Cow genome map
| Conread name: | Ss1.1-rcbl0_016468.5.5 | 
| Conread position: | 268-742 | 
| Cow position: | chr3:37662542-37663023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 306, 386 | 
| Conread position: | 377-573 | 
| Cow position: | chr3:56476088-56476285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 80, 19 | 
| Conread position: | 377-589 | 
| Cow position: | chr3:38863348-38863556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 377-606 | 
| Cow position: | chr3:8923265-8923497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 18, 122 | 
| Conread position: | 377-707 | 
| Cow position: | chr3:84598551-84598217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 50, 32 | 
| Conread position: | 377-731 | 
| Cow position: | chr3:54573266-54572907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 105, 20 | 
| Conread position: | 377-739 | 
| Cow position: | chr3:41315784-41316152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 84, 174 | 
| Conread position: | 377-760 | 
| Cow position: | chr3:54808663-54809048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 20 | 
| Conread position: | 378-531 | 
| Cow position: | chr3:61856579-61856729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 378-588 | 
| Cow position: | chr3:45342628-45342840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 84, 19 | 
| Conread position: | 378-742 | 
| Cow position: | chr3:17263319-17262949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 104, 19 | 
| Conread position: | 378-775 | 
| Cow position: | chr3:61262326-61262705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 366, 18 | 
| Conread position: | 378-803 | 
| Cow position: | chr3:58350083-58350522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 83, 11 | 
| Conread position: | 378-807 | 
| Cow position: | chr3:48252400-48252820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 11 | 
| Conread position: | 380-778 | 
| Cow position: | chr3:70730975-70731379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 9 | 
| Conread position: | 380-850 | 
| Cow position: | chr3:15387712-15388187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 16 | 
| Conread position: | 388-797 | 
| Cow position: | chr3:80654966-80655378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 29, 224 | 
| Conread position: | 389-684 | 
| Cow position: | chr3:13480387-13480674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 13, 58 | 
| Conread position: | 389-732 | 
| Cow position: | chr3:79139474-79139124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 8, 117 | 
| Conread position: | 390-602 | 
| Cow position: | chr3:25011816-25012030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 187, 7 | 
| Conread position: | 390-850 | 
| Cow position: | chr3:2007788-2008245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 7 | 
| Conread position: | 391-789 | 
| Cow position: | chr3:21070727-21070325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 236 | 
| Conread position: | 391-801 | 
| Cow position: | chr3:4662871-4663272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 353, 23 | 
| Conread position: | 392-613 | 
| Cow position: | chr3:46856695-46856471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 90, 80 | 
| Conread position: | 392-745 | 
| Cow position: | chr3:46013435-46013071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 70, 17 | 
| Conread position: | 392-780 | 
| Cow position: | chr3:56328874-56329269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 90, 80 | 
| Conread position: | 395-691 | 
| Cow position: | chr3:20780362-20780057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 20, 9 | 
| Conread position: | 395-824 | 
| Cow position: | chr3:65236533-65236977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 290 | 
| Conread position: | 396-590 | 
| Cow position: | chr3:22220825-22221018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 176, 52 | 
| Conread position: | 396-688 | 
| Cow position: | chr3:20804756-20805051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 86, 76 | 
| Conread position: | 396-688 | 
| Cow position: | chr3:83437581-83437287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 177, 286 | 
| Conread position: | 396-759 | 
| Cow position: | chr3:14438299-14437929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 86, 76 | 
| Conread position: | 396-789 | 
| Cow position: | chr3:17709861-17710253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 239, 233 | 
| Conread position: | 396-789 | 
| Cow position: | chr3:21100492-21100890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 282, 0 | 
| Conread position: | 396-810 | 
| Cow position: | chr3:73762947-73762526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 141, 314 | 
| Conread position: | 397-525 | 
| Cow position: | chr3:19753045-19752917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-558 | 
| Cow position: | chr3:70321431-70321267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 136, 0 | 
| Conread position: | 397-564 | 
| Cow position: | chr3:2524966-2525133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-564 | 
| Cow position: | chr3:66118681-66118514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-569 | 
| Cow position: | chr3:42847034-42847206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-572 | 
| Cow position: | chr3:2865964-2865789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-572 | 
| Cow position: | chr3:70074415-70074240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:10443063-10443239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:17895330-17895514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:19793998-19793818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 25, 19 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:25691253-25691430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:30384770-30384947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 9, 55 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:63501722-63501544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 68, 17 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:67624757-67624579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:74391218-74391040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:78261023-78260845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:80759899-80760077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-575 | 
| Cow position: | chr3:83201968-83201793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 397-581 | 
| Cow position: | chr3:14602224-14602040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 72, 26 | 
| Conread position: | 397-588 | 
| Cow position: | chr3:16890237-16890428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 63, 26 | 
| Conread position: | 397-588 | 
| Cow position: | chr3:20389892-20389695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 397-588 | 
| Cow position: | chr3:33254202-33254012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 179, 27 | 
| Conread position: | 397-588 | 
| Cow position: | chr3:64998345-64998537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 397-590 | 
| Cow position: | chr3:2680062-2680255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 179, 131 | 
| Conread position: | 397-592 | 
| Cow position: | chr3:56867-56677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 148, 64 | 
| Conread position: | 397-593 | 
| Cow position: | chr3:11819480-11819677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 55, 133 | 
| Conread position: | 397-594 | 
| Cow position: | chr3:22716781-22716581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 397-598 | 
| Cow position: | chr3:45668364-45668164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 18, 23 | 
| Conread position: | 397-600 | 
| Cow position: | chr3:73459746-73459951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 179, 86 | 
| Conread position: | 397-600 | 
| Cow position: | chr3:75157669-75157468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 166, 0 | 
| Conread position: | 397-601 | 
| Cow position: | chr3:51338486-51338279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-601 | 
| Cow position: | chr3:64024351-64024145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 175, 150 | 
| Conread position: | 397-602 | 
| Cow position: | chr3:5445137-5444930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 185, 55 | 
| Conread position: | 397-602 | 
| Cow position: | chr3:29573391-29573183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 176, 0 | 
| Conread position: | 397-602 | 
| Cow position: | chr3:56644640-56644432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-602 | 
| Cow position: | chr3:68583763-68583561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 182, 131 | 
| Conread position: | 397-603 | 
| Cow position: | chr3:69419395-69419185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 99, 35 | 
| Conread position: | 397-603 | 
| Cow position: | chr3:83775469-83775260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 25, 20 | 
| Conread position: | 397-604 | 
| Cow position: | chr3:48242240-48242030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-605 | 
| Cow position: | chr3:589091-589294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-605 | 
| Cow position: | chr3:24585540-24585328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 24, 203 | 
| Conread position: | 397-605 | 
| Cow position: | chr3:65536805-65537017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-606 | 
| Cow position: | chr3:17757674-17757461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 73, 186 | 
| Conread position: | 397-606 | 
| Cow position: | chr3:22739225-22739013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 176, 0 | 
| Conread position: | 397-606 | 
| Cow position: | chr3:23216643-23216430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 48, 35 | 
| Conread position: | 397-606 | 
| Cow position: | chr3:45978190-45978402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-607 | 
| Cow position: | chr3:58033978-58033768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 179, 24 | 
| Conread position: | 397-610 | 
| Cow position: | chr3:24572381-24572164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 397-612 | 
| Cow position: | chr3:24344173-24343955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-613 | 
| Cow position: | chr3:84807845-84807627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 179, 195 | 
| Conread position: | 397-617 | 
| Cow position: | chr3:36082291-36082069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 181, 81 | 
| Conread position: | 397-620 | 
| Cow position: | chr3:29328243-29328017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-620 | 
| Cow position: | chr3:43189576-43189348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 397-621 | 
| Cow position: | chr3:6068296-6068523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 173, 0 | 
| Conread position: | 397-621 | 
| Cow position: | chr3:6754375-6754602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-621 | 
| Cow position: | chr3:13002307-13002085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 174, 0 | 
| Conread position: | 397-621 | 
| Cow position: | chr3:20388780-20388553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-621 | 
| Cow position: | chr3:31078673-31078446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 176, 0 | 
| Conread position: | 397-621 | 
| Cow position: | chr3:51256629-51256856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:11122967-11123195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:12932457-12932685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:30301680-30301908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:34819698-34819470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:43525049-43524821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:64015480-64015252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:67196638-67196410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:69273586-69273814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:78520736-78520964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-622 | 
| Cow position: | chr3:82398146-82398372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-623 | 
| Cow position: | chr3:579870-580099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-623 | 
| Cow position: | chr3:15089458-15089685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 175, 75 | 
| Conread position: | 397-623 | 
| Cow position: | chr3:36874371-36874142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 397-623 | 
| Cow position: | chr3:66968188-66967959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-624 | 
| Cow position: | chr3:38698063-38698293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 176, 0 | 
| Conread position: | 397-627 | 
| Cow position: | chr3:29595894-29596122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 201, 0 | 
| Conread position: | 397-628 | 
| Cow position: | chr3:34392594-34392368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 176, 30 | 
| Conread position: | 397-631 | 
| Cow position: | chr3:68156002-68156236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 13, 223 | 
| Conread position: | 397-657 | 
| Cow position: | chr3:49132733-49132470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 75, 160 | 
| Conread position: | 397-665 | 
| Cow position: | chr3:4319467-4319205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 179, 135 | 
| Conread position: | 397-669 | 
| Cow position: | chr3:3890154-3889870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 397-669 | 
| Cow position: | chr3:19942573-19942846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-675 | 
| Cow position: | chr3:24872279-24872541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 46, 166 | 
| Conread position: | 397-676 | 
| Cow position: | chr3:66859300-66859583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 68, 126 | 
| Conread position: | 397-683 | 
| Cow position: | chr3:16291045-16290764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 68, 23 | 
| Conread position: | 397-688 | 
| Cow position: | chr3:12027801-12028095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-688 | 
| Cow position: | chr3:47758399-47758693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 175, 257 | 
| Conread position: | 397-688 | 
| Cow position: | chr3:81057836-81057542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-691 | 
| Cow position: | chr3:597811-598108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 180, 257 | 
| Conread position: | 397-700 | 
| Cow position: | chr3:21593971-21594278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-700 | 
| Cow position: | chr3:27515778-27516083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-700 | 
| Cow position: | chr3:53787705-53787399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-702 | 
| Cow position: | chr3:64216262-64216573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 81 | 
| Conread position: | 397-704 | 
| Cow position: | chr3:6714798-6715106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-710 | 
| Cow position: | chr3:18815184-18815495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 175, 58 | 
| Conread position: | 397-712 | 
| Cow position: | chr3:4691518-4691842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 34, 39 | 
| Conread position: | 397-712 | 
| Cow position: | chr3:20843879-20843562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-712 | 
| Cow position: | chr3:38096591-38096908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 183, 254 | 
| Conread position: | 397-722 | 
| Cow position: | chr3:1622791-1623124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-726 | 
| Cow position: | chr3:2334807-2335140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 146 | 
| Conread position: | 397-727 | 
| Cow position: | chr3:174458-174788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 48, 43 | 
| Conread position: | 397-728 | 
| Cow position: | chr3:14680772-14681110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-728 | 
| Cow position: | chr3:23598348-23598010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-728 | 
| Cow position: | chr3:28764732-28764398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-728 | 
| Cow position: | chr3:42670846-42671178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 96 | 
| Conread position: | 397-730 | 
| Cow position: | chr3:6897883-6898205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 75, 199 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:9435484-9435825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:30815858-30816199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 175, 257 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:31224977-31225312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 119 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:32411876-32411535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:35043850-35044191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:50941322-50940981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-731 | 
| Cow position: | chr3:64294200-64294540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 110 | 
| Conread position: | 397-732 | 
| Cow position: | chr3:40284658-40284316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-732 | 
| Cow position: | chr3:42277563-42277222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-734 | 
| Cow position: | chr3:58061082-58060751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 183, 104 | 
| Conread position: | 397-735 | 
| Cow position: | chr3:19711793-19711448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 258 | 
| Conread position: | 397-735 | 
| Cow position: | chr3:53407731-53407391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 180, 231 | 
| Conread position: | 397-736 | 
| Cow position: | chr3:36170277-36169927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 65, 304 | 
| Conread position: | 397-739 | 
| Cow position: | chr3:68261078-68261434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 64, 223 | 
| Conread position: | 397-741 | 
| Cow position: | chr3:7155116-7154766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:1438253-1438605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:2075471-2075823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:2573218-2573570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:3596220-3595868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:3618491-3618843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:6838723-6839074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 71 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:6884836-6885188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:7767604-7767956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:8330966-8331319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:11418237-11418589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:11785041-11785393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:14144890-14144538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:14923340-14923693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:15233472-15233121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:15417157-15417509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:18052231-18051879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:18863128-18863480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 58, 72 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:19881740-19882092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:24557885-24557533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:26892181-26892533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:28933594-28933946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:29461494-29461142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:30328979-30328627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:30753273-30753625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:32356441-32356792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:32769501-32769855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 34, 76 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:34503448-34503096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:35342176-35341824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:36013848-36014200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:36417430-36417782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:38748071-38748424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:40205512-40205160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:41018620-41018268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:41569269-41568917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:43634161-43633809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:45748945-45749297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:46261058-46261412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:47106608-47106962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 30, 259 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:47719937-47720289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:49930555-49930203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:49975839-49975487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:50217679-50218031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:50959904-50960256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 175, 257 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:51032867-51033216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 225 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:51520376-51520024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:51857541-51857893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:52011460-52011812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:52045329-52044977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 257 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:55837532-55837878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:56484564-56484212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:58336997-58337342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 175, 72 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:58912728-58913080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:59748131-59747779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:60514419-60514067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:61200480-61200832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:66603694-66603360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 85, 78 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:68888882-68888530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:76865122-76865474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-742 | 
