               
chr23:40502883-40502508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 145
               

               
Conread position:
               
472-699
               

               
Cow position:
               
chr23:29982772-29982545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
476-736
               

               
Cow position:
               
chr23:26003690-26003953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
477-700
               

               
Cow position:
               
chr23:30752214-30751988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
477-716
               

               
Cow position:
               
chr23:29811277-29811517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
477-722
               

               
Cow position:
               
chr23:40081092-40081345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
477-736
               

               
Cow position:
               
chr23:23470577-23470830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
477-737
               

               
Cow position:
               
chr23:1760176-1760423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
477-758
               

               
Cow position:
               
chr23:7900184-7899909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
477-761
               

               
Cow position:
               
chr23:11010042-11009760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
202, 66
               

               
Conread position:
               
477-779
               

               
Cow position:
               
chr23:14896167-14895868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
477-786
               

               
Cow position:
               
chr23:30622567-30622250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
100, 149
               

               
Conread position:
               
477-821
               

               
Cow position:
               
chr23:33601893-33601550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 130
               

               
Conread position:
               
477-826
               

               
Cow position:
               
chr23:11434640-11434275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 223
               

               
Conread position:
               
477-850
               

               
Cow position:
               
chr23:4996457-4996094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
477-850
               

               
Cow position:
               
chr23:24866933-24867310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
201, 97
               

               
Conread position:
               
478-592
               

               
Cow position:
               
chr23:2269685-2269571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
478-621
               

               
Cow position:
               
chr23:11163350-11163205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 135
               

               
Conread position:
               
478-707
               

               
Cow position:
               
chr23:10518104-10517871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
478-730
               

               
Cow position:
               
chr23:26322797-26322549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 204
               

               
Conread position:
               
478-736
               

               
Cow position:
               
chr23:30912675-30912406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
478-736
               

               
Cow position:
               
chr23:40526343-40526079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
478-759
               

               
Cow position:
               
chr23:3321808-3322097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 176
               

               
Conread position:
               
478-767
               

               
Cow position:
               
chr23:9294125-9293828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
478-768
               

               
Cow position:
               
chr23:479156-479453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
478-774
               

               
Cow position:
               
chr23:2371008-2371300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
478-810
               

               
Cow position:
               
chr23:14839104-14838775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 146
               

               
Conread position:
               
478-823
               

               
Cow position:
               
chr23:37992624-37992962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 130
               

               
Conread position:
               
478-825
               

               
Cow position:
               
chr23:19636635-19636277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
478-827
               

               
Cow position:
               
chr23:17796689-17796326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 347
               

               
Conread position:
               
478-827
               

               
Cow position:
               
chr23:25408465-25408816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
478-828
               

               
Cow position:
               
chr23:32961748-32961383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 153
               

               
Conread position:
               
478-834
               

               
Cow position:
               
chr23:35070112-35070464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 139
               

               
Conread position:
               
478-855
               

               
Cow position:
               
chr23:11376503-11376122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
101, 139
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr23:16058228-16058563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 261
               

               
Conread position:
               
480-822
               

               
Cow position:
               
chr23:16700389-16700061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 62
               

               
Conread position:
               
480-823
               

               
Cow position:
               
chr23:10415394-10415048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 265
               

               
Conread position:
               
480-850
               

               
Cow position:
               
chr23:14164773-14164397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
481-732
               

               
Cow position:
               
chr23:353947-353693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
483-735
               

               
Cow position:
               
chr23:5691121-5690868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 139
               

               
Conread position:
               
485-736
               

               
Cow position:
               
chr23:15729052-15728797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
487-737
               

               
Cow position:
               
chr23:31607535-31607267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
487-750
               

               
Cow position:
               
chr23:18487387-18487658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
487-810
               

               
Cow position:
               
chr23:5389341-5389665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
487-828
               

               
Cow position:
               
chr23:7429087-7429436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 167
               

               
Conread position:
               
488-676
               

               
Cow position:
               
chr23:9073136-9072948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 164
               

               
Conread position:
               
488-718
               

               
Cow position:
               
chr23:28987881-28988111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
488-724
               

               
Cow position:
               
chr23:31827353-31827596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
488-737
               

               
Cow position:
               
chr23:15003643-15003890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr23:3208573-3208312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
488-754
               

               
Cow position:
               
chr23:17678253-17677979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-758
               

               
Cow position:
               
chr23:19202991-19202714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-850
               

               
Cow position:
               
chr23:38455546-38455178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
489-765
               

