Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 204
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 159
               

               Conread position:
               6-399
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 161
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               15-408
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               95, 51
               

               Conread position:
               20-582
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               360
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               27-237
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               36, 5
               

               Conread position:
               29-225
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               29-388
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 206
               

               Conread position:
               29-408
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 86
               

               Conread position:
               38-695
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 149
               

               Conread position:
               45-432
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               48-222
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               57-404
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               57-650
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               394
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               57-677
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               70-216
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               73-363
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               106, 88
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               270, 154
               

               Conread position:
               73-515
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               161, 24
               

               Conread position:
               75-408
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               154, 86
               

               Conread position:
               83-457
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               87-363
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 122
               

               Conread position:
               87-409
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               142, 67
               

               Conread position:
               223-518
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 216
               

               Conread position:
               236-540
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               166, 35
               

               Conread position:
               240-431
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               96, 121
               

               Conread position:
               240-485
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               240-528
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               147, 94
               
Show alignments to all cow chromosomes.