Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               2-387
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               64, 5
               

               Conread position:
               6-704
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 109
               

               Conread position:
               8-399
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               10-345
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               11-399
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               13-661
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 118
               

               Conread position:
               17-225
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               174, 16
               

               Conread position:
               20-387
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-404
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               24-407
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               26-225
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               28-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               28-387
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               37, 6
               

               Conread position:
               28-702
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               38-464
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 188
               

               Conread position:
               45-498
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 155
               

               Conread position:
               51-230
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               53-404
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               287, 140
               

               Conread position:
               54-490
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 66
               

               Conread position:
               56-661
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               57-359
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               57-429
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               358, 38
               

               Conread position:
               57-515
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 106
               

               Conread position:
               57-532
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 31
               

               Conread position:
               57-646
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 116
               

               Conread position:
               57-661
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               57-670
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 97
               

               Conread position:
               57-708
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               58-217
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               58-401
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               58-404
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 178
               

               Conread position:
               61-382
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               129, 66
               

               Conread position:
               62-397
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               283, 85
               

               Conread position:
               64-620
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 10
               

               Conread position:
               69-334
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               154, 121
               

               Conread position:
               71-443
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               201, 38
               

               Conread position:
               72-334
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               160, 97
               

               Conread position:
               73-371
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               73-372
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               204, 157
               

               Conread position:
               73-381
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               156, 31
               

               Conread position:
               73-386
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               271, 43
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               233, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               263, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               156, 114
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 266
               

               Conread position:
               73-404
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 93
               

               Conread position:
               73-404
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               156, 121
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               136, 117
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               74-361
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               74-429
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               52, 147
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               77-399
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               152, 85
               

               Conread position:
               77-408
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               266, 147
               

               Conread position:
               77-408
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               131, 116
               

               Conread position:
               79-408
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               150, 107
               

               Conread position:
               87-387
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               256, 89
               

               Conread position:
               87-408
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               157, 5
               

               Conread position:
               89-307
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               112-624
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               341
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               235, 22
               

               Conread position:
               116-399
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               93, 88
               

               Conread position:
               130-443
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               156, 90
               

               Conread position:
               130-508
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 100
               

               Conread position:
               242-433
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               306-582
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               331-624
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 87
               

               Conread position:
               337-658
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               353-708
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               64, 10
               
Show alignments to all cow chromosomes.