               
Cow position:
               
chr23:15180792-15181073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
489-851
               

               
Cow position:
               
chr23:40780967-40781332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
490-684
               

               
Cow position:
               
chr23:13945397-13945594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
490-768
               

               
Cow position:
               
chr23:11965470-11965184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 164
               

               
Conread position:
               
491-825
               

               
Cow position:
               
chr23:7402347-7402683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 198
               

               
Conread position:
               
493-693
               

               
Cow position:
               
chr23:19910308-19910105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
493-755
               

               
Cow position:
               
chr23:9235422-9235163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
493-758
               

               
Cow position:
               
chr23:33658196-33657923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 161
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr23:9734063-9734385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
494-773
               

               
Cow position:
               
chr23:27861983-27862259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
495-739
               

               
Cow position:
               
chr23:208488-208726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
495-753
               

               
Cow position:
               
chr23:28206260-28206517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
249, 79
               

               
Conread position:
               
495-803
               

               
Cow position:
               
chr23:27996783-27997092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 84
               

               
Conread position:
               
496-779
               

               
Cow position:
               
chr23:28052923-28053208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 208
               

               
Conread position:
               
496-848
               

               
Cow position:
               
chr23:1883039-1883393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 242
               

               
Conread position:
               
498-695
               

               
Cow position:
               
chr23:1240708-1240907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 163
               

               
Conread position:
               
498-700
               

               
Cow position:
               
chr23:12570792-12570587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 156
               

               
Conread position:
               
498-708
               

               
Cow position:
               
chr23:5738080-5737869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
498-789
               

               
Cow position:
               
chr23:805972-806271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr23:26932799-26933049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
500-678
               

               
Cow position:
               
chr23:11332203-11332383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
500-768
               

               
Cow position:
               
chr23:30334479-30334206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
124, 151
               

               
Conread position:
               
503-808
               

               
Cow position:
               
chr23:12896954-12896644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 251
               

               
Conread position:
               
503-850
               

               
Cow position:
               
chr23:5162080-5162434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 195
               

               
Conread position:
               
504-735
               

               
Cow position:
               
chr23:13514835-13515065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
505-725
               

               
Cow position:
               
chr23:9133011-9132789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
506-622
               

               
Cow position:
               
chr23:18091193-18091312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
506-732
               

               
Cow position:
               
chr23:35369354-35369125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
506-779
               

               
Cow position:
               
chr23:29824408-29824130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
506-789
               

               
Cow position:
               
chr23:24509359-24509644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
506-821
               

               
Cow position:
               
chr23:34356314-34356621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
506-850
               

               
Cow position:
               
chr23:32555519-32555172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 244
               

               
Conread position:
               
507-797
               

               
Cow position:
               
chr23:8327319-8327623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
508-728
               

               
Cow position:
               
chr23:11399760-11399985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
510-832
               

               
Cow position:
               
chr23:37065501-37065832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
511-758
               

               
Cow position:
               
chr23:27378137-27378392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr23:39778077-39778321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
221, 148
               

               
Conread position:
               
511-772
               

               
Cow position:
               
chr23:29175650-29175910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
169, 66
               

               
Conread position:
               
512-736
               

               
Cow position:
               
chr23:2799232-2799457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
512-755
               

               
Cow position:
               
chr23:39255083-39254831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
513-826
               

               
Cow position:
               
chr23:39752777-39753098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 228
               

               
Conread position:
               
514-810
               

               
Cow position:
               
chr23:6995302-6995016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
277, 100
               

               
Conread position:
               
516-760
               

               
Cow position:
               
chr23:4819050-4819302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
516-828
               

               
Cow position:
               
chr23:20752680-20752999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
519-732
               

               
Cow position:
               
chr23:1664360-1664576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
158, 202
               

               
Conread position:
               
519-789
               

               
Cow position:
               
chr23:1337645-1337358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
519-850
               

               
Cow position:
               
chr23:4529223-4528876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 309
               

               
Conread position:
               
520-737
               

               
Cow position:
               
chr23:11404596-11404367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
522-751
               

               
Cow position:
               
chr23:12660977-12661204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
523-746
               

               
Cow position:
               
chr23:22574385-22574166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
527-732
               

               
Cow position:
               
chr23:1905705-1905915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
528-669
               

               
Cow position:
               
chr23:1922389-1922246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
530-781
               

               
Cow position:
               
chr23:6680798-6680547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
533-737
               

