Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               5-408
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               6-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 191
               

               Conread position:
               6-396
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               6-652
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               418
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               8-408
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               14-359
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               15-408
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               20-285
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 117
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               26-225
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               29-284
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 167
               

               Conread position:
               33-371
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 199
               

               Conread position:
               33-382
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               197, 16
               

               Conread position:
               33-425
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               33-658
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 165
               

               Conread position:
               34-408
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 147
               

               Conread position:
               40-405
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               51-387
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               51-440
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               57-344
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               57-408
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               179, 30
               

               Conread position:
               64-484
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 40
               

               Conread position:
               64-633
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 30
               

               Conread position:
               67-673
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 88
               

               Conread position:
               73-369
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               73-376
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               274, 25
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               270, 62
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 159
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               270, 82
               

               Conread position:
               73-411
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               74-399
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               155, 36
               

               Conread position:
               77-399
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               115, 201
               

               Conread position:
               79-387
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               264, 110
               

               Conread position:
               130-434
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               181, 60
               

               Conread position:
               203-661
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               254-475
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.