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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_016468.5.5
        

               
Conread position:
               
371-768
               

               
Cow position:
               
chr29:12674661-12675064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 101
               

               
Conread position:
               
374-757
               

               
Cow position:
               
chr29:21475204-21475593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
378-592
               

               
Cow position:
               
chr29:18364881-18364667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
188, 18
               

               
Conread position:
               
378-688
               

               
Cow position:
               
chr29:22121903-22122217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
378-688
               

               
Cow position:
               
chr29:39332055-39331742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
378-749
               

               
Cow position:
               
chr29:21665502-21665869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
378-797
               

               
Cow position:
               
chr29:21933606-21933165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
378-808
               

               
Cow position:
               
chr29:26334858-26334427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
319, 10
               

               
Conread position:
               
378-810
               

               
Cow position:
               
chr29:11696061-11696493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
378-814
               

               
Cow position:
               
chr29:6925545-6925978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
380-700
               

               
Cow position:
               
chr29:16065471-16065791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
383-720
               

               
Cow position:
               
chr29:8296061-8296400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
385-575
               

               
Cow position:
               
chr29:2544058-2544248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
389-661
               

               
Cow position:
               
chr29:39108908-39108631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
389-700
               

               
Cow position:
               
chr29:15808511-15808826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
389-818
               

               
Cow position:
               
chr29:6218025-6217577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 296
               

               
Conread position:
               
390-814
               

               
Cow position:
               
chr29:17132081-17131652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
391-588
               

               
Cow position:
               
chr29:29770948-29770750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
391-643
               

               
Cow position:
               
chr29:27694168-27693918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
151, 87
               

               
Conread position:
               
391-779
               

               
Cow position:
               
chr29:26289548-26289158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
391-790
               

               
Cow position:
               
chr29:5948258-5947853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
393-575
               

               
Cow position:
               
chr29:23348686-23348504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
395-740
               

               
Cow position:
               
chr29:8588963-8588615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
395-741
               

               
Cow position:
               
chr29:45762654-45762313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
395-804
               

               
Cow position:
               
chr29:28883619-28884041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
396-690
               

               
Cow position:
               
chr29:15570310-15570607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
397-551
               

               
Cow position:
               
chr29:31594525-31594371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-556
               

               
Cow position:
               
chr29:18879124-18878965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-561
               

               
Cow position:
               
chr29:33599561-33599397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-561
               

               
Cow position:
               
chr29:40300423-40300259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-568
               

               
Cow position:
               
chr29:15698680-15698509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr29:2145363-2145188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-573
               

               
Cow position:
               
chr29:9137842-9138023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr29:6871497-6871314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr29:19338504-19338682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-577
               

               
Cow position:
               
chr29:10296963-10296783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-585
               

               
Cow position:
               
chr29:8667357-8667542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
397-588
               

               
Cow position:
               
chr29:14050669-14050478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
397-592
               

               
Cow position:
               
chr29:2984400-2984595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
397-593
               

               
Cow position:
               
chr29:7848168-7848366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
397-595
               

               
Cow position:
               
chr29:16042446-16042650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr29:15902746-15902541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr29:29565563-29565355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr29:35738960-35738752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
397-602
               

               
Cow position:
               
chr29:42709231-42709023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-603
               

               
Cow position:
               
chr29:1743276-1743485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-604
               

               
Cow position:
               
chr29:5952424-5952210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-616
               

               
Cow position:
               
chr29:45463008-45463224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
397-617
               

               
Cow position:
               
chr29:45627106-45627328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
397-620
               

               
Cow position:
               
chr29:13923855-13924081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
397-620
               

               
Cow position:
               
chr29:19891339-19891561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr29:13585981-13586208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr29:15936718-15936491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr29:18752010-18752238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr29:32378348-32378576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr29:39214073-39213845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr29:40157521-40157749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-623
               

               
Cow position:
               
chr29:16152354-16152582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-623
               

               
Cow position:
               
chr29:16185002-16184773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
397-623
               

               
Cow position:
               
chr29:28656597-28656369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-630
               

               
Cow position:
               
chr29:36428741-36428512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
397-661
               

               
Cow position:
               
chr29:10154810-10155070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
397-669
               

               
Cow position:
               
chr29:4084611-4084885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
397-670
               

               
Cow position:
               
chr29:37617699-37617970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 212
               

               
Conread position:
               
397-680
               

               
Cow position:
               
chr29:6774294-6774004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-684
               

               
Cow position:
               
chr29:457502-457213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 225
               

               
Conread position:
               
397-698
               

               
Cow position:
               
chr29:3663683-3663990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr29:10031876-10031570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr29:10145700-10145394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-702
               

               
Cow position:
               
chr29:19857234-19857547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-704
               

               
Cow position:
               
chr29:15755390-15755082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-707
               

               
Cow position:
               
chr29:15576514-15576202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
176, 310
               

               
Conread position:
               
397-727
               

               
Cow position:
               
chr29:30708004-30707672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr29:34865364-34865705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-731
               

               
Cow position:
               
chr29:43729614-43729953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
180, 120
               

               
Conread position:
               
397-733
               

               
Cow position:
               
chr29:39075659-39075316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 334
               

               
Conread position:
               
397-737
               

               
Cow position:
               
chr29:32942777-32943123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
397-737
               

               
Cow position:
               
chr29:34551996-34552343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 289
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:756859-756509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:1911867-1911515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:2401131-2401483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:2402463-2402814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:4620721-4621073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:5935736-5936087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:6414058-6414410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:6455422-6455774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:7953606-7953958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:10122560-10122209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:11118935-11118583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:11696992-11697344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:12898335-12898687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:13623597-13623245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:15251626-15251978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:15767849-15767497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:16785454-16785806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:17077782-17078136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
176, 150
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:18011348-18011700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:18300262-18300614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:18561253-18560901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:19925209-19924857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:20014511-20014159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:21209710-21210062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:21231305-21230951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:22341289-22341641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:24013278-24013630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:24982794-24982443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:26987108-26987460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:32298501-32298853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:32329483-32329131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-742
               

               
Cow position:
               
chr29:38271784-38272136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-749
               

               
Cow position:
               
chr29:3584580-3584221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
397-753
               

               
Cow position:
               
chr29:35434414-35434779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-754
               

               
Cow position:
               
chr29:23980504-23980868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-754
               

               
Cow position:
               
chr29:32516270-32516634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
175, 146
               

               
Conread position:
               
397-754
               

               
Cow position:
               
chr29:36007938-36008303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:2521123-2521494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 260
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:3330359-3330727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:16035621-16035251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:16067129-16067497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:38261714-38261344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:38672316-38671947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-757
               

               
Cow position:
               
chr29:39047877-39048244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:14569073-14569442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:14611022-14611391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:20593508-20593876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:26633747-26633378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:32555970-32555604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:35264591-35264223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
397-758
               

               
Cow position:
               
chr29:35735843-35735474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr29:292264-292634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-759
               

