Cow genome map
Conread name: | Ss1.1-rcbl0_018774.5 |
Conread position: | 7-225 |
Cow position: | chr11:15983105-15982881 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 154 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 8-347 |
Cow position: | chr11:44895543-44895869 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 228 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 59, 144 |
Conread position: | 8-379 |
Cow position: | chr11:8887676-8888054 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 244 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 115, 49 |
Conread position: | 8-432 |
Cow position: | chr11:59433712-59434129 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 271 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 162, 66 |
Conread position: | 15-376 |
Cow position: | chr11:7394582-7394216 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 256 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 69, 127 |
Conread position: | 22-207 |
Cow position: | chr11:67847128-67847314 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 131 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 27, 11 |
Conread position: | 22-225 |
Cow position: | chr11:67449929-67449730 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 27-660 |
Cow position: | chr11:81853154-81853777 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 6 |
Conread position: | 28-526 |
Cow position: | chr11:44507603-44507131 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 5 |
Conread position: | 29-381 |
Cow position: | chr11:9157977-9158327 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 239 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 170 |
Conread position: | 32-408 |
Cow position: | chr11:77729096-77729466 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 245 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 41, 185 |
Conread position: | 33-387 |
Cow position: | chr11:10846873-10846532 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 234 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 33, 171 |
Conread position: | 33-388 |
Cow position: | chr11:54209056-54208696 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 239 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 16, 25 |
Conread position: | 34-423 |
Cow position: | chr11:72005468-72005092 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 267 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 31, 83 |
Conread position: | 36-387 |
Cow position: | chr11:85394383-85394730 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 224 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 13, 196 |
Conread position: | 36-443 |
Cow position: | chr11:17925141-17925532 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 272 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 18, 7 |
Conread position: | 37-421 |
Cow position: | chr11:7112883-7112492 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 260 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 7, 39 |
Conread position: | 38-490 |
Cow position: | chr11:21441048-21440606 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 299 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 11, 98 |
Conread position: | 48-490 |
Cow position: | chr11:87127257-87126839 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 303 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 14, 157 |
Conread position: | 53-490 |
Cow position: | chr11:72017634-72017199 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 17 |
Conread position: | 54-399 |
Cow position: | chr11:9220608-9220949 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 240 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 175, 139 |
Conread position: | 54-557 |
Cow position: | chr11:87171853-87171376 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 321 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 12, 121 |
Conread position: | 54-658 |
Cow position: | chr11:65162128-65162724 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 129 |
Conread position: | 57-216 |
Cow position: | chr11:29234238-29234393 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 57-225 |
Cow position: | chr11:9736542-9736710 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 57-226 |
Cow position: | chr11:11126326-11126160 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 51, 13 |
Conread position: | 57-372 |
Cow position: | chr11:48084728-48084436 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 214 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 197, 69 |
Conread position: | 57-408 |
Cow position: | chr11:44496178-44496526 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 233 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 133, 170 |
Conread position: | 57-434 |
Cow position: | chr11:24242849-24242488 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 35 |
Conread position: | 57-488 |
Cow position: | chr11:42428739-42428323 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 118 |
Conread position: | 57-658 |
Cow position: | chr11:49076259-49076834 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 46 |
Conread position: | 58-344 |
Cow position: | chr11:24677458-24677187 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 193 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 178, 15 |
Conread position: | 59-518 |
Cow position: | chr11:7687315-7686849 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 128 |
Conread position: | 61-489 |
Cow position: | chr11:25180479-25180079 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 100 |
Conread position: | 64-480 |
Cow position: | chr11:2337401-2337003 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 260 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 97, 166 |
Conread position: | 64-491 |
Cow position: | chr11:28662232-28661814 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 290 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 44, 144 |
Conread position: | 65-645 |
Cow position: | chr11:3237940-3237378 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 478, 108 |
Conread position: | 73-371 |
Cow position: | chr11:53432382-53432674 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 195 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-372 |
Cow position: | chr11:11987506-11987213 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 201 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-387 |
Cow position: | chr11:12359035-12359340 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 209 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 270, 37 |
Conread position: | 73-387 |
Cow position: | chr11:23876691-23876383 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 206 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-387 |
Cow position: | chr11:29669242-29669546 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 206 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 270, 120 |
Conread position: | 73-387 |
Cow position: | chr11:38836030-38836338 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 187, 157 |
Conread position: | 73-399 |
Cow position: | chr11:37093675-37093995 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 217 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-400 |
Cow position: | chr11:12093148-12092822 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 233 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 153, 112 |
Conread position: | 73-408 |
Cow position: | chr11:8262307-8262641 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 224 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 163, 93 |
Conread position: | 73-408 |
Cow position: | chr11:26125541-26125876 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 231 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 187, 157 |
Conread position: | 73-408 |
Cow position: | chr11:58133745-58133411 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 219 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-420 |
Cow position: | chr11:4028163-4028499 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 227 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 98, 158 |
Conread position: | 73-425 |
Cow position: | chr11:19103099-19103447 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 236 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 75-408 |
Cow position: | chr11:52462481-52462128 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 236 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 77-375 |
Cow position: | chr11:76375085-76375377 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 203 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 124, 45 |
Conread position: | 77-387 |
Cow position: | chr11:28055211-28055504 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 201 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 77-387 |
Cow position: | chr11:72110576-72110880 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 203 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 266, 147 |
Conread position: | 90-437 |
Cow position: | chr11:64355580-64355243 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 232 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 182, 49 |
Conread position: | 92-387 |
Cow position: | chr11:8244072-8243784 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 201 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 251, 138 |
Conread position: | 108-389 |
Cow position: | chr11:75919921-75919634 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 163 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 128, 210 |
Conread position: | 127-400 |
Cow position: | chr11:56179249-56178987 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 35, 10 |
Conread position: | 135-498 |
Cow position: | chr11:25182162-25181804 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 250 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 190, 13 |
Conread position: | 155-566 |
Cow position: | chr11:32682988-32682580 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 274 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 68, 41 |
Conread position: | 218-515 |
Cow position: | chr11:7306275-7306583 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 208 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 12, 65 |
Conread position: | 324-619 |
Cow position: | chr11:7110732-7111029 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 201 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 24, 94 |
Conread position: | 338-703 |
Cow position: | chr11:11124595-11124217 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 266 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 75, 92 |
Show alignments to all cow chromosomes.