Cow genome map

Conread name: Ss1.1-rcbl0_018774.5

Conread position: 5-385
Cow position:
Alignm length: 385
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 182, 70

Conread position: 6-388
Cow position:
Alignm length: 397
Alignm identity: 257
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 60

Conread position: 6-435
Cow position:
Alignm length: 438
Alignm identity: 276
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 88, 27

Conread position: 6-463
Cow position:
Alignm length: 460
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 219

Conread position: 7-387
Cow position:
Alignm length: 390
Alignm identity: 249
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 105

Conread position: 7-408
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 99

Conread position: 8-408
Cow position:
Alignm length: 413
Alignm identity: 259
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 69

Conread position: 8-431
Cow position:
Alignm length: 438
Alignm identity: 277
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 233

Conread position: 8-661
Cow position:
Alignm length: 670
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 41

Conread position: 9-462
Cow position:
Alignm length: 467
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 17-344
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 16

Conread position: 18-387
Cow position:
Alignm length: 377
Alignm identity: 238
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 15

Conread position: 22-225
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 11

Conread position: 22-225
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 11

Conread position: 22-225
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 10

Conread position: 28-212
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 181, 5

Conread position: 28-387
Cow position:
Alignm length: 365
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 5

Conread position: 28-387
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 6

Conread position: 33-387
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 199

Conread position: 54-519
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 57-305
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 46

Conread position: 57-346
Cow position:
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 208, 62

Conread position: 57-422
Cow position:
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 163

Conread position: 64-656
Cow position:
Alignm length: 616
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 87

Conread position: 71-349
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 182, 35

Conread position: 73-372
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position:
Alignm length: 321
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 37

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 270, 109

Conread position: 73-388
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 205

Conread position: 73-402
Cow position:
Alignm length: 334
Alignm identity: 219
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 37

Conread position: 73-416
Cow position:
Alignm length: 348
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 42

Conread position: 77-387
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 184, 153

Conread position: 77-387
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 266, 153

Conread position: 77-408
Cow position:
Alignm length: 339
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 266, 38

Conread position: 87-399
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 91

Conread position: 107-408
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 244-408
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 260-708
Cow position:
Alignm length: 465
Alignm identity: 299
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 157, 15

Show alignments to all cow chromosomes.