               
Cow position:
               
chr29:32353372-32353741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:734994-734628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
173, 310
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:2103618-2103991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 257
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:2837514-2837143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:3973002-3972642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 89
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:5550545-5550915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 133
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:13017846-13017472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:37618711-37619071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 225
               

               
Conread position:
               
397-760
               

               
Cow position:
               
chr29:43327572-43327938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
397-761
               

               
Cow position:
               
chr29:9717196-9717564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 220
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr29:5426077-5425702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr29:13128373-13127992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr29:15965777-15965398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr29:27702854-27703218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
173, 75
               

               
Conread position:
               
397-768
               

               
Cow position:
               
chr29:38409973-38410352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-772
               

               
Cow position:
               
chr29:727506-727886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-772
               

               
Cow position:
               
chr29:20055188-20055571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-773
               

               
Cow position:
               
chr29:1688511-1688898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-773
               

               
Cow position:
               
chr29:15401212-15400828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-775
               

               
Cow position:
               
chr29:686647-686261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 225
               

               
Conread position:
               
397-775
               

               
Cow position:
               
chr29:32732878-32733243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
397-779
               

               
Cow position:
               
chr29:24728524-24728132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
176, 289
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr29:606871-606479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
397-783
               

               
Cow position:
               
chr29:26263398-26263781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:43949-43548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:465855-465459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 366
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:1934016-1933615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:2188804-2188409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 91
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:2694478-2694877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:7956421-7956047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:19619492-19619095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:26285485-26285096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 193
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:34793793-34793392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 232
               

               
Conread position:
               
397-789
               

               
Cow position:
               
chr29:40337994-40337590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
397-790
               

               
Cow position:
               
chr29:9638768-9638378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 295
               

               
Conread position:
               
397-790
               

               
Cow position:
               
chr29:31185152-31185551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 159
               

               
Conread position:
               
397-791
               

               
Cow position:
               
chr29:42807757-42808149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
118, 80
               

               
Conread position:
               
397-797
               

               
Cow position:
               
chr29:15944116-15944521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 76
               

               
Conread position:
               
397-807
               

               
Cow position:
               
chr29:20429419-20429012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 63
               

               
Conread position:
               
397-810
               

               
Cow position:
               
chr29:24345921-24345488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 353
               

               
Conread position:
               
397-814
               

               
Cow position:
               
chr29:2136561-2136145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 302
               

               
Conread position:
               
397-814
               

               
Cow position:
               
chr29:13639809-13639404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 182
               

               
Conread position:
               
397-822
               

               
Cow position:
               
chr29:12005221-12004786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 226
               

               
Conread position:
               
397-822
               

               
Cow position:
               
chr29:32963080-32963533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 360
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr29:17668037-17668467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
76, 209
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr29:19428211-19428635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
397-825
               

               
Cow position:
               
chr29:22935831-22936248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 109
               

               
Conread position:
               
397-826
               

               
Cow position:
               
chr29:1324982-1325420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 228
               

               
Conread position:
               
397-827
               

               
Cow position:
               
chr29:2415263-2414833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 171
               

               
Conread position:
               
397-832
               

               
Cow position:
               
chr29:21227752-21228194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr29:8623459-8623022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 217
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr29:28696617-28696183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 122
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr29:35076907-35077344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 237
               

               
Conread position:
               
397-833
               

               
Cow position:
               
chr29:40498103-40497668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 310
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr29:6935260-6935706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 110
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr29:7811421-7810975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 412
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr29:10819938-10819494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 254
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr29:34780208-34779763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 58
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr29:36586121-36586565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 160
               

               
Conread position:
               
397-834
               

               
Cow position:
               
chr29:38229777-38230217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 229
               

               
Conread position:
               
397-848
               

               
Cow position:
               
chr29:11136343-11135900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 74
               

               
Conread position:
               
397-851
               

               
Cow position:
               
chr29:4120397-4120851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 111
               

               
Conread position:
               
397-853
               

               
Cow position:
               
chr29:87468-87012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 35
               

               
Conread position:
               
397-854
               

               
Cow position:
               
chr29:13590166-13589701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr29:5238262-5238726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 249
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr29:5241172-5241636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 249
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr29:20254940-20255404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 225
               

               
Conread position:
               
397-855
               

               
Cow position:
               
chr29:45208274-45208730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 163
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr29:9079027-9078570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr29:34746110-34745655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 225
               

               
Conread position:
               
397-856
               

               
Cow position:
               
chr29:38349584-38349123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 259
               

               
Conread position:
               
397-866
               

               
Cow position:
               
chr29:32292368-32292840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
175, 257
               

               
Conread position:
               
397-882
               

               
Cow position:
               
chr29:11684545-11685041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 306
               

               
Conread position:
               
398-572
               

               
Cow position:
               
chr29:4164582-4164757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
398-600
               

               
Cow position:
               
chr29:16012196-16011995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
398-610
               

               
Cow position:
               
chr29:8681405-8681191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 165
               

               
Conread position:
               
398-726
               

               
Cow position:
               
chr29:6771525-6771868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
398-789
               

               
Cow position:
               
chr29:7427363-7426966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 88
               

               
Conread position:
               
398-789
               

               
Cow position:
               
chr29:40014152-40013762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
398-791
               

               
Cow position:
               
chr29:12570983-12571385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
398-792
               

               
Cow position:
               
chr29:32808144-32808537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
398-826
               

               
Cow position:
               
chr29:4201664-4202101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 309
               

               
Conread position:
               
398-857
               

               
Cow position:
               
chr29:15738800-15738337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 238
               

               
Conread position:
               
398-857
               

               
Cow position:
               
chr29:27833533-27833992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
399-606
               

               
Cow position:
               
chr29:5963244-5963468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
399-739
               

               
Cow position:
               
chr29:20710540-20710900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 148
               

               
Conread position:
               
399-825
               

               
Cow position:
               
chr29:26161051-26160620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 411
               

               
Conread position:
               
400-769
               

               
Cow position:
               
chr29:19755993-19756366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 309
               

               
Conread position:
               
400-831
               

               
Cow position:
               
chr29:26979949-26980383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
401-712
               

               
Cow position:
               
chr29:8427055-8426753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
401-782
               

               
Cow position:
               
chr29:26997620-26997993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
196, 165
               

               
Conread position:
               
403-677
               

               
Cow position:
               
chr29:13652837-13653117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
403-755
               

               
Cow position:
               
chr29:7866010-7865653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
403-756
               

               
Cow position:
               
chr29:903483-903843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
174, 17
               

               
Conread position:
               
403-768
               

               
Cow position:
               
chr29:12309549-12309910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 97
               

               
Conread position:
               
403-831
               

               
Cow position:
               
chr29:13553691-13554118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
403-848
               

               
Cow position:
               
chr29:21443796-21443344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 412
               

               
Conread position:
               
404-539
               

               
Cow position:
               
chr29:14207756-14207622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
404-564
               

               
Cow position:
               
chr29:6648817-6648976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
404-572
               

               
Cow position:
               
chr29:21168063-21168230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
404-573
               

