Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-347
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               8-379
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 49
               

               Conread position:
               8-432
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               162, 66
               

               Conread position:
               15-376
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               69, 127
               

               Conread position:
               22-207
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               27-660
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               28-526
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 5
               

               Conread position:
               29-381
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 170
               

               Conread position:
               32-408
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 185
               

               Conread position:
               33-387
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 171
               

               Conread position:
               33-388
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               34-423
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               36-387
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 196
               

               Conread position:
               36-443
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               37-421
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               38-490
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               299
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 98
               

               Conread position:
               48-490
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               53-490
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               54-399
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               175, 139
               

               Conread position:
               54-557
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               321
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 121
               

               Conread position:
               54-658
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 129
               

               Conread position:
               57-216
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               57-225
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-226
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               197, 69
               

               Conread position:
               57-408
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               133, 170
               

               Conread position:
               57-434
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 35
               

               Conread position:
               57-488
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 118
               

               Conread position:
               57-658
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               58-344
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               178, 15
               

               Conread position:
               59-518
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 128
               

               Conread position:
               61-489
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 100
               

               Conread position:
               64-480
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               97, 166
               

               Conread position:
               64-491
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 144
               

               Conread position:
               65-645
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               478, 108
               

               Conread position:
               73-371
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-372
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               270, 37
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               270, 120
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               187, 157
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               153, 112
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               163, 93
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               187, 157
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-420
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               98, 158
               

               Conread position:
               73-425
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               75-408
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               77-375
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 45
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               266, 147
               

               Conread position:
               90-437
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               182, 49
               

               Conread position:
               92-387
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               251, 138
               

               Conread position:
               108-389
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 210
               

               Conread position:
               127-400
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               135-498
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               190, 13
               

               Conread position:
               155-566
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               218-515
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               324-619
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               338-703
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               75, 92
               
Show alignments to all cow chromosomes.