| Cow position: | chr3:80741561-80741913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-743 | 
| Cow position: | chr3:46007642-46007993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 166 | 
| Conread position: | 397-744 | 
| Cow position: | chr3:20476189-20476543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-746 | 
| Cow position: | chr3:13513212-13512870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 23 | 
| Conread position: | 397-746 | 
| Cow position: | chr3:19827771-19827418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 173, 18 | 
| Conread position: | 397-747 | 
| Cow position: | chr3:6402820-6403168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 17 | 
| Conread position: | 397-750 | 
| Cow position: | chr3:35919250-35919611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-751 | 
| Cow position: | chr3:29560395-29560033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-754 | 
| Cow position: | chr3:20379029-20378677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 228, 75 | 
| Conread position: | 397-754 | 
| Cow position: | chr3:47987153-47987522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-754 | 
| Cow position: | chr3:65474118-65474483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-756 | 
| Cow position: | chr3:23011042-23011403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 179 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:14261122-14261491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 41, 76 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:15687998-15687635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 100, 22 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:19234464-19234832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:28434886-28434518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:42976624-42976257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 175, 96 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:45097930-45098298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:49907344-49906974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:64654325-64654694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:68870064-68869698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:74061158-74061526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 58, 72 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:78472300-78471933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-757 | 
| Cow position: | chr3:79668801-79669169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 257 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:302912-303280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:2833848-2833479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:3836918-3836543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 128, 361 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:13361137-13361506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:13722161-13721791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:14888990-14889359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:19691804-19691438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:19884144-19884512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:29412345-29412725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:36121865-36122234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:41396058-41396427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:51242612-51242244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:51869750-51870119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-758 | 
| Cow position: | chr3:59341864-59342233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-759 | 
| Cow position: | chr3:8240450-8240820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 180, 199 | 
| Conread position: | 397-759 | 
| Cow position: | chr3:24265888-24266258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-759 | 
| Cow position: | chr3:36670902-36670534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 343 | 
| Conread position: | 397-759 | 
| Cow position: | chr3:65085624-65085993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-759 | 
| Cow position: | chr3:66283679-66284051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 217, 171 | 
| Conread position: | 397-759 | 
| Cow position: | chr3:81064115-81064484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:2364569-2364198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:2707184-2706834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 181, 57 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:10244350-10244721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:18245893-18245531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 41 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:21178566-21178196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 229 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:26722129-26721757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 68, 222 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:32326259-32325888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:38870256-38870623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:39112273-39112642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 182, 271 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:40827376-40827747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:41057650-41058021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:73211519-73211877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 64 | 
| Conread position: | 397-760 | 
| Cow position: | chr3:84419261-84418894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 20 | 
| Conread position: | 397-761 | 
| Cow position: | chr3:16226565-16226927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 75 | 
| Conread position: | 397-762 | 
| Cow position: | chr3:20225678-20226047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 20 | 
| Conread position: | 397-763 | 
| Cow position: | chr3:4864995-4864621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 225 | 
| Conread position: | 397-766 | 
| Cow position: | chr3:1760181-1760557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-766 | 
| Cow position: | chr3:2431332-2430945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 25, 20 | 
| Conread position: | 397-766 | 
| Cow position: | chr3:49564707-49565087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 176, 257 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:1034778-1035157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:4135289-4134917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:7245418-7245038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:13326642-13326263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:14280366-14280743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 61 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:16620064-16619683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:18874993-18874616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:19959285-19959668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:22490313-22490691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 177, 127 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:22724095-22723728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 175, 80 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:24639099-24639489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 72, 237 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:26742186-26741804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:26801775-26802150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:27687672-27687293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 143 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:30351974-30352351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 177, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:35612833-35613212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:35805503-35805882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:36861416-36861041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 78 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:40194561-40194940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:43463767-43463390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 175, 81 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:44927504-44927883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:45946835-45946456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:46683524-46683903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:49286852-49287231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:53879575-53879196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:66887502-66887123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:69345303-69344921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:69486227-69486606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-768 | 
| Cow position: | chr3:75771444-75771070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 175, 230 | 
| Conread position: | 397-769 | 
| Cow position: | chr3:39065855-39066235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 303 | 
| Conread position: | 397-770 | 
| Cow position: | chr3:22908302-22907932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 286, 75 | 
| Conread position: | 397-770 | 
| Cow position: | chr3:37150716-37150344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-772 | 
| Cow position: | chr3:54766644-54767014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 211 | 
| Conread position: | 397-773 | 
| Cow position: | chr3:40049576-40049962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-774 | 
| Cow position: | chr3:24758788-24758413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-776 | 
| Cow position: | chr3:13248330-13247945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-778 | 
| Cow position: | chr3:40520249-40519861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 86, 75 | 
| Conread position: | 397-778 | 
| Cow position: | chr3:72131780-72131389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 102, 294 | 
| Conread position: | 397-780 | 
| Cow position: | chr3:36657251-36656861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 397-781 | 
| Cow position: | chr3:20998158-20997770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-781 | 
| Cow position: | chr3:50768197-50768591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 224 | 
| Conread position: | 397-781 | 
| Cow position: | chr3:51013016-51012623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 0 | 
| Conread position: | 397-781 | 
| Cow position: | chr3:77276880-77276498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 86 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:997476-997878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 173, 0 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:2922321-2922720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:6265028-6265429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:6689518-6689918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 239, 17 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:6864105-6863704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 201 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:20795983-20796383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:24887273-24887676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 23, 52 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:39857660-39858063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 213 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:45026256-45025857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 82 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:45215112-45214723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 20 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:59865170-59865569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 246 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:62827087-62826702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 23 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:65989596-65989996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 102 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:72776759-72777165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:75038151-75037751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 183, 238 | 
| Conread position: | 397-789 | 
| Cow position: | chr3:81102024-81102421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 80 | 
| Conread position: | 397-792 | 
| Cow position: | chr3:55085667-55085257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 107 | 
| Conread position: | 397-792 | 
| Cow position: | chr3:66829260-66828857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 180, 291 | 
| Conread position: | 397-797 | 
| Cow position: | chr3:49416161-49415752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 257 | 
| Conread position: | 397-797 | 
| Cow position: | chr3:56158688-56159096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-797 | 
| Cow position: | chr3:58383484-58383894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 346 | 
| Conread position: | 397-799 | 
| Cow position: | chr3:79902025-79902436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 397-802 | 
| Cow position: | chr3:79592366-79591949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 0 | 
| Conread position: | 397-803 | 
| Cow position: | chr3:31419217-31419636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 305 | 
| Conread position: | 397-803 | 
| Cow position: | chr3:35299197-35299600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 96 | 
| Conread position: | 397-804 | 
| Cow position: | chr3:23735580-23735166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 150 | 
| Conread position: | 397-806 | 
| Cow position: | chr3:46900718-46901134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 141, 69 | 
| Conread position: | 397-807 | 
| Cow position: | chr3:16157207-16157618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 282, 183 | 
| Conread position: | 397-807 | 
| Cow position: | chr3:31298631-31298215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 81 | 
| Conread position: | 397-807 | 
| Cow position: | chr3:61278437-61278853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 86 | 
| Conread position: | 397-807 | 
| Cow position: | chr3:62624110-62623711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 24 | 
| Conread position: | 397-810 | 
| Cow position: | chr3:9641070-9641506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 357 | 
| Conread position: | 397-810 | 
| Cow position: | chr3:14456380-14455965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 86 | 
| Conread position: | 397-810 | 
| Cow position: | chr3:72668661-72668249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 180, 208 | 
| Conread position: | 397-813 | 
| Cow position: | chr3:2506957-2506532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 213 | 
| Conread position: | 397-814 | 
| Cow position: | chr3:3164970-3164550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 345, 150 | 
| Conread position: | 397-814 | 
| Cow position: | chr3:11254624-11254215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 120 | 
| Conread position: | 397-814 | 
| Cow position: | chr3:73764657-73764250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 158 | 
| Conread position: | 397-815 | 
| Cow position: | chr3:44535238-44534814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 211 | 
| Conread position: | 397-819 | 
| Cow position: | chr3:45881430-45881853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 55 | 
| Conread position: | 397-821 | 
| Cow position: | chr3:59514645-59515055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 347, 148 | 
| Conread position: | 397-822 | 
| Cow position: | chr3:18459998-18459569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 311 | 
| Conread position: | 397-822 | 
| Cow position: | chr3:58541017-58540575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 43 | 
| Conread position: | 397-823 | 
| Cow position: | chr3:60892154-60892576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 76 | 
| Conread position: | 397-824 | 
| Cow position: | chr3:26894193-26894617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 291, 218 | 
| Conread position: | 397-825 | 
| Cow position: | chr3:29806986-29807420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 86 | 
| Conread position: | 397-825 | 
| Cow position: | chr3:30700841-30701264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 143, 75 | 
| Conread position: | 397-825 | 
| Cow position: | chr3:48296224-48296666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 236 | 
| Conread position: | 397-825 | 
| Cow position: | chr3:69930146-69929713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 55 | 
| Conread position: | 397-826 | 
| Cow position: | chr3:66610317-66609887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 282 | 
| Conread position: | 397-827 | 
| Cow position: | chr3:9843096-9843542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 61 | 
| Conread position: | 397-827 | 
| Cow position: | chr3:14724820-14725260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 150 | 
| Conread position: | 397-827 | 
| Cow position: | chr3:32619322-32618883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 76 | 
| Conread position: | 397-827 | 
| Cow position: | chr3:34270457-34270873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 309, 41 | 
| Conread position: | 397-828 | 
| Cow position: | chr3:46506462-46506906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 220 | 
| Conread position: | 397-831 | 
| Cow position: | chr3:6442757-6443204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 397-832 | 
| Cow position: | chr3:59603491-59603927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 23 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:5475230-5475671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 175, 51 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:11385197-11385641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 70 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:23203982-23203543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 237 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:53519470-53519904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 80 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:54653469-54653027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 290 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:60093053-60092618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 282, 101 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:66623876-66624314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 226 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:77472310-77471869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 257 | 
| Conread position: | 397-833 | 
| Cow position: | chr3:78023757-78023315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 257 | 
| Conread position: | 397-834 | 
| Cow position: | chr3:30567806-30568252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 81 | 
| Conread position: | 397-834 | 
| Cow position: | chr3:55057981-55058425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 256 | 
| Conread position: | 397-835 | 
| Cow position: | chr3:26973945-26973494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 229 | 
| Conread position: | 397-835 | 
| Cow position: | chr3:30359109-30358670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 183, 17 | 
| Conread position: | 397-835 | 
| Cow position: | chr3:33124568-33124123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 80 | 
| Conread position: | 397-835 | 
| Cow position: | chr3:64011298-64010855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 142 | 
| Conread position: | 397-835 | 
| Cow position: | chr3:74233733-74234157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 60 | 
| Conread position: | 397-836 | 
| Cow position: | chr3:15161543-15161100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 180, 51 | 
| Conread position: | 397-838 | 
| Cow position: | chr3:37009055-37008621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 182, 67 | 
| Conread position: | 397-849 | 
| Cow position: | chr3:53384761-53384307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 29 | 
| Conread position: | 397-849 | 
| Cow position: | chr3:65968677-65969140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 135 | 
| Conread position: | 397-850 | 
| Cow position: | chr3:2024692-2025170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 84 | 
| Conread position: | 397-850 | 
| Cow position: | chr3:15052405-15051974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 134, 64 | 
| Conread position: | 397-850 | 
| Cow position: | chr3:25673608-25673169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 71, 159 | 
| Conread position: | 397-850 | 
| Cow position: | chr3:53047119-53046685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 332, 180 | 
| Conread position: | 397-853 | 
| Cow position: | chr3:24853053-24852608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 70 | 
| Conread position: | 397-855 | 
| Cow position: | chr3:24433067-24433529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 257 | 
| Conread position: | 397-855 | 
| Cow position: | chr3:24442416-24441954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 257 | 
| Conread position: | 397-855 | 
| Cow position: | chr3:52149594-52149126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 257 | 
| Conread position: | 397-855 | 
| Cow position: | chr3:68042923-68042464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 237 | 
| Conread position: | 397-856 | 
| Cow position: | chr3:2674551-2675009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 316 | 
| Conread position: | 397-857 | 
| Cow position: | chr3:27289446-27289920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 45 | 
| Conread position: | 397-857 | 
| Cow position: | chr3:60932954-60933398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 298, 179 | 
| Conread position: | 397-857 | 
| Cow position: | chr3:61539319-61539787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 427 | 
| Conread position: | 397-858 | 