               
Cow position:
               
chr29:18012150-18012319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr29:4001969-4002140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr29:11433496-11433666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr29:13458546-13458716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr29:24730725-24730562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
404-579
               

               
Cow position:
               
chr29:4692266-4692087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
404-579
               

               
Cow position:
               
chr29:43517172-43516997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-588
               

               
Cow position:
               
chr29:11309163-11308976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
404-590
               

               
Cow position:
               
chr29:3539705-3539517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
404-592
               

               
Cow position:
               
chr29:2623963-2623772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
404-597
               

               
Cow position:
               
chr29:16187239-16187427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
404-599
               

               
Cow position:
               
chr29:34774312-34774114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
404-605
               

               
Cow position:
               
chr29:3549316-3549518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
404-605
               

               
Cow position:
               
chr29:16185884-16185680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-614
               

               
Cow position:
               
chr29:3574815-3574603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-617
               

               
Cow position:
               
chr29:4519517-4519734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
404-622
               

               
Cow position:
               
chr29:527053-526832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-622
               

               
Cow position:
               
chr29:9641705-9641926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-623
               

               
Cow position:
               
chr29:31765824-31766046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-625
               

               
Cow position:
               
chr29:10819113-10818890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
404-627
               

               
Cow position:
               
chr29:14372729-14372497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
404-642
               

               
Cow position:
               
chr29:43009561-43009318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
404-656
               

               
Cow position:
               
chr29:12875949-12876205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
404-666
               

               
Cow position:
               
chr29:5187232-5186971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 10
               

               
Conread position:
               
404-681
               

               
Cow position:
               
chr29:31943396-31943660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
404-684
               

               
Cow position:
               
chr29:33520437-33520156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
404-689
               

               
Cow position:
               
chr29:28100139-28100419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
171, 227
               

               
Conread position:
               
404-691
               

               
Cow position:
               
chr29:24669492-24669788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
404-696
               

               
Cow position:
               
chr29:10674567-10674859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
404-697
               

               
Cow position:
               
chr29:25423388-25423671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
404-699
               

               
Cow position:
               
chr29:29302480-29302177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr29:6150516-6150222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 177
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr29:10225480-10225182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 178
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr29:34806051-34805761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
231, 173
               

               
Conread position:
               
404-708
               

               
Cow position:
               
chr29:34734629-34734325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
404-712
               

               
Cow position:
               
chr29:4537611-4537928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
404-712
               

               
Cow position:
               
chr29:16168485-16168176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
404-717
               

               
Cow position:
               
chr29:14116595-14116910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
172, 150
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr29:15116745-15116409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 252
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr29:19596705-19596371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 228
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr29:28578924-28579258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-731
               

               
Cow position:
               
chr29:28621721-28621395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr29:16612407-16612069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
77, 222
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr29:18085126-18085475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
404-735
               

               
Cow position:
               
chr29:18025971-18026295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr29:133735-134083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr29:649814-650164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr29:1956539-1956199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
404-736
               

               
Cow position:
               
chr29:23988344-23988698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr29:37719457-37719796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 224
               

               
Conread position:
               
404-740
               

               
Cow position:
               
chr29:629187-629521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
168, 83
               

               
Conread position:
               
404-740
               

               
Cow position:
               
chr29:4875354-4875004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 345
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr29:9861316-9860973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr29:10154241-10153898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr29:11321797-11321458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr29:37451862-37452197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
300, 58
               

               
Conread position:
               
404-744
               

               
Cow position:
               
chr29:20244840-20245181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
173, 54
               

               
Conread position:
               
404-745
               

               
Cow position:
               
chr29:44607622-44607282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
404-748
               

               
Cow position:
               
chr29:11703574-11703926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-752
               

               
Cow position:
               
chr29:29620082-29619731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
404-753
               

               
Cow position:
               
chr29:36242888-36243247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
404-753
               

               
Cow position:
               
chr29:42939788-42939451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
404-754
               

               
Cow position:
               
chr29:27928113-27927755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-756
               

               
Cow position:
               
chr29:10452024-10451654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 311
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr29:1479234-1479596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr29:4611144-4611506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr29:6879146-6878788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
404-758
               

               
Cow position:
               
chr29:16109909-16110271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-759
               

               
Cow position:
               
chr29:19524357-19523994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr29:7799363-7799726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr29:13101692-13102047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
258, 209
               

               
Conread position:
               
404-760
               

               
Cow position:
               
chr29:16347994-16348355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 73
               

               
Conread position:
               
404-762
               

               
Cow position:
               
chr29:16501436-16501796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 222
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr29:20213344-20213716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr29:24121307-24120937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr29:31093778-31093408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-772
               

               
Cow position:
               
chr29:22949118-22948738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 225
               

               
Conread position:
               
404-773
               

               
Cow position:
               
chr29:8415473-8415863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr29:6261762-6261390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr29:25927003-25926618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 250
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr29:38910457-38910068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
404-781
               

               
Cow position:
               
chr29:44009266-44008885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr29:961474-961863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 117
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr29:1613025-1612636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
404-789
               

               
Cow position:
               
chr29:13616103-13615698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
404-790
               

               
Cow position:
               
chr29:16382405-16382797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
404-794
               

               
Cow position:
               
chr29:32644460-32644868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 208
               

               
Conread position:
               
404-803
               

               
Cow position:
               
chr29:11365798-11366192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 183
               

               
Conread position:
               
404-807
               

               
Cow position:
               
chr29:19792715-19792313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 47
               

               
Conread position:
               
404-807
               

               
Cow position:
               
chr29:40096516-40096923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 213
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr29:7666478-7666066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
404-810
               

               
Cow position:
               
chr29:27007671-27008079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
404-813
               

               
Cow position:
               
chr29:4327047-4327458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 43
               

               
Conread position:
               
404-814
               

               
Cow position:
               
chr29:29056729-29057146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
404-822
               

               
Cow position:
               
chr29:45650777-45650368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
404-824
               

               
Cow position:
               
chr29:27858360-27858770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 177
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr29:32290154-32290585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 11
               

               
Conread position:
               
404-825
               

               
Cow position:
               
chr29:39567240-39567662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 19
               

               
Conread position:
               
404-826
               

               
Cow position:
               
chr29:12901548-12901127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
179, 57
               

               
Conread position:
               
404-827
               

               
Cow position:
               
chr29:43495621-43496026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 133
               

               
Conread position:
               
404-833
               

               
Cow position:
               
chr29:13107890-13108317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
404-833
               

               
Cow position:
               
chr29:16097762-16097335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 159
               

               
Conread position:
               
404-835
               

               
Cow position:
               
chr29:19761826-19762256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 334
               

               
Conread position:
               
404-835
               

               
Cow position:
               
chr29:41812023-41811601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 215
               

               
Conread position:
               
404-839
               

               
Cow position:
               
chr29:18072479-18072926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 190
               

               
Conread position:
               
404-839
               

               
Cow position:
               
chr29:40764118-40763687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
404-847
               