               
Cow position:
               
chr23:39780295-39780499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 150
               

               
Conread position:
               
533-773
               

               
Cow position:
               
chr23:25192861-25193109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
533-807
               

               
Cow position:
               
chr23:10085497-10085220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 180
               

               
Conread position:
               
533-857
               

               
Cow position:
               
chr23:39309431-39309102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 271
               

               
Conread position:
               
537-755
               

               
Cow position:
               
chr23:7937849-7937636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
537-835
               

               
Cow position:
               
chr23:587083-587390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 289
               

               
Conread position:
               
538-687
               

               
Cow position:
               
chr23:36172234-36172387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
539-732
               

               
Cow position:
               
chr23:26462160-26461964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
540-702
               

               
Cow position:
               
chr23:4903271-4903433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
540-781
               

               
Cow position:
               
chr23:16563533-16563775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
547-813
               

               
Cow position:
               
chr23:3247288-3247554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 131
               

               
Conread position:
               
548-737
               

               
Cow position:
               
chr23:22660868-22660689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
549-789
               

               
Cow position:
               
chr23:29329790-29330045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
551-691
               

               
Cow position:
               
chr23:13674213-13674074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
551-850
               

               
Cow position:
               
chr23:4726503-4726795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
552-732
               

               
Cow position:
               
chr23:35366396-35366213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
552-857
               

               
Cow position:
               
chr23:31601756-31601443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 251
               

               
Conread position:
               
555-858
               

               
Cow position:
               
chr23:11045189-11045498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
559-732
               

               
Cow position:
               
chr23:1545926-1546100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
559-761
               

               
Cow position:
               
chr23:5143891-5143681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
566-736
               

               
Cow position:
               
chr23:35363055-35362884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
566-821
               

               
Cow position:
               
chr23:3262780-3262517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
112, 102
               

               
Conread position:
               
566-847
               

               
Cow position:
               
chr23:22396722-22396445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
569-768
               

               
Cow position:
               
chr23:4338883-4338682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
569-809
               

               
Cow position:
               
chr23:11380537-11380288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
569-814
               

               
Cow position:
               
chr23:19538271-19538026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
569-820
               

               
Cow position:
               
chr23:36199016-36199267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
569-822
               

               
Cow position:
               
chr23:21343523-21343273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
569-825
               

               
Cow position:
               
chr23:29242667-29242929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
569-830
               

               
Cow position:
               
chr23:20781545-20781803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
569-851
               

               
Cow position:
               
chr23:25358454-25358731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
571-835
               

               
Cow position:
               
chr23:1605403-1605668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
173, 152
               

               
Conread position:
               
572-774
               

               
Cow position:
               
chr23:8918128-8917923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 142
               

               
Conread position:
               
572-810
               

               
Cow position:
               
chr23:2316531-2316764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
572-850
               

               
Cow position:
               
chr23:33233180-33232907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
575-781
               

               
Cow position:
               
chr23:1878144-1877939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 160
               

               
Conread position:
               
577-824
               

               
Cow position:
               
chr23:3394759-3394515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
578-857
               

               
Cow position:
               
chr23:186902-187186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
580-773
               

               
Cow position:
               
chr23:1610585-1610781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
580-805
               

               
Cow position:
               
chr23:13555695-13555476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
580-814
               

               
Cow position:
               
chr23:21445856-21446090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
580-814
               

               
Cow position:
               
chr23:26948923-26949170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
580-814
               

               
Cow position:
               
chr23:29346026-29345790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
580-819
               

               
Cow position:
               
chr23:33711504-33711737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
580-891
               

               
Cow position:
               
chr23:9599233-9599535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
581-744
               

               
Cow position:
               
chr23:6359298-6359132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
581-850
               

               
Cow position:
               
chr23:3918364-3918095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 154
               

               
Conread position:
               
582-766
               

               
Cow position:
               
chr23:29742119-29742303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
582-786
               

               
Cow position:
               
chr23:38414222-38414023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
582-818
               

               
Cow position:
               
chr23:39775466-39775699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
162, 48
               

               
Conread position:
               
582-823
               

               
Cow position:
               
chr23:26795169-26794933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
149, 122
               

               
Conread position:
               
582-842
               

               
Cow position:
               
chr23:1690523-1690785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 167
               

               
Conread position:
               
582-891
               

               
Cow position:
               
chr23:16881422-16881122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
583-856
               

               
Cow position:
               
chr23:16583173-16582903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
154, 107
               