| Cow position: | chr3:42423812-42423344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 43 | 
| Conread position: | 397-858 | 
| Cow position: | chr3:49649903-49650370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 146 | 
| Conread position: | 397-866 | 
| Cow position: | chr3:13275528-13275059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-866 | 
| Cow position: | chr3:28668998-28668526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 397-866 | 
| Cow position: | chr3:49610525-49610053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 398-584 | 
| Cow position: | chr3:42371522-42371338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 398-625 | 
| Cow position: | chr3:4871028-4871253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 178, 76 | 
| Conread position: | 398-627 | 
| Cow position: | chr3:37948784-37948548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 17, 215 | 
| Conread position: | 398-687 | 
| Cow position: | chr3:40069166-40068882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 46, 185 | 
| Conread position: | 398-712 | 
| Cow position: | chr3:29282444-29282761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 10, 310 | 
| Conread position: | 398-712 | 
| Cow position: | chr3:56335991-56335674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 10, 310 | 
| Conread position: | 398-737 | 
| Cow position: | chr3:2901603-2901263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 23, 71 | 
| Conread position: | 398-742 | 
| Cow position: | chr3:6262588-6262940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 10, 75 | 
| Conread position: | 398-742 | 
| Cow position: | chr3:49604755-49604405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 84, 74 | 
| Conread position: | 398-755 | 
| Cow position: | chr3:4161082-4160717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 10, 20 | 
| Conread position: | 398-756 | 
| Cow position: | chr3:46753532-46753899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 10, 279 | 
| Conread position: | 398-760 | 
| Cow position: | chr3:226202-225847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 178, 88 | 
| Conread position: | 398-760 | 
| Cow position: | chr3:7280349-7280719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 81 | 
| Conread position: | 398-761 | 
| Cow position: | chr3:5887568-5887929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 174, 205 | 
| Conread position: | 398-768 | 
| Cow position: | chr3:20519759-20520141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 15, 311 | 
| Conread position: | 398-783 | 
| Cow position: | chr3:14446329-14446696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 10, 86 | 
| Conread position: | 398-789 | 
| Cow position: | chr3:34026875-34026480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 20 | 
| Conread position: | 398-807 | 
| Cow position: | chr3:55010642-55010226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 63, 265 | 
| Conread position: | 398-827 | 
| Cow position: | chr3:14466181-14465756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 251 | 
| Conread position: | 398-833 | 
| Cow position: | chr3:78110636-78111074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 200 | 
| Conread position: | 398-856 | 
| Cow position: | chr3:7566891-7566437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 349, 137 | 
| Conread position: | 398-856 | 
| Cow position: | chr3:48269383-48269845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 346 | 
| Conread position: | 399-596 | 
| Cow position: | chr3:10582808-10583015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 399-750 | 
| Cow position: | chr3:27242991-27242640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 305, 166 | 
| Conread position: | 399-760 | 
| Cow position: | chr3:40568499-40568134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 178, 78 | 
| Conread position: | 399-775 | 
| Cow position: | chr3:48567140-48566757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 53 | 
| Conread position: | 399-804 | 
| Cow position: | chr3:77187974-77188372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 345, 69 | 
| Conread position: | 399-823 | 
| Cow position: | chr3:9663663-9663218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 390 | 
| Conread position: | 399-825 | 
| Cow position: | chr3:65413767-65413324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 239 | 
| Conread position: | 399-828 | 
| Cow position: | chr3:75051109-75050664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 17, 148 | 
| Conread position: | 400-661 | 
| Cow position: | chr3:62791447-62791181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 26, 15 | 
| Conread position: | 400-702 | 
| Cow position: | chr3:18917623-18917930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 400-705 | 
| Cow position: | chr3:22882526-22882217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 55, 239 | 
| Conread position: | 400-735 | 
| Cow position: | chr3:41947585-41947255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 290, 61 | 
| Conread position: | 400-743 | 
| Cow position: | chr3:40687203-40687544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 29, 21 | 
| Conread position: | 400-759 | 
| Cow position: | chr3:28635202-28634837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 55 | 
| Conread position: | 400-791 | 
| Cow position: | chr3:1133571-1133172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 400-814 | 
| Cow position: | chr3:71230930-71231343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 289 | 
| Conread position: | 400-849 | 
| Cow position: | chr3:36570516-36570072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 78 | 
| Conread position: | 401-622 | 
| Cow position: | chr3:56298077-56298297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 171, 74 | 
| Conread position: | 401-729 | 
| Cow position: | chr3:66649924-66649581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 401-759 | 
| Cow position: | chr3:13311306-13310943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 81, 71 | 
| Conread position: | 401-842 | 
| Cow position: | chr3:50123977-50123549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 335, 198 | 
| Conread position: | 401-857 | 
| Cow position: | chr3:25690319-25690774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 277, 167 | 
| Conread position: | 402-728 | 
| Cow position: | chr3:53574023-53573690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 60, 193 | 
| Conread position: | 403-537 | 
| Cow position: | chr3:19198248-19198386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 403-622 | 
| Cow position: | chr3:3257487-3257265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 16, 40 | 
| Conread position: | 403-628 | 
| Cow position: | chr3:70335693-70335463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 403-681 | 
| Cow position: | chr3:18758715-18758428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 403-699 | 
| Cow position: | chr3:55110315-55110017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 219 | 
| Conread position: | 403-731 | 
| Cow position: | chr3:30192760-30192424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 6, 170 | 
| Conread position: | 403-735 | 
| Cow position: | chr3:11789659-11790000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 61, 161 | 
| Conread position: | 403-768 | 
| Cow position: | chr3:6059057-6058685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 79, 29 | 
| Conread position: | 403-776 | 
| Cow position: | chr3:62999469-62999093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 125 | 
| Conread position: | 403-824 | 
| Cow position: | chr3:69751173-69750747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 280 | 
| Conread position: | 403-850 | 
| Cow position: | chr3:55272504-55272071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 127 | 
| Conread position: | 403-857 | 
| Cow position: | chr3:17937322-17936856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 39 | 
| Conread position: | 403-857 | 
| Cow position: | chr3:33698253-33698712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 287, 172 | 
| Conread position: | 404-548 | 
| Cow position: | chr3:39970364-39970221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 99, 5 | 
| Conread position: | 404-569 | 
| Cow position: | chr3:9639333-9639169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 404-573 | 
| Cow position: | chr3:29360634-29360465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 404-573 | 
| Cow position: | chr3:62883502-62883675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:31120131-31119961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:40005565-40005737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:43424827-43425001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 6, 96 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:45647185-45647355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:51609297-51609468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:52418464-52418638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 72, 143 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:73467112-73467287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 404-575 | 
| Cow position: | chr3:76923613-76923443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 404-586 | 
| Cow position: | chr3:79978497-79978307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 404-588 | 
| Cow position: | chr3:23876175-23876362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 404-588 | 
| Cow position: | chr3:68628171-68627989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 404-588 | 
| Cow position: | chr3:72018371-72018560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 29, 180 | 
| Conread position: | 404-588 | 
| Cow position: | chr3:77071033-77070846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 404-592 | 
| Cow position: | chr3:20093206-20093019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 172, 67 | 
| Conread position: | 404-592 | 
| Cow position: | chr3:39171982-39171786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 404-593 | 
| Cow position: | chr3:79375495-79375694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 63, 139 | 
| Conread position: | 404-598 | 
| Cow position: | chr3:3061945-3062139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 404-600 | 
| Cow position: | chr3:57743253-57743454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 159, 78 | 
| Conread position: | 404-601 | 
| Cow position: | chr3:59208275-59208478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 404-602 | 
| Cow position: | chr3:26065306-26065502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 39, 34 | 
| Conread position: | 404-602 | 
| Cow position: | chr3:64655901-64656102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 166, 0 | 
| Conread position: | 404-602 | 
| Cow position: | chr3:66903849-66903649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 168, 0 | 
| Conread position: | 404-602 | 
| Cow position: | chr3:69127257-69127062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 172, 100 | 
| Conread position: | 404-602 | 
| Cow position: | chr3:72633769-72633969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 173, 148 | 
| Conread position: | 404-603 | 
| Cow position: | chr3:495755-495553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 404-603 | 
| Cow position: | chr3:30908424-30908215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 64, 132 | 
| Conread position: | 404-606 | 
| Cow position: | chr3:18606609-18606821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 157, 0 | 
| Conread position: | 404-617 | 
| Cow position: | chr3:30322224-30322439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 173, 54 | 
| Conread position: | 404-617 | 
| Cow position: | chr3:31383288-31383083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 169, 11 | 
| Conread position: | 404-617 | 
| Cow position: | chr3:56705055-56704839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 18, 169 | 
| Conread position: | 404-621 | 
| Cow position: | chr3:26712351-26712132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 21, 13 | 
| Conread position: | 404-621 | 
| Cow position: | chr3:49134010-49133790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 173, 0 | 
| Conread position: | 404-621 | 
| Cow position: | chr3:73450616-73450394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 159, 74 | 
| Conread position: | 404-622 | 
| Cow position: | chr3:3372488-3372267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-622 | 
| Cow position: | chr3:47077915-47077694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-623 | 
| Cow position: | chr3:2118166-2118390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 153, 0 | 
| Conread position: | 404-625 | 
| Cow position: | chr3:50205270-50205489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-626 | 
| Cow position: | chr3:2384191-2383961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 404-626 | 
| Cow position: | chr3:31287874-31287638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 56, 125 | 
| Conread position: | 404-626 | 
| Cow position: | chr3:55836385-55836159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 141, 18 | 
| Conread position: | 404-627 | 
| Cow position: | chr3:39945247-39945012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 106 | 
| Conread position: | 404-627 | 
| Cow position: | chr3:62912421-62912186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 404-628 | 
| Cow position: | chr3:83928421-83928648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 172, 120 | 
| Conread position: | 404-636 | 
| Cow position: | chr3:15191882-15192112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 161, 0 | 
| Conread position: | 404-638 | 
| Cow position: | chr3:73930870-73930638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 404-639 | 
| Cow position: | chr3:13493612-13493851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 54, 176 | 
| Conread position: | 404-640 | 
| Cow position: | chr3:35109924-35110162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-645 | 
| Cow position: | chr3:47468702-47468453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 57, 85 | 
| Conread position: | 404-660 | 
| Cow position: | chr3:17899347-17899608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 55, 171 | 
| Conread position: | 404-672 | 
| Cow position: | chr3:57834949-57834669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 61, 153 | 
| Conread position: | 404-673 | 
| Cow position: | chr3:69448172-69447896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 404-675 | 
| Cow position: | chr3:21655610-21655889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 57, 255 | 
| Conread position: | 404-677 | 
| Cow position: | chr3:32221418-32221689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 404-677 | 
| Cow position: | chr3:57403274-57402999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 175, 94 | 
| Conread position: | 404-677 | 
| Cow position: | chr3:68667117-68666835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 404-684 | 
| Cow position: | chr3:79094537-79094258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 172, 178 | 
| Conread position: | 404-688 | 
| Cow position: | chr3:17331297-17331584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 404-688 | 
| Cow position: | chr3:22083600-22083322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 39, 90 | 
| Conread position: | 404-688 | 
| Cow position: | chr3:63688233-63687947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 218 | 
| Conread position: | 404-693 | 
| Cow position: | chr3:63177037-63177332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 89, 224 | 
| Conread position: | 404-697 | 
| Cow position: | chr3:76155245-76155536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 143 | 
| Conread position: | 404-702 | 
| Cow position: | chr3:11447534-11447827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 404-702 | 
| Cow position: | chr3:69510853-69510552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 58, 219 | 
| Conread position: | 404-707 | 
| Cow position: | chr3:8497222-8496918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 55, 148 | 
| Conread position: | 404-708 | 
| Cow position: | chr3:20997442-20997144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 404-712 | 
| Cow position: | chr3:33268795-33268488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 173, 218 | 
| Conread position: | 404-718 | 
| Cow position: | chr3:48073485-48073165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 213, 87 | 
| Conread position: | 404-721 | 
| Cow position: | chr3:6384198-6384521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-721 | 
| Cow position: | chr3:10958680-10958380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 404-722 | 
| Cow position: | chr3:2044788-2044476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 58, 146 | 
| Conread position: | 404-722 | 
| Cow position: | chr3:61183157-61183480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 61, 97 | 
| Conread position: | 404-725 | 
| Cow position: | chr3:70371182-70370856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 61, 180 | 
| Conread position: | 404-728 | 
| Cow position: | chr3:51490987-51491322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 57, 101 | 
| Conread position: | 404-730 | 
| Cow position: | chr3:22353659-22354012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 57, 236 | 
| Conread position: | 404-731 | 
| Cow position: | chr3:15530331-15530660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 168, 230 | 
| Conread position: | 404-731 | 
| Cow position: | chr3:54909090-54909423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 57, 183 | 
| Conread position: | 404-731 | 
| Cow position: | chr3:55985197-55985533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 5, 95 | 
| Conread position: | 404-732 | 
| Cow position: | chr3:42562978-42563316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 60, 185 | 
| Conread position: | 404-732 | 
| Cow position: | chr3:64537020-64536687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 57, 225 | 
| Conread position: | 404-732 | 
| Cow position: | chr3:68256609-68256948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 18, 49 | 
| Conread position: | 404-732 | 
| Cow position: | chr3:72614983-72615323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 57, 224 | 
| Conread position: | 404-732 | 
| Cow position: | chr3:74849515-74849179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 58, 224 | 
| Conread position: | 404-732 | 
| Cow position: | chr3:82617914-82618248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 100 | 
| Conread position: | 404-733 | 
| Cow position: | chr3:45700363-45700688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 263 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:470914-470559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 57, 119 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:33327214-33327567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 71, 25 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:44254910-44254563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 57, 18 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:48811456-48811120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 230 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:55460972-55460633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 54, 145 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:58953821-58954164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 27, 90 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:65581511-65581152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 77, 265 | 
| Conread position: | 404-735 | 
| Cow position: | chr3:78241865-78242207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 404-736 | 
| Cow position: | chr3:2627845-2628183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 57, 139 | 
| Conread position: | 404-736 | 
| Cow position: | chr3:19109262-19109600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 57, 132 | 
| Conread position: | 404-736 | 
| Cow position: | chr3:32772753-32773098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 58, 215 | 
| Conread position: | 404-736 | 
| Cow position: | chr3:67044570-67044232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 221 | 
| Conread position: | 404-737 | 
| Cow position: | chr3:15557484-15557833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 57, 101 | 
| Conread position: | 404-737 | 
| Cow position: | chr3:26532289-26531944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 60, 157 | 
| Conread position: | 404-737 | 
| Cow position: | chr3:36729196-36729555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 57, 262 | 
| Conread position: | 404-737 | 
| Cow position: | chr3:70130295-70129943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 73, 264 | 
| Conread position: | 404-737 | 
| Cow position: | chr3:72603874-72604219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 60, 100 | 
| Conread position: | 404-740 | 
| Cow position: | chr3:34603504-34603855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 41, 217 | 
| Conread position: | 404-742 | 
| Cow position: | chr3:34016271-34016616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-742 | 
| Cow position: | chr3:39232409-39232754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-742 | 
| Cow position: | chr3:42507515-42507169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 48, 69 | 
| Conread position: | 404-742 | 
| Cow position: | chr3:47233702-47233357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-742 | 
| Cow position: | chr3:51666413-51666759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 45, 69 | 
| Conread position: | 404-743 | 
| Cow position: | chr3:20562180-20561833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 80, 73 | 
| Conread position: | 404-744 | 
| Cow position: | chr3:3553085-3553417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 51, 65 | 
| Conread position: | 404-750 | 
| Cow position: | chr3:78546572-78546216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 71, 57 | 
| Conread position: | 404-750 | 
| Cow position: | chr3:84152838-84153203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 404-753 | 
| Cow position: | chr3:8591811-8591474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 220 | 
| Conread position: | 404-753 | 
| Cow position: | chr3:8900941-8901300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 240 | 