               
Cow position:
               
chr29:16609291-16609741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr29:26778442-26778877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
404-848
               

               
Cow position:
               
chr29:36530415-36530861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr29:17408883-17409331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 204
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr29:32800152-32799709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr29:36216672-36217111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
404-850
               

               
Cow position:
               
chr29:45006065-45005631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 217
               

               
Conread position:
               
404-851
               

               
Cow position:
               
chr29:17541-17110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 72
               

               
Conread position:
               
404-854
               

               
Cow position:
               
chr29:6775434-6774987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
169, 136
               

               
Conread position:
               
404-856
               

               
Cow position:
               
chr29:44902151-44901702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 244
               

               
Conread position:
               
405-561
               

               
Cow position:
               
chr29:17117484-17117640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-589
               

               
Cow position:
               
chr29:12222126-12221945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 135
               

               
Conread position:
               
405-597
               

               
Cow position:
               
chr29:25837167-25836974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
405-659
               

               
Cow position:
               
chr29:36209481-36209732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
405-660
               

               
Cow position:
               
chr29:7664215-7663943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
405-668
               

               
Cow position:
               
chr29:23240067-23240330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
405-748
               

               
Cow position:
               
chr29:43499915-43499569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
172, 221
               

               
Conread position:
               
405-757
               

               
Cow position:
               
chr29:5786480-5786837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
405-759
               

               
Cow position:
               
chr29:24659548-24659188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
221, 193
               

               
Conread position:
               
405-788
               

               
Cow position:
               
chr29:26130346-26130721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 40
               

               
Conread position:
               
405-833
               

               
Cow position:
               
chr29:528737-528304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
405-833
               

               
Cow position:
               
chr29:19514554-19514129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 249
               

               
Conread position:
               
405-850
               

               
Cow position:
               
chr29:732178-732617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 178
               

               
Conread position:
               
406-573
               

               
Cow position:
               
chr29:3501945-3502114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
406-592
               

               
Cow position:
               
chr29:13027989-13028175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
406-677
               

               
Cow position:
               
chr29:27588245-27588512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
406-742
               

               
Cow position:
               
chr29:29065980-29066317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 153
               

               
Conread position:
               
406-757
               

               
Cow position:
               
chr29:32317648-32318002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 119
               

               
Conread position:
               
406-766
               

               
Cow position:
               
chr29:18749028-18748665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 212
               

               
Conread position:
               
406-798
               

               
Cow position:
               
chr29:10156733-10156357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
406-853
               

               
Cow position:
               
chr29:2744718-2744268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 26
               

               
Conread position:
               
407-725
               

               
Cow position:
               
chr29:9332698-9333019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 301
               

               
Conread position:
               
407-814
               

               
Cow position:
               
chr29:24952235-24952655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
407-828
               

               
Cow position:
               
chr29:25775494-25775057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 252
               

               
Conread position:
               
407-835
               

               
Cow position:
               
chr29:28506648-28507092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 112
               

               
Conread position:
               
407-841
               

               
Cow position:
               
chr29:42821340-42821789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 144
               

               
Conread position:
               
408-590
               

               
Cow position:
               
chr29:984419-984601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-593
               

               
Cow position:
               
chr29:26415564-26415757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
408-662
               

               
Cow position:
               
chr29:30193566-30193305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
408-706
               

               
Cow position:
               
chr29:9511425-9511120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 265
               

               
Conread position:
               
408-731
               

               
Cow position:
               
chr29:18104504-18104172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 264
               

               
Conread position:
               
408-732
               

               
Cow position:
               
chr29:13041004-13040670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
408-732
               

               
Cow position:
               
chr29:30106072-30105741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 220
               

               
Conread position:
               
408-735
               

               
Cow position:
               
chr29:7959975-7959630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 234
               

               
Conread position:
               
408-749
               

               
Cow position:
               
chr29:22339671-22339313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
409-598
               

               
Cow position:
               
chr29:6333103-6333293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
409-600
               

               
Cow position:
               
chr29:6334342-6334534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
409-643
               

               
Cow position:
               
chr29:41113289-41113049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
409-728
               

               
Cow position:
               
chr29:16939559-16939887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
409-735
               

               
Cow position:
               
chr29:27835777-27836102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
409-736
               

               
Cow position:
               
chr29:38247195-38246857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 219
               

               
Conread position:
               
409-767
               

               
Cow position:
               
chr29:34535674-34535306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
409-789
               

               
Cow position:
               
chr29:13848379-13848011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
227, 106
               

               
Conread position:
               
409-810
               

               
Cow position:
               
chr29:15941088-15940671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 338
               

               
Conread position:
               
409-857
               

               
Cow position:
               
chr29:20933262-20933715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 133
               

               
Conread position:
               
410-741
               

               
Cow position:
               
chr29:45820684-45820372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
411-573
               

               
Cow position:
               
chr29:11915092-11915254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
411-575
               

               
Cow position:
               
chr29:23112919-23113082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
411-711
               

               
Cow position:
               
chr29:21592261-21592560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
129, 247
               

               
Conread position:
               
411-745
               

               
Cow position:
               
chr29:4058062-4058411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
411-810
               

               
Cow position:
               
chr29:29477470-29477071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
411-821
               

               
Cow position:
               
chr29:21197093-21196677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 212
               

               
Conread position:
               
411-850
               

               
Cow position:
               
chr29:35291656-35292088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 268
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr29:6755528-6755368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
412-699
               

               
Cow position:
               
chr29:9864297-9864594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 223
               

               
Conread position:
               
412-730
               

               
Cow position:
               
chr29:44233384-44233070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 89
               

               
Conread position:
               
412-742
               

               
Cow position:
               
chr29:23449042-23448697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
412-789
               

               
Cow position:
               
chr29:32543909-32544294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 205
               

               
Conread position:
               
412-835
               

               
Cow position:
               
chr29:45583246-45582837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
413-715
               

               
Cow position:
               
chr29:43692517-43692820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
164, 280
               

               
Conread position:
               
414-756
               

               
Cow position:
               
chr29:2308841-2309184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 198
               

               
Conread position:
               
414-768
               

               
Cow position:
               
chr29:406703-406342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 239
               

               
Conread position:
               
415-625
               

               
Cow position:
               
chr29:5109718-5109505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
415-722
               

               
Cow position:
               
chr29:27005447-27005757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
153, 207
               

               
Conread position:
               
415-732
               

               
Cow position:
               
chr29:8190917-8190580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
161, 309
               

               
Conread position:
               
415-760
               

               
Cow position:
               
chr29:7560839-7560486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
415-834
               

               
Cow position:
               
chr29:17794982-17795413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
415-858
               

               
Cow position:
               
chr29:4524422-4524860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
118, 133
               

               
Conread position:
               
416-789
               

               
Cow position:
               
chr29:16209585-16209205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 20
               

               
Conread position:
               
417-736
               

               
Cow position:
               
chr29:11798719-11799049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 290
               

               
Conread position:
               
