Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               151, 65
               

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 115
               

               Conread position:
               6-308
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 110
               

               Conread position:
               6-400
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               55, 106
               

               Conread position:
               6-635
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 103
               

               Conread position:
               7-408
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 59
               

               Conread position:
               9-624
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 205
               

               Conread position:
               20-680
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               21-385
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               21-405
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               205, 19
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               27-624
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 40
               

               Conread position:
               28-422
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               28-424
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               29-707
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               36-408
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               36-408
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               36-420
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 196
               

               Conread position:
               38-362
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 113
               

               Conread position:
               38-400
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               45-671
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 107
               

               Conread position:
               49-399
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               51-226
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 139
               

               Conread position:
               51-408
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               181, 16
               

               Conread position:
               51-413
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               109, 175
               

               Conread position:
               51-489
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               53-439
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               54-222
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               54-399
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 134
               

               Conread position:
               54-405
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               54-660
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               57-615
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               57-699
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               58-283
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               139, 58
               

               Conread position:
               58-529
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               59-564
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 38
               

               Conread position:
               61-432
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               286, 132
               

               Conread position:
               61-484
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               64-388
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 98
               

               Conread position:
               64-661
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               65-402
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               282, 31
               

               Conread position:
               70-437
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               258, 22
               

               Conread position:
               72-399
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 119
               

               Conread position:
               72-420
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               73-295
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 126
               

               Conread position:
               73-372
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               270, 72
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               270, 120
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               156, 102
               

               Conread position:
               73-388
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               73-388
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               144, 205
               

               Conread position:
               73-393
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               179, 21
               

               Conread position:
               73-397
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               136, 158
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               156, 120
               

               Conread position:
               73-402
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               197, 174
               

               Conread position:
               73-405
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               153, 200
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               69, 139
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               73-412
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               144, 205
               

               Conread position:
               73-420
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               263, 157
               

               Conread position:
               73-486
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 139
               

               Conread position:
               74-387
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               269, 156
               

               Conread position:
               74-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               75-408
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               67, 157
               

               Conread position:
               77-399
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               263, 147
               

               Conread position:
               77-425
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               77-441
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               167, 116
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 113
               

               Conread position:
               116-442
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               172-413
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               180, 56
               

               Conread position:
               238-673
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 151
               

               Conread position:
               285-507
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               311-661
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 98
               

               Conread position:
               351-585
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               67, 105
               
Show alignments to all cow chromosomes.