Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               5-399
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               140, 61
               

               Conread position:
               6-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               8-387
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 93
               

               Conread position:
               18-387
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               20-418
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               22-387
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               22-666
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               380, 62
               

               Conread position:
               28-408
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               29-225
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               48-484
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 124
               

               Conread position:
               56-658
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               57-219
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               57-226
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               57-415
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 127
               

               Conread position:
               57-418
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               58-515
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               64-231
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-624
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               364
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               73-224
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               270, 83
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               189, 157
               

               Conread position:
               73-388
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               270, 45
               

               Conread position:
               73-404
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               128, 161
               

               Conread position:
               73-418
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               156, 98
               

               Conread position:
               73-421
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               74-399
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               149, 116
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               266, 113
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               266, 153
               

               Conread position:
               77-417
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               200, 15
               

               Conread position:
               90-459
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               107-418
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 83
               

               Conread position:
               118-388
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               137-708
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               391
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               193, 29
               

               Conread position:
               276-578
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               435-654
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               164, 10
               
Show alignments to all cow chromosomes.