| Conread position: | 404-755 | 
| Cow position: | chr3:74847228-74846853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 65, 223 | 
| Conread position: | 404-757 | 
| Cow position: | chr3:18907558-18907909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 170, 250 | 
| Conread position: | 404-757 | 
| Cow position: | chr3:39921251-39920890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 168, 250 | 
| Conread position: | 404-757 | 
| Cow position: | chr3:41206874-41206513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-758 | 
| Cow position: | chr3:12797363-12797000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-758 | 
| Cow position: | chr3:65179071-65179424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 168, 223 | 
| Conread position: | 404-758 | 
| Cow position: | chr3:68509496-68509142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-759 | 
| Cow position: | chr3:45293767-45294130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:4991210-4990855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 110, 223 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:14864577-14864929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 36 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:18670718-18671084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 105, 305 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:20747051-20746694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 268 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:51014297-51013945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 168, 86 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:62321613-62321244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 141, 27 | 
| Conread position: | 404-760 | 
| Cow position: | chr3:83884211-83884578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 404-761 | 
| Cow position: | chr3:5950898-5950536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 286, 0 | 
| Conread position: | 404-768 | 
| Cow position: | chr3:5988865-5988499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 170, 210 | 
| Conread position: | 404-768 | 
| Cow position: | chr3:37894521-37894893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 168, 352 | 
| Conread position: | 404-768 | 
| Cow position: | chr3:40051842-40052213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-772 | 
| Cow position: | chr3:8557252-8556885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 271 | 
| Conread position: | 404-772 | 
| Cow position: | chr3:62611441-62611806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 57, 139 | 
| Conread position: | 404-773 | 
| Cow position: | chr3:8752986-8753368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 57, 226 | 
| Conread position: | 404-773 | 
| Cow position: | chr3:73001440-73001813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 168, 68 | 
| Conread position: | 404-778 | 
| Cow position: | chr3:10448773-10448391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-778 | 
| Cow position: | chr3:56976458-56976085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 187, 181 | 
| Conread position: | 404-778 | 
| Cow position: | chr3:70913564-70913171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 57, 127 | 
| Conread position: | 404-780 | 
| Cow position: | chr3:14717337-14717718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 224 | 
| Conread position: | 404-780 | 
| Cow position: | chr3:53223119-53222731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 404-781 | 
| Cow position: | chr3:18184603-18184983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 123 | 
| Conread position: | 404-781 | 
| Cow position: | chr3:64376022-64375640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 205 | 
| Conread position: | 404-784 | 
| Cow position: | chr3:53934991-53935380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 78, 68 | 
| Conread position: | 404-786 | 
| Cow position: | chr3:14453356-14453743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 173, 243 | 
| Conread position: | 404-787 | 
| Cow position: | chr3:45523795-45524181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 72 | 
| Conread position: | 404-789 | 
| Cow position: | chr3:364679-364295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 270, 129 | 
| Conread position: | 404-789 | 
| Cow position: | chr3:12872792-12873177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 220 | 
| Conread position: | 404-790 | 
| Cow position: | chr3:37972725-37973106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 170, 89 | 
| Conread position: | 404-797 | 
| Cow position: | chr3:22919218-22919620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 13 | 
| Conread position: | 404-803 | 
| Cow position: | chr3:27867352-27867755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 67, 10 | 
| Conread position: | 404-803 | 
| Cow position: | chr3:35884423-35884019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 54 | 
| Conread position: | 404-803 | 
| Cow position: | chr3:61171958-61171572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 16, 21 | 
| Conread position: | 404-803 | 
| Cow position: | chr3:74561873-74561476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 57, 185 | 
| Conread position: | 404-806 | 
| Cow position: | chr3:11333781-11333376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 286, 65 | 
| Conread position: | 404-806 | 
| Cow position: | chr3:34556692-34556305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 145 | 
| Conread position: | 404-806 | 
| Cow position: | chr3:49218779-49218377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 89 | 
| Conread position: | 404-806 | 
| Cow position: | chr3:69962188-69961779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 313 | 
| Conread position: | 404-808 | 
| Cow position: | chr3:66978363-66978775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 342 | 
| Conread position: | 404-808 | 
| Cow position: | chr3:72390612-72391024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 205 | 
| Conread position: | 404-811 | 
| Cow position: | chr3:23278014-23277601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 304 | 
| Conread position: | 404-813 | 
| Cow position: | chr3:14552409-14552821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 118 | 
| Conread position: | 404-813 | 
| Cow position: | chr3:49337238-49337667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 57, 100 | 
| Conread position: | 404-814 | 
| Cow position: | chr3:12255004-12255422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 57, 21 | 
| Conread position: | 404-814 | 
| Cow position: | chr3:58766825-58767204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 66 | 
| Conread position: | 404-814 | 
| Cow position: | chr3:63147633-63147210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 57, 306 | 
| Conread position: | 404-814 | 
| Cow position: | chr3:82056581-82056164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 45, 144 | 
| Conread position: | 404-815 | 
| Cow position: | chr3:45312581-45312995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 215 | 
| Conread position: | 404-819 | 
| Cow position: | chr3:50762649-50763073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 159 | 
| Conread position: | 404-821 | 
| Cow position: | chr3:16656938-16656538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 140 | 
| Conread position: | 404-821 | 
| Cow position: | chr3:27544810-27544381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 298 | 
| Conread position: | 404-821 | 
| Cow position: | chr3:59648793-59649210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 94 | 
| Conread position: | 404-821 | 
| Cow position: | chr3:80054009-80053588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 19 | 
| Conread position: | 404-822 | 
| Cow position: | chr3:77271748-77271322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 126 | 
| Conread position: | 404-824 | 
| Cow position: | chr3:42177686-42178113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 38 | 
| Conread position: | 404-824 | 
| Cow position: | chr3:42603351-42603785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 312 | 
| Conread position: | 404-825 | 
| Cow position: | chr3:4049731-4050150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 58, 81 | 
| Conread position: | 404-825 | 
| Cow position: | chr3:26554193-26553757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 57, 233 | 
| Conread position: | 404-825 | 
| Cow position: | chr3:26920422-26920863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 147 | 
| Conread position: | 404-825 | 
| Cow position: | chr3:30179612-30180039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 300 | 
| Conread position: | 404-825 | 
| Cow position: | chr3:73708583-73709001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 95 | 
| Conread position: | 404-826 | 
| Cow position: | chr3:15685377-15684968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 68 | 
| Conread position: | 404-826 | 
| Cow position: | chr3:38497462-38497898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 15, 237 | 
| Conread position: | 404-826 | 
| Cow position: | chr3:40344923-40345359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 74, 368 | 
| Conread position: | 404-826 | 
| Cow position: | chr3:54434502-54434932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 111 | 
| Conread position: | 404-826 | 
| Cow position: | chr3:80082288-80081867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 227 | 
| Conread position: | 404-827 | 
| Cow position: | chr3:48241141-48241574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 94 | 
| Conread position: | 404-827 | 
| Cow position: | chr3:59118076-59117652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 222 | 
| Conread position: | 404-832 | 
| Cow position: | chr3:1831036-1830612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 251 | 
| Conread position: | 404-833 | 
| Cow position: | chr3:53538043-53538487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 56, 148 | 
| Conread position: | 404-835 | 
| Cow position: | chr3:15655623-15655181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 66, 187 | 
| Conread position: | 404-835 | 
| Cow position: | chr3:29391416-29390979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 173, 151 | 
| Conread position: | 404-835 | 
| Cow position: | chr3:50069317-50069728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 183, 66 | 
| Conread position: | 404-841 | 
| Cow position: | chr3:59588051-59588493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 11 | 
| Conread position: | 404-848 | 
| Cow position: | chr3:35852947-35852499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 227 | 
| Conread position: | 404-848 | 
| Cow position: | chr3:49327476-49327916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 126 | 
| Conread position: | 404-848 | 
| Cow position: | chr3:61191387-61190952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 94 | 
| Conread position: | 404-849 | 
| Cow position: | chr3:37040969-37041392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 385, 152 | 
| Conread position: | 404-850 | 
| Cow position: | chr3:2903768-2903319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 102 | 
| Conread position: | 404-850 | 
| Cow position: | chr3:5420346-5419885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 404-850 | 
| Cow position: | chr3:43528708-43528262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 342 | 
| Conread position: | 404-850 | 
| Cow position: | chr3:75479548-75479977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 385, 84 | 
| Conread position: | 404-850 | 
| Cow position: | chr3:80564485-80564940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 18 | 
| Conread position: | 404-853 | 
| Cow position: | chr3:2537787-2538234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 298, 64 | 
| Conread position: | 404-856 | 
| Cow position: | chr3:2035828-2036279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 89 | 
| Conread position: | 404-856 | 
| Cow position: | chr3:22089752-22089297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 54 | 
| Conread position: | 404-856 | 
| Cow position: | chr3:47272181-47271719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 5 | 
| Conread position: | 404-856 | 
| Cow position: | chr3:79208459-79208006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 274, 74 | 
| Conread position: | 404-857 | 
| Cow position: | chr3:6078806-6078347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 397 | 
| Conread position: | 404-857 | 
| Cow position: | chr3:15954547-15954104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 133 | 
| Conread position: | 404-857 | 
| Cow position: | chr3:52017289-52017752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 203 | 
| Conread position: | 404-857 | 
| Cow position: | chr3:65325852-65325389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 402 | 
| Conread position: | 404-857 | 
| Cow position: | chr3:67929741-67929279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 5 | 
| Conread position: | 404-861 | 
| Cow position: | chr3:14626627-14626171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 224 | 
| Conread position: | 404-868 | 
| Cow position: | chr3:57789176-57789625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 39, 84 | 
| Conread position: | 404-869 | 
| Cow position: | chr3:70566209-70565738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 413 | 
| Conread position: | 404-869 | 
| Cow position: | chr3:77496346-77496822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 164 | 
| Conread position: | 405-597 | 
| Cow position: | chr3:524659-524853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 168, 123 | 
| Conread position: | 405-599 | 
| Cow position: | chr3:78646786-78646994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 405-688 | 
| Cow position: | chr3:6799481-6799184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 53, 164 | 
| Conread position: | 405-688 | 
| Cow position: | chr3:18986009-18986295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 60, 227 | 
| Conread position: | 405-702 | 
| Cow position: | chr3:76000260-75999960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 405-702 | 
| Cow position: | chr3:81374553-81374254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 248 | 
| Conread position: | 405-707 | 
| Cow position: | chr3:34115200-34114914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 405-718 | 
| Cow position: | chr3:3884496-3884175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 168, 217 | 
| Conread position: | 405-735 | 
| Cow position: | chr3:26669581-26669240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 26, 167 | 
| Conread position: | 405-736 | 
| Cow position: | chr3:5536378-5536042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 59, 98 | 
| Conread position: | 405-736 | 
| Cow position: | chr3:16115098-16115429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 57, 158 | 
| Conread position: | 405-742 | 
| Cow position: | chr3:19797404-19797060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 77, 67 | 
| Conread position: | 405-757 | 
| Cow position: | chr3:72174317-72173957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 77, 67 | 
| Conread position: | 405-759 | 
| Cow position: | chr3:44335085-44335445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 331 | 
| Conread position: | 405-759 | 
| Cow position: | chr3:75997188-75996833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 172, 270 | 
| Conread position: | 405-760 | 
| Cow position: | chr3:13274848-13274485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 0 | 
| Conread position: | 405-760 | 
| Cow position: | chr3:17865127-17865480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 81 | 
| Conread position: | 405-760 | 
| Cow position: | chr3:24350660-24351012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 262 | 
| Conread position: | 405-763 | 
| Cow position: | chr3:67783095-67782734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 218 | 
| Conread position: | 405-768 | 
| Cow position: | chr3:26638653-26639026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 405-791 | 
| Cow position: | chr3:48530169-48530566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 15 | 
| Conread position: | 405-827 | 
| Cow position: | chr3:59473647-59474077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 10 | 
| Conread position: | 405-831 | 
| Cow position: | chr3:61169329-61169755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 270, 83 | 
| Conread position: | 405-850 | 
| Cow position: | chr3:23169540-23169089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 336 | 
| Conread position: | 405-853 | 
| Cow position: | chr3:54959729-54960167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 82 | 
| Conread position: | 406-600 | 
| Cow position: | chr3:74407885-74408078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 171, 17 | 
| Conread position: | 406-622 | 
| Cow position: | chr3:34041095-34041314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 76, 66 | 
| Conread position: | 406-646 | 
| Cow position: | chr3:7942835-7942590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 52, 9 | 
| Conread position: | 406-732 | 
| Cow position: | chr3:21302900-21302571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 276 | 
| Conread position: | 406-732 | 
| Cow position: | chr3:68682470-68682130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 406-735 | 
| Cow position: | chr3:33633345-33633027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 173, 75 | 
| Conread position: | 406-736 | 
| Cow position: | chr3:66738297-66738641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 55, 223 | 
| Conread position: | 406-742 | 
| Cow position: | chr3:79075055-79074711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 7, 67 | 
| Conread position: | 406-756 | 
| Cow position: | chr3:76173131-76172774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 246 | 
| Conread position: | 406-757 | 
| Cow position: | chr3:31147173-31147532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 76, 66 | 
| Conread position: | 406-759 | 
| Cow position: | chr3:65273867-65273509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 160 | 
| Conread position: | 406-768 | 
| Cow position: | chr3:68696275-68695908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 53, 63 | 
| Conread position: | 406-806 | 
| Cow position: | chr3:7678193-7678605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 75, 156 | 
| Conread position: | 406-850 | 
| Cow position: | chr3:26219529-26219077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 39 | 
| Conread position: | 407-584 | 
| Cow position: | chr3:6882828-6883013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 407-586 | 
| Cow position: | chr3:74879126-74878950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 169, 116 | 
| Conread position: | 407-594 | 
| Cow position: | chr3:69779626-69779439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 170, 32 | 
| Conread position: | 407-666 | 
| Cow position: | chr3:13084838-13084579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 171, 151 | 
| Conread position: | 407-776 | 
| Cow position: | chr3:73962147-73961775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 33 | 
| Conread position: | 407-789 | 
| Cow position: | chr3:20129480-20129862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 86 | 
| Conread position: | 407-803 | 
| Cow position: | chr3:28675521-28675923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 0 | 
| Conread position: | 407-810 | 
| Cow position: | chr3:2482990-2483387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 63 | 
| Conread position: | 407-832 | 
| Cow position: | chr3:3031933-3032365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 264, 210 | 
| Conread position: | 408-575 | 
| Cow position: | chr3:54506315-54506481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 408-597 | 
| Cow position: | chr3:73936500-73936300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 408-600 | 
| Cow position: | chr3:42595267-42595070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 52, 135 | 
| Conread position: | 408-602 | 
| Cow position: | chr3:9590854-9590653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 65, 81 | 
| Conread position: | 408-624 | 
| Cow position: | chr3:11961781-11961999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 54, 93 | 
| Conread position: | 408-646 | 
| Cow position: | chr3:67275417-67275171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 54, 109 | 
| Conread position: | 408-651 | 
| Cow position: | chr3:68379311-68379557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 81, 68 | 
| Conread position: | 408-662 | 
| Cow position: | chr3:56576123-56575860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 408-677 | 
| Cow position: | chr3:47518998-47519271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 50, 44 | 
| Conread position: | 408-677 | 
| Cow position: | chr3:53568493-53568763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 58, 172 | 
| Conread position: | 408-677 | 
| Cow position: | chr3:56153972-56154246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 54, 112 | 
| Conread position: | 408-683 | 
| Cow position: | chr3:62785046-62784769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 57, 92 | 
| Conread position: | 408-702 | 
| Cow position: | chr3:62820427-62820721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 50, 149 | 
| Conread position: | 408-712 | 
| Cow position: | chr3:70701526-70701834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 54, 264 | 
| Conread position: | 408-731 | 
| Cow position: | chr3:59668298-59668627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 60, 220 | 
| Conread position: | 408-735 | 
| Cow position: | chr3:48370664-48370998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 87, 95 | 
| Conread position: | 408-735 | 
| Cow position: | chr3:75164366-75164048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 54, 173 | 
| Conread position: | 408-736 | 
| Cow position: | chr3:51255294-51255651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 408-737 | 
| Cow position: | chr3:3776572-3776903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 28 | 
| Conread position: | 408-737 | 
| Cow position: | chr3:40231462-40231798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 53, 85 | 
| Conread position: | 408-740 | 
