Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               5-408
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               130, 62
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               169, 72
               

               Conread position:
               6-443
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               54, 136
               

               Conread position:
               7-305
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 188
               

               Conread position:
               8-387
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               9-436
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               51, 194
               

               Conread position:
               16-371
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               17-400
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               21-413
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               41, 177
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               22-341
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               22-386
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               22-408
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               25-508
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               28-199
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               28-408
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               32-625
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               32-704
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               38-183
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               43-387
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               201, 23
               

               Conread position:
               43-481
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               292, 14
               

               Conread position:
               45-226
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               56-401
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 16
               

               Conread position:
               57-224
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               57-306
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               57-397
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               57-413
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               57-707
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 167
               

               Conread position:
               57-708
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               443, 51
               

               Conread position:
               64-623
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               73-215
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               73-366
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               73-381
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 140
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               270, 109
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               270, 140
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               270, 25
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               187, 116
               

               Conread position:
               77-306
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 99
               

               Conread position:
               77-379
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               264, 109
               

               Conread position:
               80-443
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               179, 104
               

               Conread position:
               87-411
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               253, 135
               

               Conread position:
               90-436
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               112-399
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               229, 83
               

               Conread position:
               112-400
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               224, 49
               

               Conread position:
               132-369
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               143-488
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               196, 84
               

               Conread position:
               204-397
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               219-408
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               225-515
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               230-661
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               242-658
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 66
               

               Conread position:
               244-669
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               173, 201
               

               Conread position:
               323-579
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 127
               

               Conread position:
               330-670
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 116
               
Show alignments to all cow chromosomes.