Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               2-209
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               5-659
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               7-387
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 178
               

               Conread position:
               7-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 176
               

               Conread position:
               8-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 134
               

               Conread position:
               8-624
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 204
               

               Conread position:
               15-429
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               17-225
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               17-416
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               18-211
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               18-388
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               20-386
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               46, 218
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-233
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-387
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               22-387
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               29-404
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               11, 170
               

               Conread position:
               32-416
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 194
               

               Conread position:
               36-431
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               301, 18
               

               Conread position:
               38-707
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               39-583
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               42-404
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               32, 148
               

               Conread position:
               51-414
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 15
               

               Conread position:
               54-407
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               54-490
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               57-218
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               57-226
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               145, 113
               

               Conread position:
               57-433
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               290, 31
               

               Conread position:
               57-459
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 133
               

               Conread position:
               57-624
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 112
               

               Conread position:
               57-626
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               57-658
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 156
               

               Conread position:
               57-661
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 72
               

               Conread position:
               57-703
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               58-584
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 166
               

               Conread position:
               59-626
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 103
               

               Conread position:
               64-400
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               139, 105
               

               Conread position:
               73-224
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-281
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               73-360
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               162, 110
               

               Conread position:
               73-372
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               280, 151
               

               Conread position:
               73-386
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-386
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               270, 103
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 156
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 17
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               270, 153
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               238, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               270, 109
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               150, 43
               

               Conread position:
               73-404
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               251, 157
               

               Conread position:
               73-404
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               270, 114
               

               Conread position:
               73-421
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               267, 113
               

               Conread position:
               73-422
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 88
               

               Conread position:
               73-425
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-488
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 12
               

               Conread position:
               74-388
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               75-400
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               161, 80
               

               Conread position:
               78-506
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               106, 155
               

               Conread position:
               92-515
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               143, 63
               

               Conread position:
               106-397
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               229, 84
               

               Conread position:
               112-415
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               231, 14
               

               Conread position:
               153-661
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               162-529
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               166-703
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               168-515
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 230
               

               Conread position:
               174-703
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 282
               

               Conread position:
               185-535
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               200-515
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               145, 6
               
Show alignments to all cow chromosomes.