| Cow position: | chr3:72530711-72531054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 56, 85 | 
| Conread position: | 408-741 | 
| Cow position: | chr3:24531365-24531701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 53, 154 | 
| Conread position: | 408-790 | 
| Cow position: | chr3:14830557-14830173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 266 | 
| Conread position: | 408-813 | 
| Cow position: | chr3:82359555-82359986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 315 | 
| Conread position: | 408-819 | 
| Cow position: | chr3:76188224-76188636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 52, 91 | 
| Conread position: | 409-602 | 
| Cow position: | chr3:16333114-16333307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 409-728 | 
| Cow position: | chr3:42461221-42461556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 409-728 | 
| Cow position: | chr3:45184305-45183992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 409-730 | 
| Cow position: | chr3:21963678-21963351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 11, 21 | 
| Conread position: | 409-736 | 
| Cow position: | chr3:54789510-54789834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 74, 89 | 
| Conread position: | 409-738 | 
| Cow position: | chr3:57022111-57022437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 211 | 
| Conread position: | 409-742 | 
| Cow position: | chr3:14213087-14213425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 73, 18 | 
| Conread position: | 409-744 | 
| Cow position: | chr3:50329545-50329203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 409-759 | 
| Cow position: | chr3:31022369-31022720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 73, 63 | 
| Conread position: | 409-768 | 
| Cow position: | chr3:30615245-30614886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 73, 63 | 
| Conread position: | 409-789 | 
| Cow position: | chr3:3954027-3954413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 219 | 
| Conread position: | 409-789 | 
| Cow position: | chr3:18887113-18887507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 384 | 
| Conread position: | 409-814 | 
| Cow position: | chr3:38346733-38347138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 33 | 
| Conread position: | 409-821 | 
| Cow position: | chr3:59691439-59691846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 89 | 
| Conread position: | 409-824 | 
| Cow position: | chr3:44623377-44622932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 55, 33 | 
| Conread position: | 409-826 | 
| Cow position: | chr3:43658186-43657750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 21, 96 | 
| Conread position: | 409-826 | 
| Cow position: | chr3:77226849-77227279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 163 | 
| Conread position: | 409-835 | 
| Cow position: | chr3:15058075-15057646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 165, 67 | 
| Conread position: | 409-839 | 
| Cow position: | chr3:68342726-68342289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 257 | 
| Conread position: | 409-849 | 
| Cow position: | chr3:7857887-7858344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 104 | 
| Conread position: | 409-889 | 
| Cow position: | chr3:29887890-29887407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 330 | 
| Conread position: | 410-659 | 
| Cow position: | chr3:58971432-58971674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 71, 115 | 
| Conread position: | 410-688 | 
| Cow position: | chr3:56203208-56202926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 48, 118 | 
| Conread position: | 410-789 | 
| Cow position: | chr3:53903718-53904096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 275 | 
| Conread position: | 410-839 | 
| Cow position: | chr3:20471835-20471394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 72, 223 | 
| Conread position: | 410-843 | 
| Cow position: | chr3:55039887-55039439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 0 | 
| Conread position: | 410-856 | 
| Cow position: | chr3:61678224-61678685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 290 | 
| Conread position: | 411-621 | 
| Cow position: | chr3:80444802-80444589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 166, 0 | 
| Conread position: | 411-622 | 
| Cow position: | chr3:10244853-10245067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 411-627 | 
| Cow position: | chr3:4503778-4503989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 411-736 | 
| Cow position: | chr3:13195343-13195673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 71, 24 | 
| Conread position: | 411-738 | 
| Cow position: | chr3:47737355-47737023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 53, 36 | 
| Conread position: | 411-742 | 
| Cow position: | chr3:58026980-58026642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 411-746 | 
| Cow position: | chr3:77696796-77696456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 411-757 | 
| Cow position: | chr3:68717007-68716652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 411-823 | 
| Cow position: | chr3:2630331-2630749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 278 | 
| Conread position: | 411-828 | 
| Cow position: | chr3:11410566-11410138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 150 | 
| Conread position: | 412-621 | 
| Cow position: | chr3:49674339-49674543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 161, 81 | 
| Conread position: | 412-759 | 
| Cow position: | chr3:65391557-65391916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 166, 216 | 
| Conread position: | 412-760 | 
| Cow position: | chr3:32485285-32485640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 70, 60 | 
| Conread position: | 412-769 | 
| Cow position: | chr3:63703739-63704082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 41, 62 | 
| Conread position: | 412-781 | 
| Cow position: | chr3:12011987-12012357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 167, 123 | 
| Conread position: | 412-784 | 
| Cow position: | chr3:60054515-60054895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 162, 55 | 
| Conread position: | 412-789 | 
| Cow position: | chr3:5495958-5495578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 165, 9 | 
| Conread position: | 412-814 | 
| Cow position: | chr3:53588862-53588441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 52, 274 | 
| Conread position: | 413-588 | 
| Cow position: | chr3:48275337-48275511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 413-699 | 
| Cow position: | chr3:60701558-60701263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 413-722 | 
| Cow position: | chr3:24909696-24910011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 52, 168 | 
| Conread position: | 413-728 | 
| Cow position: | chr3:7739507-7739182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 45, 261 | 
| Conread position: | 413-759 | 
| Cow position: | chr3:28358061-28357707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 0 | 
| Conread position: | 413-760 | 
| Cow position: | chr3:31422408-31422063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 275 | 
| Conread position: | 413-781 | 
| Cow position: | chr3:81371194-81371554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 268 | 
| Conread position: | 413-806 | 
| Cow position: | chr3:82460704-82461115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 141 | 
| Conread position: | 413-835 | 
| Cow position: | chr3:48362622-48363039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 57 | 
| Conread position: | 414-605 | 
| Cow position: | chr3:8752245-8752440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 44, 169 | 
| Conread position: | 414-760 | 
| Cow position: | chr3:3301665-3302017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 46, 69 | 
| Conread position: | 414-801 | 
| Cow position: | chr3:57577238-57577629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 134 | 
| Conread position: | 414-814 | 
| Cow position: | chr3:50614178-50614582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 49, 197 | 
| Conread position: | 414-831 | 
| Cow position: | chr3:75710852-75711271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 214 | 
| Conread position: | 415-625 | 
| Cow position: | chr3:5405698-5405481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 415-688 | 
| Cow position: | chr3:40979389-40979670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 46, 213 | 
| Conread position: | 415-762 | 
| Cow position: | chr3:58951161-58951511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 0 | 
| Conread position: | 415-814 | 
| Cow position: | chr3:49454773-49455183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 5 | 
| Conread position: | 415-824 | 
| Cow position: | chr3:6873716-6873293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 57, 17 | 
| Conread position: | 415-825 | 
| Cow position: | chr3:47284376-47284790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 183 | 
| Conread position: | 415-829 | 
| Cow position: | chr3:66374869-66375278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 317, 161 | 
| Conread position: | 416-780 | 
| Cow position: | chr3:37486249-37485870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 43, 244 | 
| Conread position: | 417-681 | 
| Cow position: | chr3:26833084-26832827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 417-810 | 
| Cow position: | chr3:59630964-59630561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 299 | 
| Conread position: | 418-735 | 
| Cow position: | chr3:62824946-62824620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 52, 87 | 
| Conread position: | 419-728 | 
| Cow position: | chr3:19690115-19689798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 421-625 | 
| Cow position: | chr3:65079374-65079168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 155, 111 | 
| Conread position: | 421-807 | 
| Cow position: | chr3:60174935-60174544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 41, 276 | 
| Conread position: | 421-832 | 
| Cow position: | chr3:41367436-41367024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 68 | 
| Conread position: | 421-849 | 
| Cow position: | chr3:14262941-14263370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 311, 388 | 
| Conread position: | 423-602 | 
| Cow position: | chr3:25057703-25057882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 423-623 | 
| Cow position: | chr3:61174865-61175062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 92, 68 | 
| Conread position: | 423-676 | 
| Cow position: | chr3:69496219-69495967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 157, 65 | 
| Conread position: | 423-682 | 
| Cow position: | chr3:4120412-4120666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 155, 59 | 
| Conread position: | 423-708 | 
| Cow position: | chr3:52486830-52487118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 0 | 
| Conread position: | 423-736 | 
| Cow position: | chr3:73812382-73812704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 57, 145 | 
| Conread position: | 423-742 | 
| Cow position: | chr3:9676790-9676479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 155, 32 | 
| Conread position: | 423-742 | 
| Cow position: | chr3:18932987-18933313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 59, 49 | 
| Conread position: | 423-773 | 
| Cow position: | chr3:52225136-52225496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 59, 49 | 
| Conread position: | 423-810 | 
| Cow position: | chr3:22872502-22872106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 63 | 
| Conread position: | 423-810 | 
| Cow position: | chr3:23476550-23476943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 53, 126 | 
| Conread position: | 423-831 | 
| Cow position: | chr3:55733491-55733907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 194 | 
| Conread position: | 423-835 | 
| Cow position: | chr3:59798801-59799212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 20, 248 | 
| Conread position: | 423-854 | 
| Cow position: | chr3:18279885-18279445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 423-857 | 
| Cow position: | chr3:4457526-4457090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 110 | 
| Conread position: | 424-592 | 
| Cow position: | chr3:77550667-77550835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 39, 153 | 
| Conread position: | 424-736 | 
| Cow position: | chr3:60389194-60389499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 108 | 
| Conread position: | 424-736 | 
| Cow position: | chr3:70753911-70754233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 424-757 | 
| Cow position: | chr3:31023035-31023375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 150, 98 | 
| Conread position: | 424-759 | 
| Cow position: | chr3:3289340-3289676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 31, 37 | 
| Conread position: | 424-789 | 
| Cow position: | chr3:18393833-18393471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 93 | 
| Conread position: | 424-789 | 
| Cow position: | chr3:42452059-42452431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 0 | 
| Conread position: | 424-789 | 
| Cow position: | chr3:50922118-50922487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 154, 73 | 
| Conread position: | 425-681 | 
| Cow position: | chr3:41679844-41680104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 148, 81 | 
| Conread position: | 425-742 | 
| Cow position: | chr3:7696569-7696893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 57, 47 | 
| Conread position: | 425-746 | 
| Cow position: | chr3:30859317-30859646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 57, 47 | 
| Conread position: | 425-757 | 
| Cow position: | chr3:17100435-17100105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 57, 47 | 
| Conread position: | 425-789 | 
| Cow position: | chr3:47978253-47978626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 229 | 
| Conread position: | 426-742 | 
| Cow position: | chr3:21155156-21155479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 56, 46 | 
| Conread position: | 426-825 | 
| Cow position: | chr3:522272-522659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 53, 204 | 
| Conread position: | 426-827 | 
| Cow position: | chr3:46350193-46350629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 430 | 
| Conread position: | 426-835 | 
| Cow position: | chr3:57457360-57457762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 44 | 
| Conread position: | 427-731 | 
| Cow position: | chr3:36728498-36728809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 55, 45 | 
| Conread position: | 427-742 | 
| Cow position: | chr3:37599864-37599549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 291 | 
| Conread position: | 427-754 | 
| Cow position: | chr3:12671143-12670814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 266 | 
| Conread position: | 427-810 | 
| Cow position: | chr3:80581231-80581605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 317, 23 | 
| Conread position: | 427-814 | 
| Cow position: | chr3:37186388-37186771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 34, 75 | 
| Conread position: | 428-605 | 
| Cow position: | chr3:25090443-25090628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 37, 126 | 
| Conread position: | 428-742 | 
| Cow position: | chr3:35789027-35789340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 146, 188 | 
| Conread position: | 429-587 | 
| Cow position: | chr3:77005033-77005194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 147, 0 | 
| Conread position: | 429-780 | 
| Cow position: | chr3:68259440-68259802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 432-742 | 
| Cow position: | chr3:67264513-67264830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 50, 40 | 
| Conread position: | 432-757 | 
| Cow position: | chr3:46128413-46128080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 50, 40 | 
| Conread position: | 432-758 | 
| Cow position: | chr3:18111427-18111093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 50, 40 | 
| Conread position: | 432-759 | 
| Cow position: | chr3:10050625-10050961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 23, 37 | 
| Conread position: | 432-760 | 
| Cow position: | chr3:7360263-7359927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 141, 195 | 
| Conread position: | 432-825 | 
| Cow position: | chr3:61839848-61840233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 243 | 
| Conread position: | 432-825 | 
| Cow position: | chr3:79292387-79292783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 40 | 
| Conread position: | 433-675 | 
| Cow position: | chr3:80469093-80468847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 143, 177 | 
| Conread position: | 433-731 | 
| Cow position: | chr3:46349830-46350135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 49, 39 | 
| Conread position: | 433-735 | 
| Cow position: | chr3:24823527-24823841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 28, 133 | 
| Conread position: | 433-736 | 
| Cow position: | chr3:59608060-59608371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 29, 195 | 
| Conread position: | 433-742 | 
| Cow position: | chr3:36374222-36374535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 49, 39 | 
| Conread position: | 433-760 | 
| Cow position: | chr3:48605255-48605589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 75, 10 | 
| Conread position: | 433-789 | 
| Cow position: | chr3:77565037-77565391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 55, 193 | 
| Conread position: | 433-850 | 
| Cow position: | chr3:80740141-80740541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 28, 137 | 
| Conread position: | 434-588 | 
| Cow position: | chr3:78895044-78894889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 434-789 | 
| Cow position: | chr3:55117409-55117048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 74 | 
| Conread position: | 434-823 | 
| Cow position: | chr3:79220409-79220808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 88 | 
| Conread position: | 435-561 | 
| Cow position: | chr3:1889949-1889823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 435-821 | 
| Cow position: | chr3:27285789-27286183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 140 | 
| Conread position: | 436-688 | 
| Cow position: | chr3:54346667-54346411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 9, 5 | 
| Conread position: | 436-735 | 
| Cow position: | chr3:35029542-35029232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 26, 114 | 
| Conread position: | 436-746 | 
| Cow position: | chr3:49768875-49769193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 46, 36 | 
| Conread position: | 437-828 | 
| Cow position: | chr3:57554280-57553894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 5 | 
| Conread position: | 437-834 | 
| Cow position: | chr3:74088599-74088203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 167 | 
| Conread position: | 438-600 | 
| Cow position: | chr3:20488546-20488712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 20, 31 | 
| Conread position: | 440-825 | 
| Cow position: | chr3:59001175-59000797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 64 | 
| Conread position: | 443-760 | 
| Cow position: | chr3:24939651-24939337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 130, 65 | 
| Conread position: | 444-600 | 
| Cow position: | chr3:64683100-64682938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 444-657 | 
| Cow position: | chr3:56302056-56301838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 54 | 
| Conread position: | 444-736 | 
| Cow position: | chr3:41818523-41818228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 21, 179 | 
| Conread position: | 444-737 | 
| Cow position: | chr3:52148106-52147811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 69 | 
| Conread position: | 444-768 | 
| Cow position: | chr3:72663041-72663364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 235, 133 | 
| Conread position: | 444-789 | 
| Cow position: | chr3:31056433-31056082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 297 | 
| Conread position: | 444-823 | 
| Cow position: | chr3:31047371-31046999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 28 | 
| Conread position: | 444-850 | 
| Cow position: | chr3:20803058-20802646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 9 | 
| Conread position: | 445-602 | 
| Cow position: | chr3:12668419-12668580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 445-617 | 
| Cow position: | chr3:34973452-34973277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 37, 27 | 
| Conread position: | 445-825 | 
| Cow position: | chr3:83490654-83491040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 6, 55 | 
| Conread position: | 445-850 | 
| Cow position: | chr3:49792983-49793370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 174 | 
| Conread position: | 446-597 | 
| Cow position: | chr3:39398165-39398011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 36, 26 | 
| Conread position: | 446-742 | 
| Cow position: | chr3:30989360-30989057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 36, 26 | 
| Conread position: | 446-757 | 
| Cow position: | chr3:77753666-77753984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 36, 26 | 
| Conread position: | 446-760 | 
| Cow position: | chr3:83761586-83761269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 116, 250 | 
| Conread position: | 446-820 | 
| Cow position: | chr3:46341029-46341414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 307 | 
| Conread position: | 447-742 | 
| Cow position: | chr3:27674294-27673993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 35, 25 | 
| Conread position: | 448-742 | 
| Cow position: | chr3:14863632-14863331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 34, 24 | 
| Conread position: | 448-789 | 
| Cow position: | chr3:8148090-8147751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 178 | 
| Conread position: | 449-731 | 
| Cow position: | chr3:23072108-23072396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 449-742 | 
| Cow position: | chr3:48059848-48059548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 33, 23 | 
| Conread position: | 449-768 | 
| Cow position: | chr3:44536018-44535700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 20, 35 | 
| Conread position: | 449-856 | 
| Cow position: | chr3:29891837-29891429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 15, 70 | 
| Conread position: | 450-825 | 
