Cow genome map
Conread name: | Ss1.1-rcbl0_018774.5 |
Conread position: | 1-408 |
Cow position: | chr15:7894774-7895171 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 267 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 151, 65 |
Conread position: | 1-478 |
Cow position: | chr15:21448490-21448006 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 115 |
Conread position: | 6-308 |
Cow position: | chr15:49676447-49676138 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 222 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 55, 110 |
Conread position: | 6-400 |
Cow position: | chr15:35648795-35649193 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 282 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 55, 106 |
Conread position: | 6-635 |
Cow position: | chr15:1662803-1662173 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 103 |
Conread position: | 7-408 |
Cow position: | chr15:21960931-21960535 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 266 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 117, 59 |
Conread position: | 9-624 |
Cow position: | chr15:45886222-45885610 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 205 |
Conread position: | 20-680 |
Cow position: | chr15:324311-323668 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 83 |
Conread position: | 21-385 |
Cow position: | chr15:5955075-5955444 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 241 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 14, 23 |
Conread position: | 21-405 |
Cow position: | chr15:53338442-53338055 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 253 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 205, 19 |
Conread position: | 22-225 |
Cow position: | chr15:50124553-50124756 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 142 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 11 |
Conread position: | 27-624 |
Cow position: | chr15:1236799-1236215 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 40 |
Conread position: | 28-422 |
Cow position: | chr15:4384651-4384259 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 255 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 45, 5 |
Conread position: | 28-424 |
Cow position: | chr15:31358280-31357890 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 265 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 45, 5 |
Conread position: | 29-707 |
Cow position: | chr15:21816360-21817038 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 87 |
Conread position: | 36-408 |
Cow position: | chr15:35754454-35754813 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 239 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 13, 125 |
Conread position: | 36-408 |
Cow position: | chr15:42490574-42490203 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 241 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 45, 34 |
Conread position: | 36-420 |
Cow position: | chr15:6554483-6554869 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 258 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 37, 196 |
Conread position: | 38-362 |
Cow position: | chr15:685530-685211 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 113 |
Conread position: | 38-400 |
Cow position: | chr15:24793424-24793072 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 241 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 11, 74 |
Conread position: | 45-671 |
Cow position: | chr15:15266426-15267050 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 107 |
Conread position: | 49-399 |
Cow position: | chr15:20080149-20080489 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 235 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 16, 62 |
Conread position: | 51-226 |
Cow position: | chr15:17787791-17787966 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 14, 139 |
Conread position: | 51-408 |
Cow position: | chr15:327760-327411 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 230 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 181, 16 |
Conread position: | 51-413 |
Cow position: | chr15:490798-491173 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 256 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 109, 175 |
Conread position: | 51-489 |
Cow position: | chr15:32605478-32605898 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 57 |
Conread position: | 53-439 |
Cow position: | chr15:52635517-52635129 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 55 |
Conread position: | 54-222 |
Cow position: | chr15:3903115-3902941 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 11, 93 |
Conread position: | 54-399 |
Cow position: | chr15:4649193-4648858 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 231 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 19, 134 |
Conread position: | 54-405 |
Cow position: | chr15:35681306-35681643 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 245 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 12, 120 |
Conread position: | 54-660 |
Cow position: | chr15:40104801-40104204 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 50 |
Conread position: | 57-615 |
Cow position: | chr15:10479347-10479890 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 17 |
Conread position: | 57-699 |
Cow position: | chr15:4630567-4631217 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 47 |
Conread position: | 58-283 |
Cow position: | chr15:17682850-17683069 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 139, 58 |
Conread position: | 58-529 |
Cow position: | chr15:38957681-38958145 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 88 |
Conread position: | 59-564 |
Cow position: | chr15:11299365-11299845 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 38 |
Conread position: | 61-432 |
Cow position: | chr15:7541319-7540955 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 252 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 286, 132 |
Conread position: | 61-484 |
Cow position: | chr15:8407914-8407481 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 286 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 11, 50 |
Conread position: | 64-388 |
Cow position: | chr15:2006879-2006572 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 221 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 138, 98 |
Conread position: | 64-661 |
