Cow genome map
| Conread name: | Ss1.1-rcbl0_018774.5 |
| Conread position: | 7-695 |
| Cow position: | chr27:25999291-25999984 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 8-656 |
| Cow position: | chr27:3996613-3997275 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 440 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 322 |
| Conread position: | 18-398 |
| Cow position: | chr27:14460724-14461099 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 48-398 |
| Cow position: | chr27:25116957-25116606 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 148 |
| Conread position: | 51-416 |
| Cow position: | chr27:26556279-26556648 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 57-429 |
| Cow position: | chr27:5906724-5906361 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 57-443 |
| Cow position: | chr27:21288519-21288905 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 118, 172 |
| Conread position: | 57-579 |
| Cow position: | chr27:6006698-6006198 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 101, 177 |
| Conread position: | 73-373 |
| Cow position: | chr27:5910543-5910251 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 73-387 |
| Cow position: | chr27:23334839-23334532 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 270, 66 |
| Conread position: | 73-387 |
| Cow position: | chr27:26324490-26324183 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 270, 157 |
| Conread position: | 73-402 |
| Cow position: | chr27:9993516-9993838 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 270, 57 |
| Conread position: | 77-387 |
| Cow position: | chr27:27662566-27662262 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 266, 153 |
| Conread position: | 77-399 |
| Cow position: | chr27:11471719-11472036 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 154 |
| Conread position: | 97-387 |
| Cow position: | chr27:15638858-15639142 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 246, 133 |
| Conread position: | 107-483 |
| Cow position: | chr27:27414239-27413864 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 175 |
| Conread position: | 149-484 |
| Cow position: | chr27:11963376-11963044 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 192, 54 |
| Conread position: | 152-658 |
| Cow position: | chr27:27198231-27198748 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 348 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 56, 72 |
Show alignments to all cow chromosomes.