| Cow position: | chr3:26903692-26904064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 334 | 
| Conread position: | 452-811 | 
| Cow position: | chr3:72675665-72676034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 86 | 
| Conread position: | 452-821 | 
| Cow position: | chr3:75728012-75727631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 453-742 | 
| Cow position: | chr3:48043025-48043322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 29, 202 | 
| Conread position: | 453-757 | 
| Cow position: | chr3:4289118-4289432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 20, 144 | 
| Conread position: | 454-802 | 
| Cow position: | chr3:15955123-15955483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 455-850 | 
| Cow position: | chr3:5851347-5850955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 167 | 
| Conread position: | 455-853 | 
| Cow position: | chr3:17695423-17695025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 282 | 
| Conread position: | 456-768 | 
| Cow position: | chr3:48574157-48573840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 123, 11 | 
| Conread position: | 456-850 | 
| Cow position: | chr3:21341382-21340984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 152 | 
| Conread position: | 460-786 | 
| Cow position: | chr3:34526059-34525725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 116, 157 | 
| Conread position: | 460-832 | 
| Cow position: | chr3:4461901-4461531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 7 | 
| Conread position: | 461-693 | 
| Cow position: | chr3:77892357-77892122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 462-735 | 
| Cow position: | chr3:58865885-58865597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 113, 256 | 
| Conread position: | 462-740 | 
| Cow position: | chr3:39554726-39554453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 116, 84 | 
| Conread position: | 464-688 | 
| Cow position: | chr3:17885274-17885501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 464-804 | 
| Cow position: | chr3:11026514-11026854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 213 | 
| Conread position: | 468-789 | 
| Cow position: | chr3:16004391-16004073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 94 | 
| Conread position: | 468-821 | 
| Cow position: | chr3:39328005-39328347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 154 | 
| Conread position: | 468-835 | 
| Cow position: | chr3:20663945-20663570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 239 | 
| Conread position: | 469-827 | 
| Cow position: | chr3:13899859-13899488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 470-669 | 
| Cow position: | chr3:70839501-70839696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 119, 69 | 
| Conread position: | 471-622 | 
| Cow position: | chr3:33021237-33021391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 11, 152 | 
| Conread position: | 471-732 | 
| Cow position: | chr3:6092984-6092730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 472-742 | 
| Cow position: | chr3:5362026-5361748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 10, 183 | 
| Conread position: | 472-742 | 
| Cow position: | chr3:36802459-36802181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 10, 183 | 
| Conread position: | 472-742 | 
| Cow position: | chr3:49531022-49530744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 10, 183 | 
| Conread position: | 472-742 | 
| Cow position: | chr3:49948554-49948832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 10, 183 | 
| Conread position: | 472-742 | 
| Cow position: | chr3:68631758-68631480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 10, 183 | 
| Conread position: | 473-657 | 
| Cow position: | chr3:24352484-24352666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 58, 111 | 
| Conread position: | 473-723 | 
| Cow position: | chr3:17680762-17681017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 106, 53 | 
| Conread position: | 474-742 | 
| Cow position: | chr3:30609701-30609425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 8, 181 | 
| Conread position: | 477-602 | 
| Cow position: | chr3:73394476-73394604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 477-616 | 
| Cow position: | chr3:50347601-50347738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 20, 83 | 
| Conread position: | 477-631 | 
| Cow position: | chr3:35073956-35074113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 99, 146 | 
| Conread position: | 477-660 | 
| Cow position: | chr3:53091125-53091311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 101, 21 | 
| Conread position: | 477-672 | 
| Cow position: | chr3:83845211-83845411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 477-719 | 
| Cow position: | chr3:29171986-29172227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 14 | 
| Conread position: | 477-729 | 
| Cow position: | chr3:43245900-43245642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 106, 36 | 
| Conread position: | 477-735 | 
| Cow position: | chr3:70840542-70840282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 104, 47 | 
| Conread position: | 477-736 | 
| Cow position: | chr3:36174474-36174206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 477-736 | 
| Cow position: | chr3:38255411-38255666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 68, 72 | 
| Conread position: | 477-736 | 
| Cow position: | chr3:51147062-51146798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 116, 57 | 
| Conread position: | 477-737 | 
| Cow position: | chr3:1498475-1498739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 102, 43 | 
| Conread position: | 477-737 | 
| Cow position: | chr3:15571260-15571519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 102, 21 | 
| Conread position: | 477-737 | 
| Cow position: | chr3:43105173-43105437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 10, 220 | 
| Conread position: | 477-737 | 
| Cow position: | chr3:55107505-55107240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 101, 11 | 
| Conread position: | 477-742 | 
| Cow position: | chr3:55417565-55417293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 95, 177 | 
| Conread position: | 477-783 | 
| Cow position: | chr3:80818337-80818640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 22, 99 | 
| Conread position: | 477-813 | 
| Cow position: | chr3:49119430-49119082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 477-823 | 
| Cow position: | chr3:19708495-19708150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 114 | 
| Conread position: | 477-850 | 
| Cow position: | chr3:67161538-67161918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 91 | 
| Conread position: | 478-587 | 
| Cow position: | chr3:23037990-23037879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 478-603 | 
| Cow position: | chr3:76138043-76138171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 478-615 | 
| Cow position: | chr3:14614000-14614140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 478-623 | 
| Cow position: | chr3:12750626-12750769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 478-641 | 
| Cow position: | chr3:84597599-84597434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 88, 144 | 
| Conread position: | 478-657 | 
| Cow position: | chr3:30355828-30356009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 95, 144 | 
| Conread position: | 478-675 | 
| Cow position: | chr3:26980959-26981154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 478-688 | 
| Cow position: | chr3:60618229-60618444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 478-731 | 
| Cow position: | chr3:36230167-36230421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 99, 222 | 
| Conread position: | 478-731 | 
| Cow position: | chr3:68357769-68357513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 101, 203 | 
| Conread position: | 478-735 | 
| Cow position: | chr3:40101068-40100808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 100, 69 | 
| Conread position: | 478-737 | 
| Cow position: | chr3:68302931-68303197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 478-742 | 
| Cow position: | chr3:55246221-55246492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 96, 176 | 
| Conread position: | 478-742 | 
| Cow position: | chr3:67398227-67397955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 94, 177 | 
| Conread position: | 478-744 | 
| Cow position: | chr3:18179353-18179624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 98, 148 | 
| Conread position: | 478-752 | 
| Cow position: | chr3:9116513-9116783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 266, 141 | 
| Conread position: | 478-754 | 
| Cow position: | chr3:7338174-7337888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 137, 82 | 
| Conread position: | 478-757 | 
| Cow position: | chr3:28747986-28748275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 94, 176 | 
| Conread position: | 478-767 | 
| Cow position: | chr3:16752644-16752359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 144 | 
| Conread position: | 478-768 | 
| Cow position: | chr3:37020473-37020180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 94, 176 | 
| Conread position: | 478-768 | 
| Cow position: | chr3:64198084-64198381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 96, 117 | 
| Conread position: | 478-776 | 
| Cow position: | chr3:115824-116104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 266, 99 | 
| Conread position: | 478-780 | 
| Cow position: | chr3:42930068-42929760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 478-797 | 
| Cow position: | chr3:18715882-18715553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 478-810 | 
| Cow position: | chr3:13517553-13517218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 18, 172 | 
| Conread position: | 478-825 | 
| Cow position: | chr3:68586644-68586977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 269, 182 | 
| Conread position: | 478-835 | 
| Cow position: | chr3:64716626-64716988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 95, 117 | 
| Conread position: | 479-735 | 
| Cow position: | chr3:82473657-82473920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 97, 25 | 
| Conread position: | 479-736 | 
| Cow position: | chr3:75143427-75143168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 14 | 
| Conread position: | 479-745 | 
| Cow position: | chr3:68705016-68704744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 97, 226 | 
| Conread position: | 479-758 | 
| Cow position: | chr3:45986133-45986420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 95, 175 | 
| Conread position: | 479-760 | 
| Cow position: | chr3:68878106-68877819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 97, 177 | 
| Conread position: | 479-813 | 
| Cow position: | chr3:15662094-15661756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 230 | 
| Conread position: | 479-853 | 
| Cow position: | chr3:7408088-7408465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 99, 40 | 
| Conread position: | 480-736 | 
| Cow position: | chr3:34953259-34953522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 481-622 | 
| Cow position: | chr3:64749087-64749231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 481-825 | 
| Cow position: | chr3:49382558-49382904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 226 | 
| Conread position: | 482-789 | 
| Cow position: | chr3:8716854-8717169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 140 | 
| Conread position: | 483-712 | 
| Cow position: | chr3:21062383-21062621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 88, 15 | 
| Conread position: | 483-759 | 
| Cow position: | chr3:2594734-2595012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 90, 7 | 
| Conread position: | 483-813 | 
| Cow position: | chr3:46094438-46094777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 93, 25 | 
| Conread position: | 483-820 | 
| Cow position: | chr3:12712318-12711967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 485-760 | 
| Cow position: | chr3:10017724-10018007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 486-765 | 
| Cow position: | chr3:71257598-71257315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 86, 227 | 
| Conread position: | 486-769 | 
| Cow position: | chr3:31771307-31771595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 140 | 
| Conread position: | 486-774 | 
| Cow position: | chr3:18895393-18895690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 91, 140 | 
| Conread position: | 487-621 | 
| Cow position: | chr3:14627624-14627487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 487-732 | 
| Cow position: | chr3:37982506-37982261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 36, 18 | 
| Conread position: | 487-736 | 
| Cow position: | chr3:50461952-50462205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 10, 208 | 
| Conread position: | 487-736 | 
| Cow position: | chr3:54340797-54340546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 92, 19 | 
| Conread position: | 487-737 | 
| Cow position: | chr3:12979141-12979390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 200, 29 | 
| Conread position: | 487-760 | 
| Cow position: | chr3:23992846-23993132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 487-760 | 
| Cow position: | chr3:66136508-66136223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 89, 138 | 
| Conread position: | 487-777 | 
| Cow position: | chr3:31500967-31501256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 91, 76 | 
| Conread position: | 487-821 | 
| Cow position: | chr3:5365297-5365630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 89, 194 | 
| Conread position: | 487-822 | 
| Cow position: | chr3:69849890-69849552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 202 | 
| Conread position: | 487-850 | 
| Cow position: | chr3:74499852-74500217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 192, 78 | 
| Conread position: | 487-855 | 
| Cow position: | chr3:63945363-63944988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 77, 6 | 
| Conread position: | 488-622 | 
| Cow position: | chr3:22196671-22196534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 488-623 | 
| Cow position: | chr3:67388792-67388930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 488-627 | 
| Cow position: | chr3:37646676-37646818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 488-677 | 
| Cow position: | chr3:4344205-4344398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 87, 167 | 
| Conread position: | 488-731 | 
| Cow position: | chr3:470323-470073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 84, 166 | 
| Conread position: | 488-731 | 
| Cow position: | chr3:73732466-73732225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 87, 155 | 
| Conread position: | 488-740 | 
| Cow position: | chr3:35433149-35433406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 86, 59 | 
| Conread position: | 488-742 | 
| Cow position: | chr3:2874889-2874626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 488-742 | 
| Cow position: | chr3:44352343-44352604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 84, 166 | 
| Conread position: | 488-757 | 
| Cow position: | chr3:73393666-73393396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 86, 165 | 
| Conread position: | 488-758 | 
| Cow position: | chr3:24166177-24166449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 136, 84 | 
| Conread position: | 488-768 | 
| Cow position: | chr3:7959999-7959715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 86, 166 | 
| Conread position: | 488-773 | 
| Cow position: | chr3:5117043-5117336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 488-791 | 
| Cow position: | chr3:20137240-20136925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 92, 307 | 
| Conread position: | 488-849 | 
| Cow position: | chr3:56582460-56582815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 301, 59 | 
| Conread position: | 489-623 | 
| Cow position: | chr3:78559753-78559616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 489-743 | 
| Cow position: | chr3:42187266-42187526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 84, 171 | 
| Conread position: | 490-781 | 
| Cow position: | chr3:13291498-13291798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 89, 165 | 
| Conread position: | 490-857 | 
| Cow position: | chr3:53593084-53592708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 137 | 
| Conread position: | 491-789 | 
| Cow position: | chr3:68146208-68145925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 85, 61 | 
| Conread position: | 491-821 | 
| Cow position: | chr3:7763285-7763609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 27 | 
| Conread position: | 491-833 | 
| Cow position: | chr3:5064709-5065055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 86, 209 | 
| Conread position: | 491-834 | 
| Cow position: | chr3:23286193-23285843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 158, 132 | 
| Conread position: | 491-856 | 
| Cow position: | chr3:11986947-11987309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 197 | 
| Conread position: | 491-865 | 
| Cow position: | chr3:72169104-72168727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 81, 224 | 
| Conread position: | 492-729 | 
| Cow position: | chr3:62272268-62272028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 16, 6 | 
| Conread position: | 492-736 | 
| Cow position: | chr3:62233644-62233398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 16, 6 | 
| Conread position: | 493-731 | 
| Cow position: | chr3:13470016-13469774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 84, 5 | 
| Conread position: | 493-731 | 
| Cow position: | chr3:28597246-28597006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 186, 13 | 
| Conread position: | 493-737 | 
| Cow position: | chr3:55301131-55300886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 84, 11 | 
| Conread position: | 493-766 | 
| Cow position: | chr3:58158834-58158569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 186, 74 | 
| Conread position: | 493-768 | 
| Cow position: | chr3:22511302-22511018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 493-825 | 
| Cow position: | chr3:53221646-53221970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 297, 74 | 
| Conread position: | 493-847 | 
| Cow position: | chr3:35283466-35283118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 185, 5 | 
| Conread position: | 494-731 | 
| Cow position: | chr3:38018081-38017842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 85, 148 | 
| Conread position: | 494-735 | 
| Cow position: | chr3:68291188-68291432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 85, 19 | 
| Conread position: | 494-789 | 
| Cow position: | chr3:79272171-79271882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 79, 137 | 
| Conread position: | 494-850 | 
| Cow position: | chr3:54782392-54782035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 149 | 
| Conread position: | 495-622 | 
| Cow position: | chr3:34151428-34151298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 495-731 | 
| Cow position: | chr3:6433916-6434156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 83, 32 | 
| Conread position: | 495-745 | 
| Cow position: | chr3:38252616-38252864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 83, 11 | 
| Conread position: | 495-757 | 
| Cow position: | chr3:5394348-5394080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 8, 16 | 
| Conread position: | 495-760 | 
| Cow position: | chr3:3651443-3651167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 78, 122 | 
| Conread position: | 495-797 | 
| Cow position: | chr3:40689333-40689025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 85, 47 | 
| Conread position: | 495-814 | 
| Cow position: | chr3:24934979-24935313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 80, 31 | 
| Conread position: | 495-814 | 
| Cow position: | chr3:59366171-59366500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 184, 36 | 
| Conread position: | 495-850 | 
| Cow position: | chr3:18066754-18067115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 243 | 
| Conread position: | 496-742 | 
| Cow position: | chr3:19977833-19977580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 76, 158 | 
| Conread position: | 497-669 | 
| Cow position: | chr3:26931267-26931092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 497-731 | 
| Cow position: | chr3:59604494-59604731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 76, 20 | 
| Conread position: | 498-688 | 
| Cow position: | chr3:35488525-35488331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 36, 31 | 
| Conread position: | 498-712 | 
| Cow position: | chr3:72058085-72058301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 74, 199 | 
| Conread position: | 498-742 | 
| Cow position: | chr3:859358-859609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 498-776 | 
| Cow position: | chr3:68514926-68514657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 73, 124 | 
| Conread position: | 498-779 | 
| Cow position: | chr3:78782597-78782871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 78, 138 | 
| Conread position: | 498-826 | 
| Cow position: | chr3:12675406-12675077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 117, 65 | 
| Conread position: | 498-856 | 
| Cow position: | chr3:4331980-4332345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 322 | 
| Conread position: | 498-856 | 
| Cow position: | chr3:49230638-49230998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 109 | 
| Conread position: | 498-857 | 
| Cow position: | chr3:49461314-49460945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 333 | 
| Conread position: | 499-693 | 
| Cow position: | chr3:65672529-65672728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 11, 157 | 
| Conread position: | 499-707 | 
| Cow position: | chr3:10411122-10410913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 78, 48 | 
| Conread position: | 499-797 | 
| Cow position: | chr3:31206497-31206801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 48 | 
| Conread position: | 500-698 | 
| Cow position: | chr3:73305735-73305936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 500-731 | 
| Cow position: | chr3:56375926-56376167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 500-745 | 
| Cow position: | chr3:79690879-79691120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 79, 108 | 
| Conread position: | 500-789 | 
