Cow genome map
| Conread name: | Ss1.1-rcbl0_018774.5 |
| Conread position: | 6-400 |
| Cow position: | chr23:5875007-5875394 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 146, 60 |
| Conread position: | 6-453 |
| Cow position: | chr23:3013397-3012945 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 6-707 |
| Cow position: | chr23:16617086-16617797 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 184 |
| Conread position: | 8-388 |
| Cow position: | chr23:988878-989260 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 8-581 |
| Cow position: | chr23:3490748-3491331 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 192 |
| Conread position: | 31-159 |
| Cow position: | chr23:16481631-16481761 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 33-387 |
| Cow position: | chr23:11778203-11777856 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 36-372 |
| Cow position: | chr23:2716066-2715721 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 43-408 |
| Cow position: | chr23:34174893-34174545 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 54-359 |
| Cow position: | chr23:2768511-2768808 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 57-223 |
| Cow position: | chr23:31652152-31652310 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 57-261 |
| Cow position: | chr23:22875937-22876140 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 57-443 |
| Cow position: | chr23:2340098-2339723 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 162 |
| Conread position: | 59-400 |
| Cow position: | chr23:1025361-1025698 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 170, 16 |
| Conread position: | 65-420 |
| Cow position: | chr23:19449707-19449361 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 65-493 |
| Cow position: | chr23:19332717-19333144 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 73-372 |
| Cow position: | chr23:15176727-15176440 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 270, 109 |
| Conread position: | 73-372 |
| Cow position: | chr23:22147583-22147894 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 144, 205 |
| Conread position: | 73-387 |
| Cow position: | chr23:2795886-2796188 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 204, 154 |
| Conread position: | 73-387 |
| Cow position: | chr23:4640949-4641252 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 270, 96 |
| Conread position: | 73-387 |
| Cow position: | chr23:15220217-15220525 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-387 |
| Cow position: | chr23:19489216-19488900 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 153, 187 |
| Conread position: | 73-387 |
| Cow position: | chr23:28913088-28912781 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 73-408 |
| Cow position: | chr23:2027450-2027779 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 267, 100 |
| Conread position: | 73-417 |
| Cow position: | chr23:3882019-3882353 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 77-373 |
| Cow position: | chr23:1141241-1140948 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 185 |
| Conread position: | 77-388 |
| Cow position: | chr23:36031698-36032003 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 266, 153 |
| Conread position: | 112-429 |
| Cow position: | chr23:949370-949680 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 151-642 |
| Cow position: | chr23:16481954-16482436 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 252-708 |
| Cow position: | chr23:22879658-22880128 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 198 |
| Conread position: | 253-670 |
| Cow position: | chr23:29153842-29154261 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 269-540 |
| Cow position: | chr23:7749652-7749388 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 8 |
Show alignments to all cow chromosomes.