Cow genome map

Conread name: Ss1.1-rcbl0_018774.5

Conread position: 1-379
Cow position:
Alignm length: 387
Alignm identity: 250
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 28

Conread position: 6-376
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 121

Conread position: 6-387
Cow position:
Alignm length: 396
Alignm identity: 253
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 235

Conread position: 6-408
Cow position:
Alignm length: 412
Alignm identity: 258
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 60

Conread position: 6-513
Cow position:
Alignm length: 530
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 234

Conread position: 8-661
Cow position:
Alignm length: 674
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 134

Conread position: 22-225
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 10

Conread position: 25-213
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 25-386
Cow position:
Alignm length: 375
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 171

Conread position: 28-225
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 5

Conread position: 28-414
Cow position:
Alignm length: 395
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 5

Conread position: 29-400
Cow position:
Alignm length: 384
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 80

Conread position: 32-297
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 63

Conread position: 41-401
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 132

Conread position: 43-224
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 124, 58

Conread position: 47-602
Cow position:
Alignm length: 566
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 56

Conread position: 47-654
Cow position:
Alignm length: 617
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 49-372
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 23

Conread position: 51-707
Cow position:
Alignm length: 670
Alignm identity: 431
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 298, 69

Conread position: 54-227
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 160, 75

Conread position: 57-246
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 180, 119

Conread position: 57-384
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 46

Conread position: 57-397
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 16

Conread position: 57-483
Cow position:
Alignm length: 431
Alignm identity: 280
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 117, 53

Conread position: 57-491
Cow position:
Alignm length: 444
Alignm identity: 290
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 69, 55

Conread position: 57-624
Cow position:
Alignm length: 572
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 28

Conread position: 57-658
Cow position:
Alignm length: 612
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 28

Conread position: 57-658
Cow position:
Alignm length: 618
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 169

Conread position: 57-669
Cow position:
Alignm length: 626
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 64-413
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 165

Conread position: 64-462
Cow position:
Alignm length: 401
Alignm identity: 258
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 26

Conread position: 73-387
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 270, 37

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 270, 153

Conread position: 73-387
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 187, 158

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 270, 109

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 270, 131

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 210
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 270, 131

Conread position: 73-388
Cow position:
Alignm length: 322
Alignm identity: 213
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 166, 151

Conread position: 73-398
Cow position:
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 270, 157

Conread position: 73-408
Cow position:
Alignm length: 342
Alignm identity: 220
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 270, 157

Conread position: 74-484
Cow position:
Alignm length: 418
Alignm identity: 270
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 30

Conread position: 76-408
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 176, 40

Conread position: 77-386
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 266, 153

Conread position: 77-387
Cow position:
Alignm length: 316
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 132, 52

Conread position: 77-387
Cow position:
Alignm length: 315
Alignm identity: 204
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 184, 129

Conread position: 77-387
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 266, 149

Conread position: 77-423
Cow position:
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 58

Conread position: 144-408
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 49

Conread position: 150-706
Cow position:
Alignm length: 565
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 43

Conread position: 153-503
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 76

Conread position: 187-661
Cow position:
Alignm length: 490
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 198, 234

Conread position: 189-647
Cow position:
Alignm length: 472
Alignm identity: 305
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 38

Conread position: 194-658
Cow position:
Alignm length: 479
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 266-493
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 143, 0

Conread position: 370-658
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 78

Show alignments to all cow chromosomes.