| Cow position: | chr3:8159580-8159871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 77, 117 | 
| Conread position: | 500-830 | 
| Cow position: | chr3:22021346-22021016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 77, 46 | 
| Conread position: | 503-736 | 
| Cow position: | chr3:71488690-71488454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 12, 23 | 
| Conread position: | 504-623 | 
| Cow position: | chr3:58835440-58835318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 504-701 | 
| Cow position: | chr3:73926536-73926340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 73, 152 | 
| Conread position: | 504-738 | 
| Cow position: | chr3:36672375-36672133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 43 | 
| Conread position: | 504-789 | 
| Cow position: | chr3:62541943-62542233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 504-821 | 
| Cow position: | chr3:6853874-6853553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 83, 120 | 
| Conread position: | 505-691 | 
| Cow position: | chr3:21112990-21112803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 73, 48 | 
| Conread position: | 505-759 | 
| Cow position: | chr3:15786193-15786454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 505-823 | 
| Cow position: | chr3:31903480-31903160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 22, 118 | 
| Conread position: | 506-628 | 
| Cow position: | chr3:59621973-59621851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 73, 97 | 
| Conread position: | 506-688 | 
| Cow position: | chr3:66014036-66014222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 506-699 | 
| Cow position: | chr3:40630122-40629923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 506-735 | 
| Cow position: | chr3:37580693-37580451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 506-752 | 
| Cow position: | chr3:6193118-6192864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 66, 142 | 
| Conread position: | 506-789 | 
| Cow position: | chr3:56697570-56697861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 71, 120 | 
| Conread position: | 506-848 | 
| Cow position: | chr3:10346978-10347326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 307 | 
| Conread position: | 507-700 | 
| Cow position: | chr3:42885313-42885509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 507-736 | 
| Cow position: | chr3:58286265-58286034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 18, 70 | 
| Conread position: | 507-746 | 
| Cow position: | chr3:28879357-28879604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 65, 147 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:79905280-79905022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 69, 115 | 
| Conread position: | 507-789 | 
| Cow position: | chr3:16380945-16380656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 70, 119 | 
| Conread position: | 508-688 | 
| Cow position: | chr3:24763675-24763492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 508-736 | 
| Cow position: | chr3:65771681-65771446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 508-742 | 
| Cow position: | chr3:83479209-83479450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 64, 146 | 
| Conread position: | 508-757 | 
| Cow position: | chr3:75265140-75264883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 64, 146 | 
| Conread position: | 508-827 | 
| Cow position: | chr3:60597187-60597499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 45 | 
| Conread position: | 508-850 | 
| Cow position: | chr3:28908570-28908229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 69, 189 | 
| Conread position: | 508-852 | 
| Cow position: | chr3:53573117-53572776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 184 | 
| Conread position: | 509-822 | 
| Cow position: | chr3:79884852-79884528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 114 | 
| Conread position: | 510-731 | 
| Cow position: | chr3:59344880-59345109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 68, 21 | 
| Conread position: | 510-754 | 
| Cow position: | chr3:53429253-53429014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 106, 165 | 
| Conread position: | 510-819 | 
| Cow position: | chr3:5101125-5100817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 118 | 
| Conread position: | 510-832 | 
| Cow position: | chr3:59101475-59101787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 68, 33 | 
| Conread position: | 511-760 | 
| Cow position: | chr3:30531597-30531847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 69, 40 | 
| Conread position: | 511-835 | 
| Cow position: | chr3:58969252-58968939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 65, 32 | 
| Conread position: | 511-848 | 
| Cow position: | chr3:55190109-55189782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 155, 23 | 
| Conread position: | 511-850 | 
| Cow position: | chr3:22676443-22676121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 234, 133 | 
| Conread position: | 512-768 | 
| Cow position: | chr3:54495700-54495964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 60, 142 | 
| Conread position: | 512-831 | 
| Cow position: | chr3:66708433-66708111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 87, 10 | 
| Conread position: | 513-759 | 
| Cow position: | chr3:43028739-43028489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 18, 10 | 
| Conread position: | 513-802 | 
| Cow position: | chr3:34096311-34096018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 65, 69 | 
| Conread position: | 514-813 | 
| Cow position: | chr3:20438022-20437708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 58, 124 | 
| Conread position: | 517-848 | 
| Cow position: | chr3:72018765-72019091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 91 | 
| Conread position: | 518-789 | 
| Cow position: | chr3:7475779-7475504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 9, 61 | 
| Conread position: | 519-684 | 
| Cow position: | chr3:69766592-69766425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 59, 103 | 
| Conread position: | 519-743 | 
| Cow position: | chr3:32363929-32363697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 519-758 | 
| Cow position: | chr3:36595499-36595746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 53, 135 | 
| Conread position: | 519-760 | 
| Cow position: | chr3:25666112-25666348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 57, 157 | 
| Conread position: | 519-781 | 
| Cow position: | chr3:53149970-53150237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 59, 206 | 
| Conread position: | 519-789 | 
| Cow position: | chr3:51604963-51604687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 261 | 
| Conread position: | 519-826 | 
| Cow position: | chr3:53270464-53270785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 57 | 
| Conread position: | 519-856 | 
| Cow position: | chr3:68647804-68648145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 271 | 
| Conread position: | 520-669 | 
| Cow position: | chr3:55319111-55319263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 520-742 | 
| Cow position: | chr3:37637331-37637102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 54, 134 | 
| Conread position: | 520-758 | 
| Cow position: | chr3:79921446-79921200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 52, 134 | 
| Conread position: | 520-769 | 
| Cow position: | chr3:65019977-65020233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 520-826 | 
| Cow position: | chr3:17952301-17952613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 187 | 
| Conread position: | 520-858 | 
| Cow position: | chr3:13117992-13118324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 58, 90 | 
| Conread position: | 521-701 | 
| Cow position: | chr3:11031300-11031111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 521-756 | 
| Cow position: | chr3:70449993-70450236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 521-789 | 
| Cow position: | chr3:67022208-67022482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 10, 238 | 
| Conread position: | 521-835 | 
| Cow position: | chr3:67544228-67543903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 61, 303 | 
| Conread position: | 522-760 | 
| Cow position: | chr3:5456598-5456354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 523-713 | 
| Cow position: | chr3:66805418-66805609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 57, 67 | 
| Conread position: | 523-722 | 
| Cow position: | chr3:41053464-41053663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 55, 24 | 
| Conread position: | 523-789 | 
| Cow position: | chr3:12323716-12323991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 55, 84 | 
| Conread position: | 523-789 | 
| Cow position: | chr3:15081091-15080829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 57, 169 | 
| Conread position: | 523-824 | 
| Cow position: | chr3:61361065-61361359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 213, 86 | 
| Conread position: | 523-850 | 
| Cow position: | chr3:17222502-17222168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 53, 7 | 
| Conread position: | 525-734 | 
| Cow position: | chr3:59179059-59179271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 53, 22 | 
| Conread position: | 525-778 | 
| Cow position: | chr3:78076840-78077099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 525-822 | 
| Cow position: | chr3:75570782-75570497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 24, 53 | 
| Conread position: | 525-826 | 
| Cow position: | chr3:71497496-71497183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 247 | 
| Conread position: | 525-835 | 
| Cow position: | chr3:43085256-43085571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 47, 82 | 
| Conread position: | 526-622 | 
| Cow position: | chr3:61922391-61922490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 526-762 | 
| Cow position: | chr3:4040286-4040525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 51, 81 | 
| Conread position: | 526-828 | 
| Cow position: | chr3:69945289-69944978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 11, 285 | 
| Conread position: | 526-834 | 
| Cow position: | chr3:22481456-22481141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 47, 127 | 
| Conread position: | 526-850 | 
| Cow position: | chr3:83816150-83815813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 52, 214 | 
| Conread position: | 526-853 | 
| Cow position: | chr3:80973005-80973328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 52, 12 | 
| Conread position: | 527-724 | 
| Cow position: | chr3:56160957-56161160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 93, 42 | 
| Conread position: | 527-728 | 
| Cow position: | chr3:76091940-76092144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 56, 93 | 
| Conread position: | 527-733 | 
| Cow position: | chr3:83988136-83988341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 165, 152 | 
| Conread position: | 527-757 | 
| Cow position: | chr3:72801700-72801462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 47, 127 | 
| Conread position: | 527-789 | 
| Cow position: | chr3:11640089-11640350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 46 | 
| Conread position: | 527-821 | 
| Cow position: | chr3:70895699-70895998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 19 | 
| Conread position: | 529-742 | 
| Cow position: | chr3:11186872-11186652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 45, 111 | 
| Conread position: | 529-790 | 
| Cow position: | chr3:22632592-22632860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 43, 125 | 
| Conread position: | 530-742 | 
| Cow position: | chr3:20862885-20863104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 44, 124 | 
| Conread position: | 530-760 | 
| Cow position: | chr3:29311194-29310959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 49, 125 | 
| Conread position: | 530-818 | 
| Cow position: | chr3:58206794-58206503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 48, 16 | 
| Conread position: | 532-655 | 
| Cow position: | chr3:15377767-15377641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 532-791 | 
| Cow position: | chr3:33214748-33215015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 48, 122 | 
| Conread position: | 533-757 | 
| Cow position: | chr3:11561-11793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 41, 121 | 
| Conread position: | 533-789 | 
| Cow position: | chr3:58283352-58283089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 50, 154 | 
| Conread position: | 533-796 | 
| Cow position: | chr3:61467275-61467530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 145, 44 | 
| Conread position: | 533-810 | 
| Cow position: | chr3:16547334-16547616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 206 | 
| Conread position: | 533-823 | 
| Cow position: | chr3:22954191-22953904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 45, 62 | 
| Conread position: | 533-825 | 
| Cow position: | chr3:209980-210273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 155 | 
| Conread position: | 533-847 | 
| Cow position: | chr3:83474407-83474715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 45, 82 | 
| Conread position: | 533-850 | 
| Cow position: | chr3:2393314-2392988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 44, 294 | 
| Conread position: | 533-891 | 
| Cow position: | chr3:80071775-80072143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 45, 89 | 
| Conread position: | 534-742 | 
| Cow position: | chr3:36126312-36126527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 40, 120 | 
| Conread position: | 534-782 | 
| Cow position: | chr3:48852302-48852051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 148, 35 | 
| Conread position: | 535-736 | 
| Cow position: | chr3:52722345-52722136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 43, 116 | 
| Conread position: | 535-742 | 
| Cow position: | chr3:16233919-16233705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 119 | 
| Conread position: | 535-760 | 
| Cow position: | chr3:49541102-49540873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 49, 91 | 
| Conread position: | 535-797 | 
| Cow position: | chr3:61857156-61857431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 535-891 | 
| Cow position: | chr3:4222979-4223332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 92, 39 | 
| Conread position: | 536-684 | 
| Cow position: | chr3:61323015-61323163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 42, 143 | 
| Conread position: | 536-825 | 
| Cow position: | chr3:81471436-81471142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 83 | 
| Conread position: | 536-850 | 
| Cow position: | chr3:59451256-59451568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 42, 89 | 
| Conread position: | 537-719 | 
| Cow position: | chr3:76614305-76614484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 37, 144 | 
| Conread position: | 537-753 | 
| Cow position: | chr3:27553213-27553438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 41, 85 | 
| Conread position: | 539-742 | 
| Cow position: | chr3:48900838-48900632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 39, 115 | 
| Conread position: | 539-773 | 
| Cow position: | chr3:27609796-27610040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 35, 115 | 
| Conread position: | 539-832 | 
| Cow position: | chr3:57479665-57479368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 44, 114 | 
| Conread position: | 547-760 | 
| Cow position: | chr3:31517087-31516880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 31, 80 | 
| Conread position: | 547-769 | 
| Cow position: | chr3:27546158-27545941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 143, 73 | 
| Conread position: | 547-791 | 
| Cow position: | chr3:34571070-34571321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 35, 138 | 
| Conread position: | 547-820 | 
| Cow position: | chr3:81939926-81940206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 25, 35 | 
| Conread position: | 547-820 | 
| Cow position: | chr3:82657413-82657134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 26, 166 | 
| Conread position: | 547-825 | 
| Cow position: | chr3:55970179-55970461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 31, 73 | 
| Conread position: | 547-833 | 
| Cow position: | chr3:2397111-2396817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 31, 274 | 
| Conread position: | 548-808 | 
| Cow position: | chr3:17935254-17935001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 26, 141 | 
| Conread position: | 548-810 | 
| Cow position: | chr3:83920874-83921138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 222 | 
| Conread position: | 548-848 | 
| Cow position: | chr3:74600792-74601086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 12, 129 | 
| Conread position: | 548-856 | 
| Cow position: | chr3:49678795-49679112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 27, 106 | 
| Conread position: | 549-727 | 
| Cow position: | chr3:13350591-13350771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 66, 41 | 
| Conread position: | 551-700 | 
| Cow position: | chr3:50099168-50099322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 551-835 | 
| Cow position: | chr3:70675897-70676186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 54, 23 | 
| Conread position: | 551-849 | 
| Cow position: | chr3:59271235-59271516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 23, 70 | 
| Conread position: | 552-768 | 
| Cow position: | chr3:81034100-81033875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 552-814 | 
| Cow position: | chr3:23944777-23945043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 29, 7 | 
| Conread position: | 552-856 | 
| Cow position: | chr3:59267763-59268069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 30, 14 | 
| Conread position: | 553-814 | 
| Cow position: | chr3:28898550-28898276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 25, 75 | 
| Conread position: | 555-824 | 
| Cow position: | chr3:67704216-67704499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 23, 188 | 
| Conread position: | 555-835 | 
| Cow position: | chr3:78530222-78530501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 78, 22 | 
| Conread position: | 555-857 | 
| Cow position: | chr3:20256873-20257196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 555-857 | 
| Cow position: | chr3:57754800-57754495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 20, 53 | 
| Conread position: | 556-856 | 
| Cow position: | chr3:78200948-78201248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 22, 185 | 
| Conread position: | 558-847 | 
| Cow position: | chr3:53112851-53113146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 184 | 
| Conread position: | 561-813 | 
| Cow position: | chr3:29812931-29813188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 8, 60 | 
| Conread position: | 563-839 | 
| Cow position: | chr3:53790856-53790566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 15, 59 | 
| Conread position: | 565-735 | 
| Cow position: | chr3:83698245-83698076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 14, 56 | 
| Conread position: | 565-753 | 
| Cow position: | chr3:49388536-49388721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 51, 15 | 
| Conread position: | 565-781 | 
| Cow position: | chr3:34316270-34316049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 114, 17 | 
| Conread position: | 565-813 | 
| Cow position: | chr3:64281243-64280988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 114, 169 | 
| Conread position: | 565-850 | 
| Cow position: | chr3:65800285-65800566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 14, 51 | 
| Conread position: | 566-769 | 
| Cow position: | chr3:59392411-59392207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 113, 9 | 
| Conread position: | 568-802 | 
| Cow position: | chr3:56704838-56704611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 176, 7 | 
| Conread position: | 569-732 | 
| Cow position: | chr3:66885340-66885174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 121, 11 | 
| Conread position: | 569-736 | 
| Cow position: | chr3:66964595-66964433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 569-766 | 
| Cow position: | chr3:33693347-33693544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 109, 11 | 
| Conread position: | 569-773 | 
| Cow position: | chr3:73956722-73956929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 167 | 
| Conread position: | 569-778 | 
| Cow position: | chr3:3738188-3738393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 130, 49 | 
| Conread position: | 569-789 | 
| Cow position: | chr3:51609514-51609737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 109, 11 | 
| Conread position: | 569-807 | 
| Cow position: | chr3:21081689-21081438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 64 | 
| Conread position: | 569-819 | 
| Cow position: | chr3:14602015-14601762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 103, 11 | 
| Conread position: | 569-822 | 
| Cow position: | chr3:64172141-64172391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 12, 93 | 
| Conread position: | 569-825 | 
| Cow position: | chr3:53739495-53739231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 22, 8 | 
| Conread position: | 569-830 | 
| Cow position: | chr3:73467317-73467582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 119, 11 | 
| Conread position: | 569-831 | 
| Cow position: | chr3:62292418-62292161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 211, 10 | 
| Conread position: | 569-832 | 
| Cow position: | chr3:19006365-19006618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 569-850 | 
| Cow position: | chr3:66292480-66292202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 17, 8 | 
| Conread position: | 569-853 | 
| Cow position: | chr3:30417822-30418113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 12, 139 | 
| Conread position: | 571-820 | 
| Cow position: | chr3:30463467-30463221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 220, 170 | 
| Conread position: | 571-825 | 
| Cow position: | chr3:35975406-35975154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 173, 118 | 
| Conread position: | 571-856 | 
| Cow position: | chr3:24305206-24304935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 161, 74 | 
| Conread position: | 572-732 | 
| Cow position: | chr3:11277014-11276857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 66, 47 | 
| Conread position: | 572-807 | 
