Cow genome map

Conread name: Ss1.1-rcbl0_018774.5

Conread position: 6-218
Cow position: chr4:11383908-11383694 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 55, 99

Conread position: 6-225
Cow position: chr4:30307956-30308177 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 168

Conread position: 6-407
Cow position: chr4:39272442-39272861 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 100

Conread position: 7-214
Cow position: chr4:54190358-54190144 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 105

Conread position: 8-415
Cow position: chr4:60630753-60631163 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 277
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 205

Conread position: 9-367
Cow position: chr4:6215078-6215417 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 33

Conread position: 13-387
Cow position: chr4:51044396-51044785 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 104

Conread position: 17-408
Cow position: chr4:21338515-21338908 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 259
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 19

Conread position: 20-387
Cow position: chr4:46712858-46713232 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 223

Conread position: 20-408
Cow position: chr4:1371527-1371905 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 77

Conread position: 22-225
Cow position: chr4:3125241-3125037 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 12

Conread position: 22-425
Cow position: chr4:24445739-24446138 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 258
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 11

Conread position: 27-261
Cow position: chr4:1464465-1464695 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 6

Conread position: 28-387
Cow position: chr4:355368-355016 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 5

Conread position: 28-387
Cow position: chr4:3358179-3357829 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 5

Conread position: 28-387
Cow position: chr4:41118581-41118227 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 5

Conread position: 38-413
Cow position: chr4:40824800-40825176 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 196

Conread position: 51-399
Cow position: chr4:8598701-8599033 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 136

Conread position: 51-519
Cow position: chr4:58883240-58883701 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 16, 53

Conread position: 57-225
Cow position: chr4:6269197-6269365 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 57-476
Cow position: chr4:21359087-21358679 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 31

Conread position: 57-482
Cow position: chr4:15193437-15193030 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 46, 52

Conread position: 58-415
Cow position: chr4:60673337-60672980 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 143

Conread position: 65-407
Cow position: chr4:30283111-30282778 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 178, 114

Conread position: 65-443
Cow position: chr4:41428040-41427667 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 241
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 137, 61

Conread position: 71-443
Cow position: chr4:22471620-22471275 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 46

Conread position: 71-499
Cow position: chr4:15263545-15263961 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 283
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 45

Conread position: 73-387
Cow position: chr4:3961004-3960696 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 270, 148

Conread position: 73-387
Cow position: chr4:6490938-6491245 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 263, 157

Conread position: 73-387
Cow position: chr4:13491984-13491673 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 160

Conread position: 73-387
Cow position: chr4:18516304-18515989 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 159, 192

Conread position: 73-387
Cow position: chr4:36895782-36895474 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position: chr4:43320228-43320536 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position: chr4:43880518-43880211 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 270, 133

Conread position: 73-387
Cow position: chr4:44724491-44724192 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 73-387
Cow position: chr4:45049887-45050195 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position: chr4:48025810-48025506 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 270, 120

Conread position: 73-387
Cow position: chr4:57978825-57978523 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 187, 130

Conread position: 73-388
Cow position: chr4:25600192-25600501 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 270, 157

Conread position: 73-399
Cow position: chr4:1050212-1050532 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 159

Conread position: 73-408
Cow position: chr4:41330848-41330516 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 136, 120

Conread position: 74-222
Cow position: chr4:6449472-6449624 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 120

Conread position: 75-404
Cow position: chr4:34185444-34185773 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 15

Conread position: 77-387
Cow position: chr4:33073980-33074280 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 266, 136

Conread position: 77-388
Cow position: chr4:29532310-29532615 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 266, 153

Conread position: 77-425
Cow position: chr4:33493215-33492871 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 130

Conread position: 81-408
Cow position: chr4:28830440-28830126 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 148, 17

Conread position: 90-525
Cow position: chr4:54955364-54954918 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 268

Conread position: 118-402
Cow position: chr4:17531304-17531585 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 111

Conread position: 130-629
Cow position: chr4:21564333-21563825 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 157

Show alignments to all cow chromosomes.