Cow position: | chr15:12614413-12613832 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 26 |
Conread position: | 65-402 |
Cow position: | chr15:7927969-7927641 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 237 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 282, 31 |
Conread position: | 70-437 |
Cow position: | chr15:17219532-17219871 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 248 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 258, 22 |
Conread position: | 72-399 |
Cow position: | chr15:36641965-36641643 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 225 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 32, 119 |
Conread position: | 72-420 |
Cow position: | chr15:7836573-7836238 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 229 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 31, 38 |
Conread position: | 73-295 |
Cow position: | chr15:51800078-51799858 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 166 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 83, 126 |
Conread position: | 73-372 |
Cow position: | chr15:15347790-15348083 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 195 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-387 |
Cow position: | chr15:12421833-12422141 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 207 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 270, 157 |
Conread position: | 73-387 |
Cow position: | chr15:17039921-17040226 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 203 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 270, 72 |
Conread position: | 73-387 |
Cow position: | chr15:18576051-18575746 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 210 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 270, 120 |
Conread position: | 73-387 |
Cow position: | chr15:35734795-35734489 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 213 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 156, 102 |
Conread position: | 73-388 |
Cow position: | chr15:7933308-7933012 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 209 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 73-388 |
Cow position: | chr15:10887941-10887614 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 211 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 144, 205 |
Conread position: | 73-393 |
Cow position: | chr15:2923845-2923524 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 214 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 179, 21 |
Conread position: | 73-397 |
Cow position: | chr15:51215924-51215605 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 214 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 136, 158 |
Conread position: | 73-400 |
Cow position: | chr15:6386963-6387291 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 225 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 156, 120 |
Conread position: | 73-402 |
Cow position: | chr15:44828145-44827816 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 208 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 197, 174 |
Conread position: | 73-405 |
Cow position: | chr15:6456620-6456294 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 229 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 153, 200 |
Conread position: | 73-408 |
Cow position: | chr15:370334-370680 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 235 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 69, 139 |
Conread position: | 73-408 |
Cow position: | chr15:8098816-8098476 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 227 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 229, 0 |
Conread position: | 73-412 |
Cow position: | chr15:14583268-14583615 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 232 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 144, 205 |
Conread position: | 73-420 |
Cow position: | chr15:21666689-21667029 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 221 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 263, 157 |
Conread position: | 73-486 |
Cow position: | chr15:36627273-36627685 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 139 |
Conread position: | 74-387 |
Cow position: | chr15:317000-317305 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 208 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 269, 156 |
Conread position: | 74-387 |
Cow position: | chr15:44069122-44068822 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 210 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 75-408 |
Cow position: | chr15:32680216-32680562 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 231 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 67, 157 |
Conread position: | 77-399 |
Cow position: | chr15:37391834-37391517 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 213 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 263, 147 |
Conread position: | 77-425 |
Cow position: | chr15:32495059-32495400 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 235 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 26, 33 |
Conread position: | 77-441 |
Cow position: | chr15:1763416-1763048 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 246 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 167, 116 |
Conread position: | 115-473 |
Cow position: | chr15:10576696-10576362 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 216 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 55, 113 |
Conread position: | 116-442 |
Cow position: | chr15:16506445-16506119 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 229 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 21, 5 |
Conread position: | 172-413 |
Cow position: | chr15:2201715-2201946 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 168 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 180, 56 |
Conread position: | 238-673 |
Cow position: | chr15:12364571-12364138 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 151 |
Conread position: | 285-507 |
Cow position: | chr15:51799609-51799385 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 61, 17 |
Conread position: | 311-661 |
Cow position: | chr15:27064948-27065299 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 98 |
Conread position: | 351-585 |
Cow position: | chr15:684772-684541 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 67, 105 |
Show alignments to all cow chromosomes.