               
Conread position:
               
584-719
               

               
Cow position:
               
chr23:769854-769714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
584-807
               

               
Cow position:
               
chr23:12408774-12408546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
584-813
               

               
Cow position:
               
chr23:20195181-20194947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
103, 98
               

               
Conread position:
               
584-818
               

               
Cow position:
               
chr23:8293238-8293481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 143
               

               
Conread position:
               
585-813
               

               
Cow position:
               
chr23:5617317-5617547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
585-850
               

               
Cow position:
               
chr23:21452995-21452729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 151
               

               
Conread position:
               
587-835
               

               
Cow position:
               
chr23:29034053-29034309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 151
               

               
Conread position:
               
587-850
               

               
Cow position:
               
chr23:38208453-38208727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
588-825
               

               
Cow position:
               
chr23:15287393-15287157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 199
               

               
Conread position:
               
589-751
               

               
Cow position:
               
chr23:6172920-6172758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
155, 143
               

               
Conread position:
               
589-829
               

               
Cow position:
               
chr23:1991685-1991446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
156, 96
               

               
Conread position:
               
589-850
               

               
Cow position:
               
chr23:20057125-20056863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
113, 146
               

               
Conread position:
               
590-737
               

               
Cow position:
               
chr23:17092745-17092594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr23:1803537-1803767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
590-849
               

               
Cow position:
               
chr23:2259855-2259592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
590-856
               

               
Cow position:
               
chr23:32105617-32105877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
591-842
               

               
Cow position:
               
chr23:6244843-6244589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
592-746
               

               
Cow position:
               
chr23:39302460-39302617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
592-753
               

               
Cow position:
               
chr23:11315272-11315117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
152, 93
               

               
Conread position:
               
592-818
               

               
Cow position:
               
chr23:23884395-23884172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
152, 91
               

               
Conread position:
               
592-825
               

               
Cow position:
               
chr23:26632545-26632785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
592-850
               

               
Cow position:
               
chr23:38854989-38854734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
593-769
               

               
Cow position:
               
chr23:5395679-5395500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 145
               

               
Conread position:
               
593-778
               

               
Cow position:
               
chr23:7221268-7221077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
593-801
               

               
Cow position:
               
chr23:4810496-4810711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
593-810
               

               
Cow position:
               
chr23:19979202-19978984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
593-851
               

               
Cow position:
               
chr23:2282428-2282177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
596-802
               

               
Cow position:
               
chr23:33696026-33695814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 138
               

               
Conread position:
               
599-789
               

               
Cow position:
               
chr23:41348896-41348702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
599-821
               

               
Cow position:
               
chr23:18402534-18402310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
599-822
               

               
Cow position:
               
chr23:2055454-2055685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
601-787
               

               
Cow position:
               
chr23:6767646-6767831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
602-813
               

               
Cow position:
               
chr23:670375-670589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
604-754
               

               
Cow position:
               
chr23:5706756-5706907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
607-822
               

               
Cow position:
               
chr23:1885416-1885192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
610-789
               

               
Cow position:
               
chr23:3910243-3910061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
610-825
               

               
Cow position:
               
chr23:27544595-27544808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
127, 89
               

               
Conread position:
               
610-853
               

               
Cow position:
               
chr23:10868524-10868767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
610-858
               

               
Cow position:
               
chr23:29521232-29521481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
612-807
               

               
Cow position:
               
chr23:10416658-10416457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
612-810
               

               
Cow position:
               
chr23:25378421-25378621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
612-823
               

               
Cow position:
               
chr23:12050130-12050337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 172
               

               
Conread position:
               
613-827
               

               
Cow position:
               
chr23:5603505-5603303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
181, 73
               

               
Conread position:
               
613-835
               

               
Cow position:
               
chr23:11080847-11081067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
618-814
               

               
Cow position:
               
chr23:1068541-1068344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
623-814
               

               
Cow position:
               
chr23:18296580-18296779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
624-825
               

               
Cow position:
               
chr23:25189118-25189327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
635-827
               

               
Cow position:
               
chr23:4523191-4522994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
636-826
               

               
Cow position:
               
chr23:22399190-22399384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
638-835
               

               
Cow position:
               
chr23:1776840-1776643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
645-857
               

               
Cow position:
               
chr23:16631062-16631277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 177
               

               
Conread position:
               
649-850
               

               
Cow position:
               
chr23:38973648-38973851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
695-848
               

               
Cow position:
               
chr23:4329833-4329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.