Cow genome map
| Conread name: | Ss1.1-rcbl0_018774.5 |
| Conread position: | 8-623 |
| Cow position: | chr12:16326493-16325904 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 169 |
| Conread position: | 9-600 |
| Cow position: | chr12:347585-347032 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 393 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 16-224 |
| Cow position: | chr12:21207429-21207220 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 20-372 |
| Cow position: | chr12:21197560-21197207 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 22-225 |
| Cow position: | chr12:37558285-37558081 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 28-386 |
| Cow position: | chr12:27933226-27933575 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 5 |
| Conread position: | 28-599 |
| Cow position: | chr12:2839870-2840424 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 6 |
| Conread position: | 32-222 |
| Cow position: | chr12:15951539-15951731 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 159, 38 |
| Conread position: | 33-399 |
| Cow position: | chr12:42860099-42860462 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 38-400 |
| Cow position: | chr12:34855451-34855817 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 194 |
| Conread position: | 57-623 |
| Cow position: | chr12:21499816-21499255 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 58-623 |
| Cow position: | chr12:1868154-1867606 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 43 |
| Conread position: | 73-387 |
| Cow position: | chr12:252384-252691 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 270, 38 |
| Conread position: | 73-387 |
| Cow position: | chr12:8678445-8678752 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-387 |
| Cow position: | chr12:11097915-11097608 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 263, 157 |
| Conread position: | 73-408 |
| Cow position: | chr12:20998447-20998782 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 190 |
| Conread position: | 73-415 |
| Cow position: | chr12:22206071-22206401 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 270, 120 |
| Conread position: | 73-425 |
| Cow position: | chr12:1402167-1401821 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 74-307 |
| Cow position: | chr12:19171211-19170988 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 112-341 |
| Cow position: | chr12:9708824-9709060 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 130-400 |
| Cow position: | chr12:22121343-22121076 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 150-400 |
| Cow position: | chr12:21058371-21058623 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 190 |
| Conread position: | 150-703 |
| Cow position: | chr12:48404370-48403822 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 44 |
| Conread position: | 296-478 |
| Cow position: | chr12:19868184-19868003 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 148 |
Show alignments to all cow chromosomes.