| Cow position: | chr3:2518837-2518594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 572-820 | 
| Cow position: | chr3:70401603-70401851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 219, 47 | 
| Conread position: | 572-822 | 
| Cow position: | chr3:18763594-18763847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 174, 110 | 
| Conread position: | 572-853 | 
| Cow position: | chr3:46161145-46160866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 183, 162 | 
| Conread position: | 572-853 | 
| Cow position: | chr3:72473607-72473892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 144, 132 | 
| Conread position: | 572-856 | 
| Cow position: | chr3:53909814-53910089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 61, 32 | 
| Conread position: | 572-857 | 
| Cow position: | chr3:2216060-2216349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 107, 47 | 
| Conread position: | 574-800 | 
| Cow position: | chr3:19198383-19198601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 167, 0 | 
| Conread position: | 575-709 | 
| Cow position: | chr3:15549194-15549326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 6, 47 | 
| Conread position: | 575-749 | 
| Cow position: | chr3:55815048-55815218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 575-841 | 
| Cow position: | chr3:74699693-74699425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 6, 76 | 
| Conread position: | 576-824 | 
| Cow position: | chr3:73443383-73443135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 168, 158 | 
| Conread position: | 578-791 | 
| Cow position: | chr3:72121-72332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 166, 100 | 
| Conread position: | 578-825 | 
| Cow position: | chr3:70333767-70333526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 154, 42 | 
| Conread position: | 578-827 | 
| Cow position: | chr3:12286941-12287189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 108, 80 | 
| Conread position: | 578-841 | 
| Cow position: | chr3:11019824-11020097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 125, 86 | 
| Conread position: | 578-848 | 
| Cow position: | chr3:74409200-74409457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 13, 46 | 
| Conread position: | 578-855 | 
| Cow position: | chr3:11728376-11728098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 138, 126 | 
| Conread position: | 579-825 | 
| Cow position: | chr3:8393053-8393304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 115, 243 | 
| Conread position: | 580-736 | 
| Cow position: | chr3:11949645-11949489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 580-774 | 
| Cow position: | chr3:42594948-42594751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 63, 39 | 
| Conread position: | 580-778 | 
| Cow position: | chr3:68881401-68881206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 111, 39 | 
| Conread position: | 580-789 | 
| Cow position: | chr3:18854801-18855012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 156, 98 | 
| Conread position: | 580-789 | 
| Cow position: | chr3:31309646-31309437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 164, 17 | 
| Conread position: | 580-789 | 
| Cow position: | chr3:33253170-33252960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 40, 25 | 
| Conread position: | 580-814 | 
| Cow position: | chr3:54862716-54862470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 580-825 | 
| Cow position: | chr3:3985038-3985281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 164, 119 | 
| Conread position: | 580-825 | 
| Cow position: | chr3:4031678-4031928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 109, 12 | 
| Conread position: | 580-825 | 
| Cow position: | chr3:45647845-45648089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 25, 114 | 
| Conread position: | 580-825 | 
| Cow position: | chr3:73759811-73759562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 34, 68 | 
| Conread position: | 580-850 | 
| Cow position: | chr3:71430503-71430230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 110, 14 | 
| Conread position: | 580-851 | 
| Cow position: | chr3:45534591-45534318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 124, 38 | 
| Conread position: | 581-737 | 
| Cow position: | chr3:70468094-70467943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 581-813 | 
| Cow position: | chr3:25691458-25691698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 98, 133 | 
| Conread position: | 581-848 | 
| Cow position: | chr3:56059516-56059783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 183, 97 | 
| Conread position: | 582-728 | 
| Cow position: | chr3:54740161-54740015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 124, 37 | 
| Conread position: | 582-735 | 
| Cow position: | chr3:32869859-32870011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 149, 107 | 
| Conread position: | 582-736 | 
| Cow position: | chr3:44861598-44861440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 582-755 | 
| Cow position: | chr3:58135324-58135155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 167, 107 | 
| Conread position: | 582-778 | 
| Cow position: | chr3:68708291-68708098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 122, 37 | 
| Conread position: | 582-781 | 
| Cow position: | chr3:15158751-15158951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 162, 152 | 
| Conread position: | 582-789 | 
| Cow position: | chr3:63179578-63179779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 158, 101 | 
| Conread position: | 582-789 | 
| Cow position: | chr3:79148566-79148352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 582-822 | 
| Cow position: | chr3:17957177-17957416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 154, 50 | 
| Conread position: | 582-823 | 
| Cow position: | chr3:56659-56423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 92, 36 | 
| Conread position: | 582-824 | 
| Cow position: | chr3:17895564-17895798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 162, 86 | 
| Conread position: | 582-825 | 
| Cow position: | chr3:13330062-13329819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 163, 38 | 
| Conread position: | 582-835 | 
| Cow position: | chr3:43571453-43571706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 162, 12 | 
| Conread position: | 582-835 | 
| Cow position: | chr3:45647387-45647644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 32, 19 | 
| Conread position: | 582-850 | 
| Cow position: | chr3:5096913-5097181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 111 | 
| Conread position: | 582-850 | 
| Cow position: | chr3:23471758-23471485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 108, 205 | 
| Conread position: | 582-850 | 
| Cow position: | chr3:78946129-78945857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 55, 71 | 
| Conread position: | 582-851 | 
| Cow position: | chr3:54050309-54050050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 113, 89 | 
| Conread position: | 582-856 | 
| Cow position: | chr3:78894604-78894345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 153, 94 | 
| Conread position: | 583-814 | 
| Cow position: | chr3:66116401-66116166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 173, 0 | 
| Conread position: | 583-857 | 
| Cow position: | chr3:29596106-29596371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 32, 14 | 
| Conread position: | 584-736 | 
| Cow position: | chr3:45333888-45333734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 106, 35 | 
| Conread position: | 584-757 | 
| Cow position: | chr3:80202319-80202494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 584-835 | 
| Cow position: | chr3:27532950-27532689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 584-835 | 
| Cow position: | chr3:74533060-74533313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 94, 154 | 
| Conread position: | 584-850 | 
| Cow position: | chr3:23876710-23876971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 160, 99 | 
| Conread position: | 584-850 | 
| Cow position: | chr3:27274252-27274505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 160, 48 | 
| Conread position: | 584-858 | 
| Cow position: | chr3:39970160-39969879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 94, 239 | 
| Conread position: | 585-735 | 
| Cow position: | chr3:36100541-36100695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 586-782 | 
| Cow position: | chr3:83369036-83369227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 159, 97 | 
| Conread position: | 586-850 | 
| Cow position: | chr3:71161508-71161774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 158, 225 | 
| Conread position: | 587-808 | 
| Cow position: | chr3:78443849-78443621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 587-835 | 
| Cow position: | chr3:19789404-19789150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 127, 184 | 
| Conread position: | 588-737 | 
| Cow position: | chr3:3096631-3096485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 588-818 | 
| Cow position: | chr3:67744912-67744679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 65, 151 | 
| Conread position: | 588-824 | 
| Cow position: | chr3:52863467-52863229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 31 | 
| Conread position: | 588-829 | 
| Cow position: | chr3:77224836-77225074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 150, 113 | 
| Conread position: | 589-737 | 
| Cow position: | chr3:39873944-39873799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 113, 30 | 
| Conread position: | 589-814 | 
| Cow position: | chr3:16333516-16333744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 25, 107 | 
| Conread position: | 589-820 | 
| Cow position: | chr3:20675162-20674922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 120, 61 | 
| Conread position: | 590-718 | 
| Cow position: | chr3:59040161-59040292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 89, 29 | 
| Conread position: | 590-781 | 
| Cow position: | chr3:59208532-59208723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 154, 144 | 
| Conread position: | 590-824 | 
| Cow position: | chr3:39171766-39171526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 100, 142 | 
| Conread position: | 590-832 | 
| Cow position: | chr3:81401582-81401345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 114, 17 | 
| Conread position: | 590-836 | 
| Cow position: | chr3:8457375-8457622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 89, 13 | 
| Conread position: | 590-857 | 
| Cow position: | chr3:14801469-14801725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 81, 106 | 
| Conread position: | 590-857 | 
| Cow position: | chr3:18497743-18497997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 142, 29 | 
| Conread position: | 590-857 | 
| Cow position: | chr3:66901024-66900752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 146, 195 | 
| Conread position: | 591-736 | 
| Cow position: | chr3:22170908-22171050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 37, 100 | 
| Conread position: | 591-736 | 
| Cow position: | chr3:32597209-32597064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 591-768 | 
| Cow position: | chr3:20155549-20155726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 154, 28 | 
| Conread position: | 591-825 | 
| Cow position: | chr3:68583283-68583050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 153, 28 | 
| Conread position: | 591-829 | 
| Cow position: | chr3:77365575-77365336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 63, 78 | 
| Conread position: | 591-835 | 
| Cow position: | chr3:81277985-81277735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 23, 148 | 
| Conread position: | 591-856 | 
| Cow position: | chr3:17456550-17456288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 87, 189 | 
| Conread position: | 592-735 | 
| Cow position: | chr3:17284556-17284704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 592-736 | 
| Cow position: | chr3:23477955-23478100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 592-784 | 
| Cow position: | chr3:18607088-18607285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 28, 165 | 
| Conread position: | 592-788 | 
| Cow position: | chr3:34392376-34392181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 95, 27 | 
| Conread position: | 592-810 | 
| Cow position: | chr3:49482984-49482766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 140, 27 | 
| Conread position: | 592-814 | 
| Cow position: | chr3:57763943-57764171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 87, 146 | 
| Conread position: | 592-814 | 
| Cow position: | chr3:75158085-75158304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 152, 93 | 
| Conread position: | 592-831 | 
| Cow position: | chr3:26065721-26065964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 110, 144 | 
| Conread position: | 592-832 | 
| Cow position: | chr3:5416511-5416264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 110, 202 | 
| Conread position: | 592-848 | 
| Cow position: | chr3:38863833-38864097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 44, 109 | 
| Conread position: | 592-850 | 
| Cow position: | chr3:55124558-55124306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 159, 0 | 
| Conread position: | 592-856 | 
| Cow position: | chr3:63861181-63860909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 85, 200 | 
| Conread position: | 593-810 | 
| Cow position: | chr3:13577459-13577248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 196, 12 | 
| Conread position: | 593-814 | 
| Cow position: | chr3:42588070-42588302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 593-815 | 
| Cow position: | chr3:49731916-49731695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 152, 26 | 
| Conread position: | 593-856 | 
| Cow position: | chr3:42483621-42483888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 151, 226 | 
| Conread position: | 594-789 | 
| Cow position: | chr3:32584880-32585069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 150, 85 | 
| Conread position: | 594-810 | 
| Cow position: | chr3:42367767-42367561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 151, 46 | 
| Conread position: | 594-814 | 
| Cow position: | chr3:5374057-5374277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 596-822 | 
| Cow position: | chr3:5899550-5899776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 148, 26 | 
| Conread position: | 597-776 | 
| Cow position: | chr3:7331394-7331209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 598-764 | 
| Cow position: | chr3:84368643-84368480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 142, 21 | 
| Conread position: | 598-819 | 
| Cow position: | chr3:70334977-70334745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 25, 54 | 
| Conread position: | 598-848 | 
| Cow position: | chr3:54945851-54946103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 81, 29 | 
| Conread position: | 598-853 | 
| Cow position: | chr3:51542811-51543065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 68, 84 | 
| Conread position: | 599-778 | 
| Cow position: | chr3:525081-525256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 148, 87 | 
| Conread position: | 600-835 | 
| Cow position: | chr3:70899628-70899856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 144, 109 | 
| Conread position: | 601-814 | 
| Cow position: | chr3:84000341-84000558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 143, 0 | 
| Conread position: | 602-813 | 
| Cow position: | chr3:13302126-13301906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 60, 103 | 
| Conread position: | 602-818 | 
| Cow position: | chr3:51578591-51578372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 95, 132 | 
| Conread position: | 602-826 | 
| Cow position: | chr3:54770734-54770966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 603-732 | 
| Cow position: | chr3:17451203-17451070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 603-850 | 
| Cow position: | chr3:14633255-14633009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 71, 16 | 
| Conread position: | 604-807 | 
| Cow position: | chr3:52650797-52650593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 90, 16 | 
| Conread position: | 606-832 | 
| Cow position: | chr3:56476416-56476638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 138, 91 | 
| Conread position: | 607-789 | 
| Cow position: | chr3:59701748-59701926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 126, 78 | 
| Conread position: | 607-810 | 
| Cow position: | chr3:73394851-73395062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 607-824 | 
| Cow position: | chr3:55970960-55971182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 95, 128 | 
| Conread position: | 608-832 | 
| Cow position: | chr3:73590262-73590038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 139, 25 | 
| Conread position: | 608-850 | 
| Cow position: | chr3:73460715-73460941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 220, 20 | 
| Conread position: | 610-730 | 
| Cow position: | chr3:9638855-9638736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 610-807 | 
| Cow position: | chr3:75080504-75080705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 73, 177 | 
| Conread position: | 610-822 | 
| Cow position: | chr3:28692691-28692479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 122, 9 | 
| Conread position: | 610-857 | 
| Cow position: | chr3:74621259-74621008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 68, 118 | 
| Conread position: | 610-864 | 
| Cow position: | chr3:83455414-83455164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 67, 133 | 
| Conread position: | 611-807 | 
| Cow position: | chr3:51234357-51234157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 132, 82 | 
| Conread position: | 613-780 | 
| Cow position: | chr3:52607924-52608095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 77, 125 | 
| Conread position: | 613-825 | 
| Cow position: | chr3:45307675-45307890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 73, 119 | 
| Conread position: | 614-807 | 
| Cow position: | chr3:8604272-8604076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 614-821 | 
| Cow position: | chr3:61143835-61144052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 88, 127 | 
| Conread position: | 614-822 | 
| Cow position: | chr3:71237899-71238109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 130, 36 | 
| Conread position: | 614-826 | 
| Cow position: | chr3:4087424-4087206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 118, 75 | 
| Conread position: | 614-850 | 
| Cow position: | chr3:8060874-8061103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 126, 64 | 
| Conread position: | 614-853 | 
| Cow position: | chr3:23448389-23448160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 134, 67 | 
| Conread position: | 615-828 | 
| Cow position: | chr3:22820312-22820526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 130, 64 | 
| Conread position: | 616-802 | 
| Cow position: | chr3:23269846-23270031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 128, 65 | 
| Conread position: | 616-820 | 
| Cow position: | chr3:2680255-2680468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 616-825 | 
| Cow position: | chr3:43233247-43233460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 78, 194 | 
| Conread position: | 618-808 | 
| Cow position: | chr3:5045064-5044864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 619-806 | 
| Cow position: | chr3:41328202-41328383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 125, 57 | 
| Conread position: | 619-823 | 
| Cow position: | chr3:26970572-26970780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 62, 117 | 
| Conread position: | 619-838 | 
| Cow position: | chr3:15192310-15192532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 26, 200 | 
| Conread position: | 619-850 | 
| Cow position: | chr3:48578588-48578815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 86, 43 | 
| Conread position: | 621-825 | 
| Cow position: | chr3:52652325-52652127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 170, 72 | 
| Conread position: | 622-832 | 
| Cow position: | chr3:15752878-15752675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 169, 56 | 
| Conread position: | 624-839 | 
| Cow position: | chr3:44932260-44932479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 67, 192 | 
| Conread position: | 624-857 | 
| Cow position: | chr3:55947327-55947565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 54, 190 | 
| Conread position: | 626-850 | 
| Cow position: | chr3:23445136-23444914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 116, 63 | 
| Conread position: | 628-825 | 
| Cow position: | chr3:77006261-77006445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 116, 51 | 
| Conread position: | 635-750 | 
| Cow position: | chr3:27940365-27940250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 112, 99 | 
| Conread position: | 635-799 | 
| Cow position: | chr3:29334751-29334581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 635-810 | 
| Cow position: | chr3:4861452-4861624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 109, 99 | 
| Conread position: | 635-814 | 
| Cow position: | chr3:83201765-83201581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 69, 103 | 
| Conread position: | 637-802 | 
| Cow position: | chr3:35074446-35074614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 67, 30 | 
| Conread position: | 637-825 | 
| Cow position: | chr3:17447843-17447654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 107, 80 | 
| Conread position: | 637-857 | 
| Cow position: | chr3:39661685-39661475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 99, 52 | 
| Conread position: | 650-791 | 
| Cow position: | chr3:22734497-22734356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 655-857 | 
| Cow position: | chr3:25944860-25945074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 42, 158 | 
| Conread position: | 657-848 | 
| Cow position: | chr3:70609407-70609603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 48, 92 | 
| Conread position: | 657-850 | 
| Cow position: | chr3:76713537-76713346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 83, 47 | 
| Conread position: | 679-829 | 
| Cow position: | chr3:55712236-55712389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 58, 133 | 
| Conread position: | 679-850 | 
| Cow position: | chr3:70631825-70631992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 55, 0 | 
Show alignments to all cow chromosomes.