420-789
               

               
Cow position:
               
chr29:19659622-19659986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
157, 192
               

               
Conread position:
               
420-854
               

               
Cow position:
               
chr29:19398750-19399194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 234
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr29:29929365-29929519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-575
               

               
Cow position:
               
chr29:41183169-41183017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-598
               

               
Cow position:
               
chr29:34298178-34298003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-657
               

               
Cow position:
               
chr29:27872978-27873215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
423-742
               

               
Cow position:
               
chr29:9977491-9977165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
423-768
               

               
Cow position:
               
chr29:36633264-36632924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
148, 199
               

               
Conread position:
               
423-768
               

               
Cow position:
               
chr29:42253941-42253588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
423-773
               

               
Cow position:
               
chr29:17109542-17109891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 129
               

               
Conread position:
               
423-805
               

               
Cow position:
               
chr29:25088304-25088708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 354
               

               
Conread position:
               
423-808
               

               
Cow position:
               
chr29:21528875-21529246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 49
               

               
Conread position:
               
423-823
               

               
Cow position:
               
chr29:28775884-28775485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 138
               

               
Conread position:
               
423-828
               

               
Cow position:
               
chr29:8935055-8935468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 231
               

               
Conread position:
               
423-848
               

               
Cow position:
               
chr29:17606986-17607412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 314
               

               
Conread position:
               
423-876
               

               
Cow position:
               
chr29:28113691-28113250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
423-879
               

               
Cow position:
               
chr29:4649149-4648682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
424-764
               

               
Cow position:
               
chr29:10846585-10846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
278, 100
               

               
Conread position:
               
424-789
               

               
Cow position:
               
chr29:28990516-28990883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 230
               

               
Conread position:
               
424-807
               

               
Cow position:
               
chr29:24623814-24624206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 58
               

               
Conread position:
               
424-858
               

               
Cow position:
               
chr29:4480603-4480164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 200
               

               
Conread position:
               
425-598
               

               
Cow position:
               
chr29:21428011-21427835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-609
               

               
Cow position:
               
chr29:40306428-40306241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr29:2483670-2483346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr29:13876616-13876292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-742
               

               
Cow position:
               
chr29:24616205-24616529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-767
               

               
Cow position:
               
chr29:32308750-32308405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
425-768
               

               
Cow position:
               
chr29:18724183-18723833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
425-838
               

               
Cow position:
               
chr29:26994837-26995253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
147, 163
               

               
Conread position:
               
425-857
               

               
Cow position:
               
chr29:35406213-35405786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 134
               

               
Conread position:
               
425-866
               

               
Cow position:
               
chr29:26450059-26449609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
426-688
               

               
Cow position:
               
chr29:8414809-8414546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
426-759
               

               
Cow position:
               
chr29:12189564-12189226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
147, 200
               

               
Conread position:
               
426-819
               

               
Cow position:
               
chr29:6635677-6636071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 266
               

               
Conread position:
               
427-605
               

               
Cow position:
               
chr29:26915753-26915934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
427-622
               

               
Cow position:
               
chr29:13903466-13903268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
427-829
               

               
Cow position:
               
chr29:23119800-23119394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
427-850
               

               
Cow position:
               
chr29:35281077-35281494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 195
               

               
Conread position:
               
428-602
               

               
Cow position:
               
chr29:4218237-4218417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
429-731
               

               
Cow position:
               
chr29:3460397-3460703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
432-721
               

               
Cow position:
               
chr29:24260257-24259966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
432-742
               

               
Cow position:
               
chr29:35455390-35455073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
432-742
               

               
Cow position:
               
chr29:42413746-42414063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
432-789
               

               
Cow position:
               
chr29:2463130-2462775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
193, 145
               

               
Conread position:
               
432-853
               

               
Cow position:
               
chr29:28689189-28689613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 275
               

               
Conread position:
               
432-856
               

               
Cow position:
               
chr29:26017931-26017502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
433-605
               

               
Cow position:
               
chr29:37485971-37486146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
433-742
               

               
Cow position:
               
chr29:2484875-2485191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
433-827
               

               
Cow position:
               
chr29:31786258-31786649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 243
               

               
Conread position:
               
433-866
               

               
Cow position:
               
chr29:5138813-5139254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
434-814
               

               
Cow position:
               
chr29:11072113-11071731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
435-835
               

               
Cow position:
               
chr29:17543031-17543433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
436-742
               

               
Cow position:
               
chr29:12610912-12611225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
438-736
               

               
Cow position:
               
chr29:18963322-18963629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 214
               

               
Conread position:
               
439-831
               

               
Cow position:
               
chr29:17041236-17041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
213, 175
               

               
Conread position:
               
439-835
               

               
Cow position:
               
chr29:8126008-8125603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 186
               

               
Conread position:
               
444-810
               

               
Cow position:
               
chr29:42406258-42406635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
445-830
               

               
Cow position:
               
chr29:29550914-29551298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
446-760
               

               
Cow position:
               
chr29:18773011-18772684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
446-760
               

               
Cow position:
               
chr29:24420549-24420234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 221
               

               
Conread position:
               
447-742
               

               
Cow position:
               
chr29:23763509-23763207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
447-742
               

               
Cow position:
               
chr29:32582092-32581786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
448-622
               

               
Cow position:
               
chr29:13853660-13853837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
449-760
               

               
Cow position:
               
chr29:28637463-28637152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
228, 29
               

               
Conread position:
               
449-833
               

               
Cow position:
               
chr29:10643299-10642909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
128, 205
               

               
Conread position:
               
452-793
               

               
Cow position:
               
chr29:20674209-20673855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
455-754
               

               
Cow position:
               
chr29:10267535-10267233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
455-825
               

               
Cow position:
               
chr29:18212374-18212018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
455-850
               

               
Cow position:
               
chr29:35502044-35501658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 165
               

               
Conread position:
               
457-741
               

               
Cow position:
               
chr29:40894546-40894824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
458-747
               

               
Cow position:
               
chr29:29632332-29632036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
458-778
               

               
Cow position:
               
chr29:29589309-29588983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 91
               

               
Conread position:
               
459-759
               

               
Cow position:
               
chr29:40618130-40617814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
110, 195
               

               
Conread position:
               
462-707
               

               
Cow position:
               
chr29:20308079-20308327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
117, 192
               

               
Conread position:
               
462-742
               

               
Cow position:
               
chr29:19386029-19386316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
468-853
               

               
Cow position:
               
chr29:1307248-1306859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 59
               

               
Conread position:
               
469-693
               

               
Cow position:
               
chr29:15289361-15289583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
469-856
               

               
Cow position:
               
chr29:856788-856406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 149
               

               
Conread position:
               
472-724
               

               
Cow position:
               
chr29:10200540-10200800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
476-835
               

               
Cow position:
               
chr29:10838564-10838940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
477-677
               

               
Cow position:
               
chr29:13127483-13127281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
477-702
               

               
Cow position:
               
chr29:40621308-40621079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
477-730
               

               
Cow position:
               
chr29:36193044-36192788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
477-736
               

