Cow genome map
| Conread name: | Ss1.1-rcbl0_018774.5 |
| Conread position: | 6-401 |
| Cow position: | chr19:35376419-35376018 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 232 |
| Conread position: | 6-506 |
| Cow position: | chr19:32223567-32224072 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 184 |
| Conread position: | 6-586 |
| Cow position: | chr19:1492205-1492766 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 367 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 341, 80 |
| Conread position: | 6-653 |
| Cow position: | chr19:20125485-20124860 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 8-214 |
| Cow position: | chr19:15953721-15953511 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 160 |
| Conread position: | 9-656 |
| Cow position: | chr19:6553251-6552600 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 17-387 |
| Cow position: | chr19:55078575-55078214 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 20-400 |
| Cow position: | chr19:34250-33871 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 22-225 |
| Cow position: | chr19:7341897-7341692 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 28-408 |
| Cow position: | chr19:76415-76799 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 33-386 |
| Cow position: | chr19:4385299-4384943 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 41-463 |
| Cow position: | chr19:36477165-36476750 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 157 |
| Conread position: | 54-306 |
| Cow position: | chr19:30754967-30754717 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 57-224 |
| Cow position: | chr19:359700-359871 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 59-433 |
| Cow position: | chr19:261226-260857 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 134 |
| Conread position: | 64-650 |
| Cow position: | chr19:42649286-42649849 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 28 |
| Conread position: | 70-402 |
| Cow position: | chr19:35979044-35978721 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 70-661 |
| Cow position: | chr19:561928-562508 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 112 |
| Conread position: | 73-387 |
| Cow position: | chr19:10672534-10672842 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-387 |
| Cow position: | chr19:33941384-33941081 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 270, 109 |
| Conread position: | 73-408 |
| Cow position: | chr19:40852658-40852988 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-414 |
| Cow position: | chr19:171983-171651 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 76-387 |
| Cow position: | chr19:33873013-33872708 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 264, 154 |
| Conread position: | 93-293 |
| Cow position: | chr19:8229296-8229497 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 98, 132 |
| Conread position: | 125-397 |
| Cow position: | chr19:5681134-5681408 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 7 |
| Conread position: | 130-387 |
| Cow position: | chr19:893845-894096 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 213, 100 |
| Conread position: | 132-464 |
| Cow position: | chr19:15952979-15952664 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 209, 94 |
| Conread position: | 296-658 |
| Cow position: | chr19:30754471-30754125 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 324-708 |
| Cow position: | chr19:8229789-8230178 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 93, 121 |
Show alignments to all cow chromosomes.