Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               5-387
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               5-599
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 93
               

               Conread position:
               6-286
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               6-302
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               6-488
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               156, 56
               

               Conread position:
               6-708
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 42
               

               Conread position:
               7-332
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 108
               

               Conread position:
               8-254
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               8-515
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               345
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 87
               

               Conread position:
               9-407
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               16-660
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 212
               

               Conread position:
               17-556
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               20-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               28-388
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               181, 5
               

               Conread position:
               28-408
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               28-408
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               31-708
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 18
               

               Conread position:
               32-387
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 152
               

               Conread position:
               33-387
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               310, 39
               

               Conread position:
               33-397
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               33-413
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               33-508
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 18
               

               Conread position:
               40-388
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               51-366
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               53-397
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               54-399
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 173
               

               Conread position:
               54-541
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               56-623
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 121
               

               Conread position:
               57-404
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               179, 17
               

               Conread position:
               58-429
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               59-408
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               173, 118
               

               Conread position:
               61-656
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 38
               

               Conread position:
               65-428
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               204, 82
               

               Conread position:
               70-307
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               70-384
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               73-371
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               270, 120
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               270, 130
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               136, 120
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               175, 48
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               156, 99
               

               Conread position:
               73-418
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               6, 114
               

               Conread position:
               73-431
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               74-408
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               269, 139
               

               Conread position:
               77-381
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               152, 116
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               266, 149
               

               Conread position:
               87-408
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               90-478
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               107-433
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               236, 41
               

               Conread position:
               112-540
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 116
               

               Conread position:
               116-442
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               153, 82
               

               Conread position:
               132-658
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               242-486
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 68
               

               Conread position:
               340-520
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               378-679
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               413-677
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               122, 33
               
Show alignments to all cow chromosomes.