               
Cow position:
               
chr29:34610087-34609834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
477-742
               

               
Cow position:
               
chr29:2534292-2534564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
477-750
               

               
Cow position:
               
chr29:16082742-16083030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 156
               

               
Conread position:
               
477-804
               

               
Cow position:
               
chr29:35484869-35485205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
477-827
               

               
Cow position:
               
chr29:4367361-4367704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
276, 96
               

               
Conread position:
               
477-850
               

               
Cow position:
               
chr29:9911786-9912172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 216
               

               
Conread position:
               
477-857
               

               
Cow position:
               
chr29:3704574-3704195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 52
               

               
Conread position:
               
477-857
               

               
Cow position:
               
chr29:35459135-35458768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 120
               

               
Conread position:
               
478-621
               

               
Cow position:
               
chr29:32349684-32349538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
478-622
               

               
Cow position:
               
chr29:2374378-2374231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
478-625
               

               
Cow position:
               
chr29:14500698-14500847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
478-680
               

               
Cow position:
               
chr29:28665426-28665629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
478-732
               

               
Cow position:
               
chr29:32870862-32871124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
478-737
               

               
Cow position:
               
chr29:26346262-26346529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
478-742
               

               
Cow position:
               
chr29:15855417-15855685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 154
               

               
Conread position:
               
478-742
               

               
Cow position:
               
chr29:25824573-25824843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
478-742
               

               
Cow position:
               
chr29:30433306-30433575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
478-768
               

               
Cow position:
               
chr29:14888746-14889043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
478-768
               

               
Cow position:
               
chr29:24304199-24304498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
478-768
               

               
Cow position:
               
chr29:24305093-24304794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
478-773
               

               
Cow position:
               
chr29:37268107-37267804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
95, 176
               

               
Conread position:
               
478-774
               

               
Cow position:
               
chr29:19124985-19125267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 143
               

               
Conread position:
               
478-789
               

               
Cow position:
               
chr29:25695688-25695372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
99, 262
               

               
Conread position:
               
478-790
               

               
Cow position:
               
chr29:26519834-26519521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr29:31926666-31926322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
478-823
               

               
Cow position:
               
chr29:28197383-28197032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
100, 263
               

               
Conread position:
               
478-825
               

               
Cow position:
               
chr29:42771291-42771623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
478-827
               

               
Cow position:
               
chr29:28868256-28868616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 264
               

               
Conread position:
               
478-831
               

               
Cow position:
               
chr29:26335752-26335394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
478-838
               

               
Cow position:
               
chr29:3282322-3282681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
101, 176
               

               
Conread position:
               
478-849
               

               
Cow position:
               
chr29:10652965-10653337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
478-849
               

               
Cow position:
               
chr29:40656313-40656698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 339
               

               
Conread position:
               
478-850
               

               
Cow position:
               
chr29:43328263-43328640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
478-853
               

               
Cow position:
               
chr29:26771051-26771437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 160
               

               
Conread position:
               
478-893
               

               
Cow position:
               
chr29:26616111-26615682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 352
               

               
Conread position:
               
479-699
               

               
Cow position:
               
chr29:8110232-8110014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
156, 97
               

               
Conread position:
               
479-728
               

               
Cow position:
               
chr29:6014718-6014979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
38, 187
               

               
Conread position:
               
479-736
               

               
Cow position:
               
chr29:2715763-2716022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 217
               

               
Conread position:
               
479-766
               

               
Cow position:
               
chr29:15828596-15828305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 155
               

               
Conread position:
               
479-813
               

               
Cow position:
               
chr29:28195893-28195547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 264
               

               
Conread position:
               
479-848
               

               
Cow position:
               
chr29:40117197-40117566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
480-759
               

               
Cow position:
               
chr29:16694051-16694327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
481-733
               

               
Cow position:
               
chr29:4221014-4221264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
482-757
               

               
Cow position:
               
chr29:21237089-21237371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
482-825
               

               
Cow position:
               
chr29:2071939-2071596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 140
               

               
Conread position:
               
483-751
               

               
Cow position:
               
chr29:21619816-21619539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 173
               

               
Conread position:
               
483-754
               

               
Cow position:
               
chr29:11636844-11636568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
218, 0
               

               
Conread position:
               
483-758
               

               
Cow position:
               
chr29:18781496-18781774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
487-702
               

               
Cow position:
               
chr29:11334862-11334645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 211
               

               
Conread position:
               
487-702
               

               
Cow position:
               
chr29:34530071-34530292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
487-789
               

               
Cow position:
               
chr29:38581603-38581915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
487-856
               

               
Cow position:
               
chr29:20462983-20462618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
89, 248
               

               
Conread position:
               
488-621
               

               
Cow position:
               
chr29:561467-561603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
488-736
               

               
Cow position:
               
chr29:24945350-24945095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-742
               

               
Cow position:
               
chr29:34293534-34293273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
488-751
               

               
Cow position:
               
chr29:40330407-40330677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
488-768
               

               
Cow position:
               
chr29:35075588-35075300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
488-776
               

               
Cow position:
               
chr29:43080973-43080689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
490-623
               

               
Cow position:
               
chr29:6194352-6194216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
490-623
               

               
Cow position:
               
chr29:8493147-8493012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
491-801
               

               
Cow position:
               
chr29:37785548-37785220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 314
               

               
Conread position:
               
493-642
               

               
Cow position:
               
chr29:28503733-28503884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
493-763
               

               
Cow position:
               
chr29:13403305-13403581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
493-804
               

               
Cow position:
               
chr29:16175631-16175314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 156
               

               
Conread position:
               
493-810
               

               
Cow position:
               
chr29:7041193-7040881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
493-817
               

               
Cow position:
               
chr29:11398287-11397954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
83, 139
               

               
Conread position:
               
493-828
               

               
Cow position:
               
chr29:45624620-45624285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 49
               

               
Conread position:
               
493-838
               

               
Cow position:
               
chr29:26290941-26290595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 246
               

               
Conread position:
               
494-622
               

               
Cow position:
               
chr29:15257857-15257988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
495-850
               

               
Cow position:
               
chr29:23874099-23874456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 71
               

               
Conread position:
               
496-836
               

               
Cow position:
               
chr29:29974688-29975025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
498-676
               

               
Cow position:
               
chr29:23703197-23703017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
498-810
               

               
Cow position:
               
chr29:12798577-12798882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
498-850
               

               
Cow position:
               
chr29:5892495-5892841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 121
               

               
Conread position:
               
500-760
               

               
Cow position:
               
chr29:30028784-30028516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
500-820
               

               
Cow position:
               
chr29:6293817-6293501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 119
               

               
Conread position:
               
501-742
               

               
Cow position:
               
chr29:39425133-39425381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
505-736
               

               
Cow position:
               
chr29:18338893-18338656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
505-757
               

               
Cow position:
               
chr29:28047539-28047278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 149
               

               
Conread position:
               
505-760
               

               
Cow position:
               
chr29:37470922-37470654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
505-779
               

