Cow genome map

Conread name: Ss1.1-rcbl0_018774.5

Conread position: 1-269
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 23

Conread position: 5-680
Cow position:
Alignm length: 695
Alignm identity: 443
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 77

Conread position: 8-224
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 8-225
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 24

Conread position: 8-429
Cow position:
Alignm length: 437
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 197

Conread position: 9-345
Cow position:
Alignm length: 353
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 182

Conread position: 14-307
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 151

Conread position: 19-387
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 47

Conread position: 20-370
Cow position:
Alignm length: 356
Alignm identity: 227
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 12

Conread position: 22-225
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 11

Conread position: 22-225
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 11

Conread position: 22-225
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 12

Conread position: 22-225
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 10

Conread position: 22-387
Cow position:
Alignm length: 371
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 11

Conread position: 22-387
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 11

Conread position: 28-408
Cow position:
Alignm length: 391
Alignm identity: 259
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 8

Conread position: 31-519
Cow position:
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 17

Conread position: 32-366
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 26

Conread position: 32-404
Cow position:
Alignm length: 383
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 40

Conread position: 33-333
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 200, 37

Conread position: 33-386
Cow position:
Alignm length: 359
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 79

Conread position: 33-387
Cow position:
Alignm length: 362
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 23

Conread position: 33-388
Cow position:
Alignm length: 364
Alignm identity: 233
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 15

Conread position: 35-582
Cow position:
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 38-394
Cow position:
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 68

Conread position: 40-225
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 64

Conread position: 47-492
Cow position:
Alignm length: 452
Alignm identity: 292
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 89

Conread position: 49-400
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 58

Conread position: 53-700
Cow position:
Alignm length: 669
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 83

Conread position: 54-584
Cow position:
Alignm length: 536
Alignm identity: 337
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 292, 114

Conread position: 57-341
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 54

Conread position: 57-482
Cow position:
Alignm length: 433
Alignm identity: 278
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 262, 141

Conread position: 58-386
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 285, 13

Conread position: 60-623
Cow position:
Alignm length: 569
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 154

Conread position: 63-413
Cow position:
Alignm length: 353
Alignm identity: 225
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 241, 5

Conread position: 70-286
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 63

Conread position: 70-385
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 165, 83

Conread position: 71-407
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 72-387
Cow position:
Alignm length: 319
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 271, 77

Conread position: 73-371
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 156, 56

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 270, 96

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 270, 157

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 205
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 270, 103

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 270, 120

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 270, 56

Conread position: 73-387
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 157

Conread position: 73-387
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 270, 37

Conread position: 73-387
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 37

Conread position: 73-387
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 225, 45

Conread position: 73-387
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 225, 45

Conread position: 73-388
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 270, 157

Conread position: 73-399
Cow position:
Alignm length: 335
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 156, 0

Conread position: 73-408
Cow position:
Alignm length: 342
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 270, 157

Conread position: 73-422
Cow position:
Alignm length: 357
Alignm identity: 232
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 270, 51

Conread position: 73-425
Cow position:
Alignm length: 357
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 270, 157

Conread position: 74-408
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 162

Conread position: 77-387
Cow position:
Alignm length: 314
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 266, 116

Conread position: 77-387
Cow position:
Alignm length: 316
Alignm identity: 208
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 33

Conread position: 87-661
Cow position:
Alignm length: 588
Alignm identity: 374
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 16

Conread position: 116-520
Cow position:
Alignm length: 412
Alignm identity: 277
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 29

Conread position: 120-402
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 88

Conread position: 249-658
Cow position:
Alignm length: 427
Alignm identity: 277
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 59

Conread position: 277-484
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 46

Conread position: 364-658
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 43

Show alignments to all cow chromosomes.