Cow genome map
| Conread name: | Ss1.1-rcbl0_018774.5 |
| Conread position: | 6-224 |
| Cow position: | chr18:29946066-29945843 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 6-701 |
| Cow position: | chr18:35288107-35287427 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 210 |
| Conread position: | 7-320 |
| Cow position: | chr18:42244699-42245015 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 125 |
| Conread position: | 8-544 |
| Cow position: | chr18:45958549-45958003 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 22-225 |
| Cow position: | chr18:47741838-47741634 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 23-212 |
| Cow position: | chr18:55089106-55089296 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 28-387 |
| Cow position: | chr18:36508147-36507793 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 5 |
| Conread position: | 32-417 |
| Cow position: | chr18:33335682-33335295 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 38-408 |
| Cow position: | chr18:16660202-16660570 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 192, 35 |
| Conread position: | 41-218 |
| Cow position: | chr18:54268356-54268180 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 57-540 |
| Cow position: | chr18:29763270-29762791 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 58-400 |
| Cow position: | chr18:29236561-29236215 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 171, 16 |
| Conread position: | 72-387 |
| Cow position: | chr18:27838534-27838837 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 271, 57 |
| Conread position: | 73-372 |
| Cow position: | chr18:14130062-14129770 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 270, 37 |
| Conread position: | 73-387 |
| Cow position: | chr18:16176838-16177153 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 190 |
| Conread position: | 73-387 |
| Cow position: | chr18:37504834-37504530 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 73-387 |
| Cow position: | chr18:41841057-41841365 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-422 |
| Cow position: | chr18:23797419-23797074 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-611 |
| Cow position: | chr18:43200562-43200032 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 97 |
| Conread position: | 74-399 |
| Cow position: | chr18:54024588-54024918 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 155, 315 |
| Conread position: | 77-226 |
| Cow position: | chr18:14415743-14415595 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 77-387 |
| Cow position: | chr18:28974134-28974437 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 266, 84 |
| Conread position: | 77-408 |
| Cow position: | chr18:25349803-25349480 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 183, 84 |
| Conread position: | 157-703 |
| Cow position: | chr18:16876930-16876408 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 57 |
| Conread position: | 176-539 |
| Cow position: | chr18:18897238-18896875 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 217-367 |
| Cow position: | chr18:40346031-40346181 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 296-621 |
| Cow position: | chr18:42072545-42072870 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 50, 133 |
Show alignments to all cow chromosomes.