               
Cow position:
               
chr29:40903067-40902793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
505-806
               

               
Cow position:
               
chr29:5977469-5977154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
506-677
               

               
Cow position:
               
chr29:26415754-26415928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
506-677
               

               
Cow position:
               
chr29:27825900-27826072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
506-708
               

               
Cow position:
               
chr29:8968772-8968975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
506-737
               

               
Cow position:
               
chr29:23541609-23541371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr29:25958046-25957777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
507-781
               

               
Cow position:
               
chr29:42848884-42849154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
508-673
               

               
Cow position:
               
chr29:31899365-31899200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
508-742
               

               
Cow position:
               
chr29:21640068-21639826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 146
               

               
Conread position:
               
508-825
               

               
Cow position:
               
chr29:40583452-40583769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 184
               

               
Conread position:
               
509-825
               

               
Cow position:
               
chr29:9686353-9686023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 180
               

               
Conread position:
               
510-736
               

               
Cow position:
               
chr29:16057150-16056913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 213
               

               
Conread position:
               
510-760
               

               
Cow position:
               
chr29:5897072-5896814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
510-768
               

               
Cow position:
               
chr29:35300385-35300651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 144
               

               
Conread position:
               
511-673
               

               
Cow position:
               
chr29:41347209-41347370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
512-759
               

               
Cow position:
               
chr29:17773600-17773855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
512-806
               

               
Cow position:
               
chr29:37292432-37292738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
512-814
               

               
Cow position:
               
chr29:35630754-35630443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
513-752
               

               
Cow position:
               
chr29:36356514-36356749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
513-817
               

               
Cow position:
               
chr29:20626237-20626546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 104
               

               
Conread position:
               
516-850
               

               
Cow position:
               
chr29:10058864-10058539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
519-729
               

               
Cow position:
               
chr29:1582959-1582744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
519-735
               

               
Cow position:
               
chr29:7408224-7408000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
519-757
               

               
Cow position:
               
chr29:30695998-30695754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
519-789
               

               
Cow position:
               
chr29:9709365-9709634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
521-729
               

               
Cow position:
               
chr29:29121565-29121358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
521-818
               

               
Cow position:
               
chr29:36037380-36037671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
524-830
               

               
Cow position:
               
chr29:19907031-19907335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
170, 51
               

               
Conread position:
               
526-752
               

               
Cow position:
               
chr29:26559844-26559625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
527-742
               

               
Cow position:
               
chr29:27976568-27976347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
527-807
               

               
Cow position:
               
chr29:20178456-20178173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
527-835
               

               
Cow position:
               
chr29:28273711-28273402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
527-866
               

               
Cow position:
               
chr29:18603873-18603531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
529-742
               

               
Cow position:
               
chr29:1445700-1445920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
529-821
               

               
Cow position:
               
chr29:14037037-14036746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 210
               

               
Conread position:
               
530-789
               

               
Cow position:
               
chr29:14207345-14207078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
530-825
               

               
Cow position:
               
chr29:16657368-16657670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
533-739
               

               
Cow position:
               
chr29:13391189-13390976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
533-742
               

               
Cow position:
               
chr29:3782804-3782588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
533-802
               

               
Cow position:
               
chr29:13372346-13372620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
533-824
               

               
Cow position:
               
chr29:32521543-32521849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
535-851
               

               
Cow position:
               
chr29:2984577-2984888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
536-753
               

               
Cow position:
               
chr29:4328117-4328327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
537-742
               

               
Cow position:
               
chr29:2490577-2490789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
537-850
               

               
Cow position:
               
chr29:26734715-26735025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
538-742
               

               
Cow position:
               
chr29:22021100-22020889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
538-758
               

               
Cow position:
               
chr29:21478629-21478401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
538-839
               

               
Cow position:
               
chr29:8164177-8163865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
542-781
               

               
Cow position:
               
chr29:10456863-10456628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
545-789
               

               
Cow position:
               
chr29:24650673-24650421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
545-827
               

               
Cow position:
               
chr29:28128783-28128499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
547-856
               

               
Cow position:
               
chr29:4625299-4624994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
548-786
               

               
Cow position:
               
chr29:44310333-44310090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
548-832
               

               
Cow position:
               
chr29:2644613-2644321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
548-856
               

               
Cow position:
               
chr29:14112070-14112381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 192
               

               
Conread position:
               
550-737
               

               
Cow position:
               
chr29:22720828-22721017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
551-750
               

               
Cow position:
               
chr29:38760453-38760257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
555-767
               

               
Cow position:
               
chr29:43252985-43252769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
557-810
               

               
Cow position:
               
chr29:21000346-21000606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
557-856
               

               
Cow position:
               
chr29:22069038-22068738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
189, 10
               

               
Conread position:
               
558-766
               

               
Cow position:
               
chr29:23135187-23134971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
559-789
               

               
Cow position:
               
chr29:1709625-1709857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
562-857
               

               
Cow position:
               
chr29:14501306-14501596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
563-825
               

               
Cow position:
               
chr29:3395823-3396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 120
               

               
Conread position:
               
565-756
               

               
Cow position:
               
chr29:5046560-5046371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
565-808
               

               
Cow position:
               
chr29:5919613-5919361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
566-810
               

               
Cow position:
               
chr29:9139125-9139376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
135, 14
               

               
Conread position:
               
566-848
               

               
Cow position:
               
chr29:39111592-39111317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
178, 95
               

               
Conread position:
               
568-828
               

               
Cow position:
               
chr29:42268410-42268676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
569-727
               

               
Cow position:
               
chr29:10296724-10296562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
569-768
               

               
Cow position:
               
chr29:34360075-34359884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
175, 77
               

               
Conread position:
               
569-781
               

               
Cow position:
               
chr29:37961253-37961046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
569-810
               

               
Cow position:
               
chr29:477827-478067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
569-822
               

               
Cow position:
               
chr29:2522298-2522542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
570-848
               

               
Cow position:
               
chr29:35636144-35636426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
571-688
               

               
Cow position:
               
chr29:43516957-43516843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
571-732
               

               
Cow position:
               
chr29:45588754-45588591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
571-891
               

               
Cow position:
               
chr29:40165961-40166280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 169
               

               
Conread position:
               
572-783
               

               
Cow position:
               
chr29:17135573-17135779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
572-797
               

               
Cow position:
               
chr29:5062854-5063076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
572-810
               

               
Cow position:
               
chr29:6844907-6844666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
572-823
               

               
Cow position:
               
chr29:750176-749934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
572-856
               

               
Cow position:
               
chr29:14097410-14097113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
576-853
               

               
Cow position:
               
chr29:23844543-23844837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
38, 174
               

               
Conread position:
               
577-729
               

               
Cow position:
               
chr29:30844488-30844638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
577-769
               

               
Cow position:
               
chr29:13458791-13458978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
577-830
               

               
Cow position:
               
chr29:25333726-25333484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
578-831
               

               
Cow position:
               
chr29:18878773-18878513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
578-835
               

