Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               5-260
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               6-161
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               6-433
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 169
               

               Conread position:
               6-440
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               285
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               6-453
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 233
               

               Conread position:
               6-708
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               8-388
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 235
               

               Conread position:
               8-407
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 125
               

               Conread position:
               9-381
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 219
               

               Conread position:
               13-661
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 73
               

               Conread position:
               13-708
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 182
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-244
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               51-429
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               54-381
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               12, 116
               

               Conread position:
               57-224
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 47
               

               Conread position:
               57-327
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               57-400
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               57-401
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               57-519
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               57-648
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               59-382
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               112, 101
               

               Conread position:
               63-307
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               63-386
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               281, 166
               

               Conread position:
               64-433
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               70-704
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 19
               

               Conread position:
               71-462
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               88, 109
               

               Conread position:
               73-372
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               270, 109
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-402
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               270, 130
               

               Conread position:
               73-414
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               187, 157
               

               Conread position:
               73-416
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               73-422
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 106
               

               Conread position:
               74-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               158, 189
               

               Conread position:
               75-401
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               77-386
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               183, 153
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               102, 154
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               266, 153
               

               Conread position:
               77-408
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               266, 116
               

               Conread position:
               77-425
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               259, 58
               

               Conread position:
               91-484
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               153-408
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               170-624
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               294-701
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               110, 14
               
Show alignments to all cow chromosomes.