Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               6-225
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               9-408
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               71, 104
               

               Conread position:
               17-416
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               326, 16
               

               Conread position:
               18-443
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               318, 25
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               169, 11
               

               Conread position:
               28-382
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 6
               

               Conread position:
               28-389
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               28-408
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               32-207
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               33-633
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 92
               

               Conread position:
               34-369
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               48-218
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               51-416
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               54-226
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               54-519
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               307
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               56-661
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               549, 77
               

               Conread position:
               57-314
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               57-387
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               57-401
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               158, 270
               

               Conread position:
               57-401
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               57-408
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               264, 77
               

               Conread position:
               57-464
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 106
               

               Conread position:
               57-472
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               57-626
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 148
               

               Conread position:
               57-627
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               376
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 48
               

               Conread position:
               58-381
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               171, 29
               

               Conread position:
               59-599
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 39
               

               Conread position:
               59-624
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 170
               

               Conread position:
               59-676
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 39
               

               Conread position:
               70-540
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               73-386
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               270, 153
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 158
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-388
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               267, 157
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               160, 179
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               156, 95
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               162, 31
               

               Conread position:
               73-411
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               129, 160
               

               Conread position:
               77-388
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               200, 35
               

               Conread position:
               116-399
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               131-582
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               290
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               269, 64
               

               Conread position:
               138-387
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               173, 92
               

               Conread position:
               151-621
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               297
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               195-706
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               240-660
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               175, 24
               
Show alignments to all cow chromosomes.