               
Cow position:
               
chr29:479114-479369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
112, 153
               

               
Conread position:
               
578-856
               

               
Cow position:
               
chr29:24033524-24033801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 221
               

               
Conread position:
               
580-732
               

               
Cow position:
               
chr29:41076296-41076141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
580-745
               

               
Cow position:
               
chr29:254811-254980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
580-754
               

               
Cow position:
               
chr29:28280800-28280629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
580-850
               

               
Cow position:
               
chr29:41530580-41530846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
581-737
               

               
Cow position:
               
chr29:21265466-21265621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
581-750
               

               
Cow position:
               
chr29:2263297-2263122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 159
               

               
Conread position:
               
581-810
               

               
Cow position:
               
chr29:4065819-4066048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
581-831
               

               
Cow position:
               
chr29:19338710-19338974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 161
               

               
Conread position:
               
581-836
               

               
Cow position:
               
chr29:24604417-24604158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
582-735
               

               
Cow position:
               
chr29:18694989-18695142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
582-774
               

               
Cow position:
               
chr29:5099030-5098836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
582-789
               

               
Cow position:
               
chr29:29312784-29312581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
582-810
               

               
Cow position:
               
chr29:12784224-12783993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
582-819
               

               
Cow position:
               
chr29:16195584-16195815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
162, 107
               

               
Conread position:
               
582-835
               

               
Cow position:
               
chr29:12679886-12680142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
583-826
               

               
Cow position:
               
chr29:4804966-4805211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
584-818
               

               
Cow position:
               
chr29:22175427-22175658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
584-825
               

               
Cow position:
               
chr29:94811-94578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
584-825
               

               
Cow position:
               
chr29:3502795-3503032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
585-731
               

               
Cow position:
               
chr29:30227399-30227548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
585-751
               

               
Cow position:
               
chr29:26137521-26137691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
586-776
               

               
Cow position:
               
chr29:4492301-4492113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
586-792
               

               
Cow position:
               
chr29:4691950-4691738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
586-825
               

               
Cow position:
               
chr29:8669091-8669342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 184
               

               
Conread position:
               
586-850
               

               
Cow position:
               
chr29:29769610-29769355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
158, 92
               

               
Conread position:
               
587-822
               

               
Cow position:
               
chr29:40891965-40891719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
587-850
               

               
Cow position:
               
chr29:31928716-31928985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
588-821
               

               
Cow position:
               
chr29:109448-109670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
588-821
               

               
Cow position:
               
chr29:37599466-37599235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 31
               

               
Conread position:
               
589-742
               

               
Cow position:
               
chr29:44236207-44236359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
589-766
               

               
Cow position:
               
chr29:27009157-27009338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 147
               

               
Conread position:
               
589-814
               

               
Cow position:
               
chr29:16756794-16757025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
589-850
               

               
Cow position:
               
chr29:22613174-22613426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
589-858
               

               
Cow position:
               
chr29:3237620-3237349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
590-693
               

               
Cow position:
               
chr29:38731365-38731467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
590-810
               

               
Cow position:
               
chr29:19389226-19389450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
143, 71
               

               
Conread position:
               
590-821
               

               
Cow position:
               
chr29:21236856-21237088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
591-822
               

               
Cow position:
               
chr29:35738529-35738296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 175
               

               
Conread position:
               
591-857
               

               
Cow position:
               
chr29:35677801-35677540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
592-822
               

               
Cow position:
               
chr29:707203-706972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
592-831
               

               
Cow position:
               
chr29:4194379-4194136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
592-857
               

               
Cow position:
               
chr29:34297823-34297565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 141
               

               
Conread position:
               
594-823
               

               
Cow position:
               
chr29:22162509-22162275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
594-825
               

               
Cow position:
               
chr29:17222152-17222389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 144
               

               
Conread position:
               
594-850
               

               
Cow position:
               
chr29:8926715-8926465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 140
               

               
Conread position:
               
595-814
               

               
Cow position:
               
chr29:356071-356286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
149, 113
               

               
Conread position:
               
597-848
               

               
Cow position:
               
chr29:585029-585278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
598-835
               

               
Cow position:
               
chr29:1556680-1556918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
194, 157
               

               
Conread position:
               
600-819
               

               
Cow position:
               
chr29:40299257-40299043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
600-821
               

               
Cow position:
               
chr29:11915567-11915794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
600-850
               

               
Cow position:
               
chr29:24103798-24103543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
600-857
               

               
Cow position:
               
chr29:18735893-18735636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
602-835
               

               
Cow position:
               
chr29:23984212-23983969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 149
               

               
Conread position:
               
603-821
               

               
Cow position:
               
chr29:36183029-36183256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
603-850
               

               
Cow position:
               
chr29:25737664-25737418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
604-850
               

               
Cow position:
               
chr29:20903534-20903289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 134
               

               
Conread position:
               
607-753
               

               
Cow position:
               
chr29:23578019-23577870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
607-800
               

               
Cow position:
               
chr29:14615499-14615304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
607-803
               

               
Cow position:
               
chr29:11562371-11562569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
608-805
               

               
Cow position:
               
chr29:16309508-16309699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
608-857
               

               
Cow position:
               
chr29:25474665-25474926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 224
               

               
Conread position:
               
609-789
               

               
Cow position:
               
chr29:10659589-10659399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
609-821
               

               
Cow position:
               
chr29:24119978-24119765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 123
               

               
Conread position:
               
611-818
               

               
Cow position:
               
chr29:34744855-34744651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
613-835
               

               
Cow position:
               
chr29:22714965-22714737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
613-850
               

               
Cow position:
               
chr29:4520098-4520336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 121
               

               
Conread position:
               
619-789
               

               
Cow position:
               
chr29:19254054-19253881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
619-804
               

               
Cow position:
               
chr29:23697747-23697936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 89
               

               
Conread position:
               
620-807
               

               
Cow position:
               
chr29:6286388-6286198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
620-814
               

               
Cow position:
               
chr29:39642946-39643142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
620-825
               

               
Cow position:
               
chr29:868542-868751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 199
               

               
Conread position:
               
621-824
               

               
Cow position:
               
chr29:1229379-1229580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
625-821
               

               
Cow position:
               
chr29:3711161-3711364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
633-825
               

               
Cow position:
               
chr29:22778399-22778199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
635-786
               

               
Cow position:
               
chr29:28446475-28446320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
635-818
               

               
Cow position:
               
chr29:2532846-2533030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
635-848
               

               
Cow position:
               
chr29:463869-463660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
635-856
               

               
Cow position:
               
chr29:14484761-14484535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
638-823
               

               
Cow position:
               
chr29:6337450-6337637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
643-813
               

               
Cow position:
               
chr29:41364902-41365078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
646-847
               

               
Cow position:
               
chr29:25091905-25092107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
649-806
               

               
Cow position:
               
chr29:28979681-28979528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
653-857
               

               
Cow position:
               
chr29:26042431-26042631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
662-805
               

               
Cow position:
               
chr29:4334539-4334684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.